cluster # 2667

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Anopheles gambiae
cluster # 2667 cluster # 2667 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2667#0 length = 665 sequences # 1

consensus_2667#1 length = 636 sequences # 1

consensusID : consensus_2667#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence

                              [CCGGGTTTTTGTGCACACCGGCTAGAACGGAGTGGAAAAAAGCGCCGGAAACCAATCGATAAACGCGCACGATGGGTTTGCTAACGAATCCATCCATTTCGCAAAAGGCTAAATATTGCCGCAAGCTGGTCCGCTACAATACGGCCATCTGTCTGACGCTGTATCTGCTGGGCGTTGGCTTTTTCTGCGCCCTGCCGGATGCCAACTTTAACTCCGGCACCTACTTTTCCGAGAATGCGCTACTGCCGGGACTGGTAAACTCCGAGCTGGAGATGGAAACGGTCAATCTGGTCAAATCGCTGTCCGGTGAGTTGCAACGGGAGCGGGAAAACTACCCGAAAGGGATGCCGTACCCGTGGCTGCTGGCAAAGATGCGACGGTTCGGGCTGGAGACACACACGCACAACTTTACGCTCAACTATCCGTTCGGGGGTGGAAAGCGCTTTAAAGGTGAAAACGTGTACGGCATACTGCGCGCCCCGCGCATTGCATCCACAGAAGCGATTGTGATAAGCGTACCCTATCGGCCACCGGAAACCGTCCACACGGACGTTTCGGCCGGTGTGCCGTTAATGCTCGCGTTCGCCGATTTTGCCCGCCGCAAGAAGTACTGGGCGAAGGACATTATTTTTCCTCGTCACCGAGCAGGAGCAGCTGGGAATGCA]

[+] EMBL BM592312             [CCGGGTTTTTGTGCACACCGGCTAGAACGGAGTGGAAAAAAGCGCCGGAAACCAATCGATAAACGCGCACGATGGGTTTGCTAACGAATCCATCCATTTCGCAAAAGGCTAAATATTGCCGCAAGCTGGTCCGCTACAATACGGCCATCTGTCTGACGCTGTATCTGCTGGGCGTTGGCTTTTTCTGCGCCCTGCCGGATGCCAACTTTAACTCCGGCACCTACTTTTCCGAGAATGCGCTACTGCCGGGACTGGTAAACTCCGAGCTGGAGATGGAAACGGTCAATCTGGTCAAATCGCTGTCCGGTGAGTTGCAACGGGAGCGGGAAAACTACCCGAAAGGGATGCCGTACCCGTGGCTGCTGGCAAAGATGCGACGGTTCGGGCTGGAGACACACACGCACAACTTTACGCTCAACTATCCGTTCGGGGGTGGAAAGCGCTTTAAAGGTGAAAACGTGTACGGCATACTGCGCGCCCCGCGCATTGCATCCACAGAAGCGATTGTGATAAGCGTACCCTATCGGCCACCGGAAACCGTCCACACGGACGTTTCGGCCGGTGTGCCGTTAATGCTCGCGTTCGCCGATTTTGCCCGCCGCAAGAAGTACTGGGCGAAGGACATTATTTTTCCTCGTCACCGAGCAGGAGCAGCTGGGAATGCA]




>consensus_2667#0
CCGGGTTTTTGTGCACACCGGCTAGAACGGAGTGGAAAAAAGCGCCGGAAACCAATCGAT
AAACGCGCACGATGGGTTTGCTAACGAATCCATCCATTTCGCAAAAGGCTAAATATTGCC
GCAAGCTGGTCCGCTACAATACGGCCATCTGTCTGACGCTGTATCTGCTGGGCGTTGGCT
TTTTCTGCGCCCTGCCGGATGCCAACTTTAACTCCGGCACCTACTTTTCCGAGAATGCGC
TACTGCCGGGACTGGTAAACTCCGAGCTGGAGATGGAAACGGTCAATCTGGTCAAATCGC
TGTCCGGTGAGTTGCAACGGGAGCGGGAAAACTACCCGAAAGGGATGCCGTACCCGTGGC
TGCTGGCAAAGATGCGACGGTTCGGGCTGGAGACACACACGCACAACTTTACGCTCAACT
ATCCGTTCGGGGGTGGAAAGCGCTTTAAAGGTGAAAACGTGTACGGCATACTGCGCGCCC
CGCGCATTGCATCCACAGAAGCGATTGTGATAAGCGTACCCTATCGGCCACCGGAAACCG
TCCACACGGACGTTTCGGCCGGTGTGCCGTTAATGCTCGCGTTCGCCGATTTTGCCCGCC
GCAAGAAGTACTGGGCGAAGGACATTATTTTTCCTCGTCACCGAGCAGGAGCAGCTGGGA
ATGCA

consensusID : consensus_2667#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence

                              [CCGCCCACGCGTCCGCGTTAATGCTAGCGTTCGCCGATTTTGCCCGCCGCAAGAAGTACTGGGCGAAGGACATTATTTTCCTCGTCACCGAGCAGGAGCAGCTGGGAATGCAGGCCTGGCTGGAGGCGTACCATGGCGGCGACGAGGGGCGCATTCTCGATTCGGGACTGTTGCGTGCTCGGGCCGGCTCCATCCAAGCAGCCCTCAATCTGGAAGTGCAAAGTTTGGACATTAGTCATATAAACTTAAAAATTGAAGGACTCAACGGACAGCTTCCCAATCTGGACCTTCACAATCTGGTGCAGAAACTTTCGTCGAAGAATGGCATAATAGCGGGATACAAACAATCCTCCTCCAGCCCGAAACGATCCTTCCGCTACCAGGACAAGCTGCTCAATCTGCTGTCGATGGTGTTTTCGCAGGCGAGCGGCGTACCGACGGGAAATCATGGTCTTTTCCACAAGTACGGCATCGAAGCGCTAACGCTCGAAGCGGTCAAGCGGGAACGGACGCAGCAGCAGCAGTTTCAGGAGGTCGGTTCGATGCTGCGCATCATCGAGGGAATTAGCCGCAGCTTGAACAATCTGCTGGAGCGCTTTCATCAGAGCTTTTCTTCTATCTGCTCGTCTCGAACGA]

[+] EMBL BM617268             [CCGCCCACGCGTCCGCGTTAATGCTAGCGTTCGCCGATTTTGCCCGCCGCAAGAAGTACTGGGCGAAGGACATTATTTTCCTCGTCACCGAGCAGGAGCAGCTGGGAATGCAGGCCTGGCTGGAGGCGTACCATGGCGGCGACGAGGGGCGCATTCTCGATTCGGGACTGTTGCGTGCTCGGGCCGGCTCCATCCAAGCAGCCCTCAATCTGGAAGTGCAAAGTTTGGACATTAGTCATATAAACTTAAAAATTGAAGGACTCAACGGACAGCTTCCCAATCTGGACCTTCACAATCTGGTGCAGAAACTTTCGTCGAAGAATGGCATAATAGCGGGATACAAACAATCCTCCTCCAGCCCGAAACGATCCTTCCGCTACCAGGACAAGCTGCTCAATCTGCTGTCGATGGTGTTTTCGCAGGCGAGCGGCGTACCGACGGGAAATCATGGTCTTTTCCACAAGTACGGCATCGAAGCGCTAACGCTCGAAGCGGTCAAGCGGGAACGGACGCAGCAGCAGCAGTTTCAGGAGGTCGGTTCGATGCTGCGCATCATCGAGGGAATTAGCCGCAGCTTGAACAATCTGCTGGAGCGCTTTCATCAGAGCTTTTCTTCTATCTGCTCGTCTCGAACGA]




>consensus_2667#1
CCGCCCACGCGTCCGCGTTAATGCTAGCGTTCGCCGATTTTGCCCGCCGCAAGAAGTACT
GGGCGAAGGACATTATTTTCCTCGTCACCGAGCAGGAGCAGCTGGGAATGCAGGCCTGGC
TGGAGGCGTACCATGGCGGCGACGAGGGGCGCATTCTCGATTCGGGACTGTTGCGTGCTC
GGGCCGGCTCCATCCAAGCAGCCCTCAATCTGGAAGTGCAAAGTTTGGACATTAGTCATA
TAAACTTAAAAATTGAAGGACTCAACGGACAGCTTCCCAATCTGGACCTTCACAATCTGG
TGCAGAAACTTTCGTCGAAGAATGGCATAATAGCGGGATACAAACAATCCTCCTCCAGCC
CGAAACGATCCTTCCGCTACCAGGACAAGCTGCTCAATCTGCTGTCGATGGTGTTTTCGC
AGGCGAGCGGCGTACCGACGGGAAATCATGGTCTTTTCCACAAGTACGGCATCGAAGCGC
TAACGCTCGAAGCGGTCAAGCGGGAACGGACGCAGCAGCAGCAGTTTCAGGAGGTCGGTT
CGATGCTGCGCATCATCGAGGGAATTAGCCGCAGCTTGAACAATCTGCTGGAGCGCTTTC
ATCAGAGCTTTTCTTCTATCTGCTCGTCTCGAACGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2667#0      CCGGGTTTTTGTGCACACCGGCTAGAACGGAGTGGAAAAAAGCGCCGGAAACCAATCGAT 60
consensus_2667#1      ------------------CCGCCCACGCGTCCGCGTTAATGCTAGCGTTCGCCGATTTTG 42
                                        * **     **     *  **      **    ** **    

consensus_2667#0      AAACGCGCACGATGGGTTTGCTAACGAAT-CCATCCATTTCGCAAAAGGCTAAATATTGC 119
consensus_2667#1      CCCGCCGCAAGAAGTACTGGGCGAAGGACATTATTTTCCTCGTCACCGAGCAGGAGCAGC 102
                           **** ** *   * *   * * *    **     ***  *  *   *      **

consensus_2667#0      CGCAA--GCTGGTCCGCTACAATACG-GCCATCTGTCTGACGCTGTATCTGCTGGGCGTT 176
consensus_2667#1      TGGGAATGCAGGCCTGGCTGGAGGCGTACCATGGCGGCGACGAGGGGCGCATTCTCGATT 162
                       *  *  ** ** * *     *  **  ****      ****  *       *     **

consensus_2667#0      GGCTTTTTCTGCGCCCTGCCGGATGCCAACTTTAACTCCGGCACCTACTTTTCCGAGAAT 236
consensus_2667#1      CGGGACTGTTGCGTGCT--CGG--GCCGGCTCCATC-CAAGCAGCCCTCAATCTGGAAGT 217
                       *    *  ****  **  ***  ***  **  * * *  *** *      ** *  * *

consensus_2667#0      GCGCTACTGCCGGGACTGGTAAACTCCGAGCTGGAGATGGAAACGGTCAATCTGGTCAAA 296
consensus_2667#1      GCAA-AGTTTGGACATTAGTCA-TATAAACTTAAAAATTGAAGGACTCAA-CGGACAGCT 274
                      **   * *   *  * * ** *      *  *  * ** ***    **** * *      

consensus_2667#0      TCGCTGTCCGGTGAGTTGCAACGGGAGCGGGAAAACTACCCGAAAGGGATGCCGTACCCG 356
consensus_2667#1      TCCCAATCTGGACCTTCACAATCTG-GTGCAGAAACTTTCGTCGAAGAATGGCATAATAG 333
                      ** *  ** **    *  ***   * * *   *****  *    * * *** * **   *

consensus_2667#0      TGGCTGCTGGCAAAGATGCGACGGTTCGGGCTGGAGACACACACGCACAACTTTACGCTC 416
consensus_2667#1      CGG-----GATACAAACAATCCTCCTCCAGCCCGAAACG-ATCCTTCCGCTACCAGGACA 387
                       **     *  * * *     *   **  **  ** **  *  *   *      * *   

consensus_2667#0      AACTATCCGTTCGGGGGTGGAAAGCGCTTTAAAGGTGAAAACGTGTACGGCATACTGCGC 476
consensus_2667#1      AGCTGCTCAATCTGCTGTCGATGGTGTTTTCGCAGGCGAGCGGCGTACCG---ACGGGAA 444
                      * **   *  ** *  ** **  * * ***    *   *   * **** *   ** *   

consensus_2667#0      GCCCCGCGCATTGCATCCACAGAAGCGATTGTGATAAGCGTACCCT---ATCGGCCACCG 533
consensus_2667#1      ATCATGGTCTTT---TCCACAAGTACGGCATCGAAGCGCTAACGCTCGAAGCGGTCAAGC 501
                        *  *  * **   ******    **     **   **  ** **   * *** **   

consensus_2667#0      GAAACCGTCCACA----CGGACGTTTCGGCCGGTGTGC-CGTTAATGCTCGCGTTCGCCG 588
consensus_2667#1      GGGAACGGACGCAGCAGCAGCAGTTTCAGGAGGTCGGTTCGATGCTGCGCATCATCGAGG 561
                      *  * **  * **    * *  ***** *  ***  *  ** *  *** *    ***  *

consensus_2667#0      ATTTTGCCCGCCGCAAGAAGTACTGGGCGAAGGACATT-ATTTTTCCTCGTCACCGAGCA 647
consensus_2667#1      GAATTAGCCGCAGCTTGAACAATCTGCTGGAGCGCTTTCATCAGAGCTTTTCTTCTATCT 621
                         **  **** **  ***  *   *  * **  * ** **     **  **  * * * 

consensus_2667#0      GGAGCAGCTGGGAATGCA 665
consensus_2667#1      GC--TCGTCTCGAACGA- 636
                      *     *    *** *