cluster # 268

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 268 cluster # 268 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_268#0 length = 120 sequences # 1

consensus_268#1 length = 112 sequences # 1

consensusID : consensus_268#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 120
fasta sequence

                              [GACAGCTACTGCAAGGCGGCCTACCCGGCCGCCCCGGTAGCCCACACGTACGCTGCCCACGCCCGGCACGTTAAGTGCGGGGCTAACCTGCTGGTCGGCTGCGCCCCCAACGTTGGCCAC]

[+] EMBL BM591216             [GACAGCTACTGCAAGGCGGCCTACCCGGCCGCCCCGGTAGCCCACACGTACGCTGCCCACGCCCGGCACGTTAAGTGCGGGGCTAACCTGCTGGTCGGCTGCGCCCCCAACGTTGGCCAC]




>consensus_268#0
GACAGCTACTGCAAGGCGGCCTACCCGGCCGCCCCGGTAGCCCACACGTACGCTGCCCAC
GCCCGGCACGTTAAGTGCGGGGCTAACCTGCTGGTCGGCTGCGCCCCCAACGTTGGCCAC

consensusID : consensus_268#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 112
fasta sequence

                              [ACGGTAACACCAGTGGGGGAGCATTTGGGTCCCATGAGGGCTGCCAATCGTACCCGTGCGATGGGGGCAAAAAATCGGGAGAATCCAATGATACCCCGCGGTGGGCGCGCTT]

[+] EMBL BX605040             [ACGGTAACACCAGTGGGGGAGCATTTGGGTCCCATGAGGGCTGCCAATCGTACCCGTGCGATGGGGGCAAAAAATCGGGAGAATCCAATGATACCCCGCGGTGGGCGCGCTT]




>consensus_268#1
ACGGTAACACCAGTGGGGGAGCATTTGGGTCCCATGAGGGCTGCCAATCGTACCCGTGCG
ATGGGGGCAAAAAATCGGGAGAATCCAATGATACCCCGCGGTGGGCGCGCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_268#0      GACAGCTACTGCAA-GGCGGCCTACCCGGCCGCCCCGGTAGCCCACACGTACGCTGCCCA 59
consensus_268#1      -ACGGTAACACCAGTGGGGGAGCATTTGGGTCCCATGAGGGCTGCCA---ATCGTACCCG 56
                      ** *  **  **  ** **   *   **   **  *   **   **   *   * *** 

consensus_268#0      CGCCCGGCACGTTAAGTGCGGGGCTAACCTGCTGGTCGGCTGCGCCCCCAACGTTGGCCA 119
consensus_268#1      TGCGATGGGGGCAAAAAATCGGGAGAATCCAATGATACCCCGCGGTGGGCGCGCTT---- 112
                      **   *   *  **     ***  ** *   ** *   * ***       ** *     

consensus_268#0      C 120
consensus_268#1      -