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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2692#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2186 fasta sequence
[GAAGATCGCTGCAGTCCCCAGAGTGCTCCTAGTCCACCGCATCATCACCACAGTAGCCAGAGCCCGACGAGCACGACCACGGTTACGATGGCAACGGCAAGTCCTGTGCCCGCCTGCACCACCACCACCAGCACCACCAGCACCTCTGGCGCTAGCGCGGCTAGTTCGCCTACCCGCGACGAGATGTCCGTAGTGGTACCGATCTCTCCGCTGCACATCAAGCAGGAACCGCTCGGCAGCGATGGACCGATGCCAGCGCAGCCACCTCACCACCACCAGCATCCCCACCACCACCAGCTACCCCATCATCCCCATCATCAGCATCATCCGCAGCAGCAGCCCTCCCCGCAGACCTCCCCGCCCGCCAGCATATCCTTTTCCATCACCAACATCCTGAGCGATCGGTTTGGCAAGGCAACGGCCGAACAGCAGCAGCAGCCCCATCCGCAATCTCCTGCCATCCGCGAACCGATCAGCCCCGGACCGATCCATCCCGCGGTGCTCCTGCCCTACCCACAGCACGTGCTCCACCCAGCGCATCATCCGGCCCTGCTCCATCCAGCGTACCACACCGGCCTTCACCATTACTACCAGCCGTCGCCATCGCATCCACAGCCGATTGTGCCCCAGCCTCAGCGAGCGTCTCTGGAGCGAAGGGACAGTCTGTTCCGGCCGTACGACATCAGCAAAAGTCCGCGCCTTTGCAGCAGCAATGGAAGCAGCTCGGCCACCCCTCTGCCCCTCCATCCGTACCACACGGACAGCGATTGCTCGACGCAGGATTCAACGTCCGCCCCGAGTCCCGCCACGTACGGTGATATCGCTTCGCCCTCGTCCGCCTCCTCCGCCATGACCACGCCGGCCACTACCAGCAGTCCCACGGGCAGTGTGTACGACTATAGCCGCAAAGCGAGCGCCCTGGACCATCGAGCCGCGCTGCTGAATGGATTCAGTGCAGCCGCCAGCTACCCCAAACTCCACGAAGAGATCATCAACAGGCCACCGCAAGTTCCAGGCGAACGTGATCGAATCGCAAACGAAGGCGGCACTGGCTGCGGCAGCCACGGCTGCTGCGGCGGCGCTTCCGCGACACCCCACAACATGCCACCGCTGGGCAGTTTGTGCAAGACGGTGTCACAGATCGGACAGCATGTGGCCGGTACGGGCAGCTTGAACGGATCGGGCAGTGCAACGAATGGGGCGTCGAATGGTGGTTCCGGTGCTCCGGCCACTGCCAAACCAACGCCAAAGCCCATCCCAAAACCAGCGCCGAGCTCGGAAACCAATGGTTCCTCGTCGCAGGAGCGTGGCATGGAGTCGTCGGACGATGCGAAGTCGGAAACGAGCAGCACCAAGGATGGAAGCGAAAATGGCAGCAATCTGTGGCCGGCCTGGGTGTACTGCACGCGGTACAGCGATCGTCCAAGCTCTGGTCCTCGCTACAGACGCACGAAGCAACCGAAGAAAAGGGCGGACAGTGAGGAGAAGCGCCCACGAACAGCCTTTTCCAATGCGCAACTGCAAAGACTGAAGAATGAGTTCAACGAAAATCGCTATCTGACGGAAAAGCGGCGGCAAACGCTCAGTGCCGAGCTGGGGCTGAACGAGGCGCAAATCAAGATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGAGCTCGTCGGAGAAGAACCCGCTCGCCCTCCAGCTGATGGCCCAAGGTCTGTACAATCACTCGACCGTGCCGCTCACGAAGGAGGAGGAAGAGCTCGAGATGCGCATGAACGGACAGATCCCGTAAAAAAAAAAATAAAACGGAAACGCATTCGGACGGATCGCAGATACACACACACACACATGCTTGACAACCATCCTATCCCCAACTTTCACCCACCTTCTAACAGGGTACAAATAGCGGACGTCCCTACAGAAGAACGATGGCTTAGTTGGTTCGTGGTGCAATAGTAAGAGACGAGAGAGAGACGAGAGAGCGCGTAAGAAAAGGATCAACAAGCAACAAGGTGTGGTATGGTGGTGAGACGTCCGGAAGCGACGAGGACAGCAAGAATCAAAGCAATACTATAAAGTGGCTAGTACAACGCGACAAGGATACCTACTTTAAATTGATAAGGGTTACAGATGTTTGTAAATTATTATTCCTCCATTTTCCGACAGCTCTCTCGCGCTCTTCTCTGCTTGAATATT]
[+] EMBL AGU42429 [GAAGATCGCTGCAGTCCCCAGAGTGCTCCTAGTCCACCGCATCATCACCACAGTAGCCAGAGCCCGACGAGCACGACCACGGTTACGATGGCAACGGCAAGTCCTGTGCCCGCCTGCACCACCACCACCAGCACCACCAGCACCTCTGGCGCTAGCGCGGCTAGTTCGCCTACCCGCGACGAGATGTCCGTAGTGGTACCGATCTCTCCGCTGCACATCAAGCAGGAACCGCTCGGCAGCGATGGACCGATGCCAGCGCAGCCACCTCACCACCACCAGCATCCCCACCACCACCAGCTACCCCATCATCCCCATCATCAGCATCATCCGCAGCAGCAGCCCTCCCCGCAGACCTCCCCGCCCGCCAGCATATCCTTTTCCATCACCAACATCCTGAGCGATCGGTTTGGCAAGGCAACGGCCGAACAGCAGCAGCAGCCCCATCCGCAATCTCCTGCCATCCGCGAACCGATCAGCCCCGGACCGATCCATCCCGCGGTGCTCCTGCCCTACCCACAGCACGTGCTCCACCCAGCGCATCATCCGGCCCTGCTCCATCCAGCGTACCACACCGGCCTTCACCATTACTACCAGCCGTCGCCATCGCATCCACAGCCGATTGTGCCCCAGCCTCAGCGAGCGTCTCTGGAGCGAAGGGACAGTCTGTTCCGGCCGTACGACATCAGCAAAAGTCCGCGCCTTTGCAGCAGCAATGGAAGCAGCTCGGCCACCCCTCTGCCCCTCCATCCGTACCACACGGACAGCGATTGCTCGACGCAGGATTCAACGTCCGCCCCGAGTCCCGCCACGTACGGTGATATCGCTTCGCCCTCGTCCGCCTCCTCCGCCATGACCACGCCGGCCACTACCAGCAGTCCCACGGGCAGTGTGTACGACTATAGCCGCAAAGCGAGCGCCCTGGACCATCGAGCCGCGCTGCTGAATGGATTCAGTGCAGCCGCCAGCTACCCCAAACTCCACGAAGAGATCATCAACAGGCCACCGCAAGTTCCAGGCGAACGTGATCGAATCGCAAACGAAGGCGGCACTGGCTGCGGCAGCCACGGCTGCTGCGGCGGCGCTTCCGCGACACCCCACAACATGCCACCGCTGGGCAGTTTGTGCAAGACGGTGTCACAGATCGGACAGCATGTGGCCGGTACGGGCAGCTTGAACGGATCGGGCAGTGCAACGAATGGGGCGTCGAATGGTGGTTCCGGTGCTCCGGCCACTGCCAAACCAACGCCAAAGCCCATCCCAAAACCAGCGCCGAGCTCGGAAACCAATGGTTCCTCGTCGCAGGAGCGTGGCATGGAGTCGTCGGACGATGCGAAGTCGGAAACGAGCAGCACCAAGGATGGAAGCGAAAATGGCAGCAATCTGTGGCCGGCCTGGGTGTACTGCACGCGGTACAGCGATCGTCCAAGCTCTGGTCCTCGCTACAGACGCACGAAGCAACCGAAGAAAAGGGCGGACAGTGAGGAGAAGCGCCCACGAACAGCCTTTTCCAATGCGCAACTGCAAAGACTGAAGAATGAGTTCAACGAAAATCGCTATCTGACGGAAAAGCGGCGGCAAACGCTCAGTGCCGAGCTGGGGCTGAACGAGGCGCAAATCAAGATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGAGCTCGTCGGAGAAGAACCCGCTCGCCCTCCAGCTGATGGCCCAAGGTCTGTACAATCACTCGACCGTGCCGCTCACGAAGGAGGAGGAAGAGCTCGAGATGCGCATGAACGGACAGATCCCGTAAAAAAAAAAATAAAACGGAAACGCATTCGGACGGATCGCAGATACACACACACACACATGCTTGACAACCATCCTATCCCCAACTTTCACCCACCTTCTAACAGGGTACAAATAGCGGACGTCCCTACAGAAGAACGATGGCTTAGTTGGTTCGTGGTGCAATAGTAAGAGACGAGAGAGAGACGAGAGAGCGCGTAAGAAAAGGATCAACAAGCAACAAGGTGTGGTATGGTGGTGAGACGTCCGGAAGCGACGAGGACAGCAAGAATCAAAGCAATACTATAAAGTGGCTAGTACAACGCGACAAGGATACCTACTTTAAATTGATAAGGGTTACAGATGTTTGTAAATTATTATTCCTCCATTTTCCGACAGCTCTCTCGCGCTCTTCTCTGCTTGAATATT]
consensusID : consensus_2692#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 640 fasta sequence
[GAGCCCGATATCGCCCCTCTCGTCGACGGGTTCGCTGAAGGGTGTGGACCATCAGTCGAGTGGCCAAGGTGGTTCGAGTGCAACGGGAGCGAATGGTGGTGCTAGTGGTGGTGGTGCTGGAAGTACCGGGTCCAGTTCCGGGTCTGGCAGCTCGGGATCCGGTTCCGGAGGGCCGATGGTGTGGCCGGCCTGGGTGTACTGCACGCGGTACAGCGATCGACCTAGTTCAGGAAGAAGTCCACGGACGCGCAAACCAAAGAAAAGCCCGGCGGAAAAGAGTAGCAGCGGCCCGGCACAACAGAGTGCCTCGGCGGCGGCCCTCGCCGATGACAAGCGACCCCGGACGGCGTTCAGCGGGCCCCAGCTGGCACGATTAAAGCACGAGTTTGCCGAGAATCGGTACCTTACCGAGCGCCGTCGCCAGCAGTTGAGTGCGGAGCTGGGGCTGAACGAGGCACAGATCAAGATCTGGTTCCAGAACAAGCGCGCCAAAATCAAGAAATCGTCCGGCCAGAAGAACCCGCTCGCCCTCCAGCTGATGGCCCAGGGTCTGTACAATCACTCGACCGTCCCGTTGACCCGCGAGGAGGAGGAACTGCAGGAGATGCAGGCGGCAGCAGCGGCGGCAGCCGAATCGCGC]
[+] EMBL BX621502 [GAGCCCGATATCGCCCCTCTCGTCGACGGGTTCGCTGAAGGGTGTGGACCATCAGTCGAGTGGCCAAGGTGGTTCGAGTGCAACGGGAGCGAATGGTGGTGCTAGTGGTGGTGGTGCTGGAAGTACCGGGTCCAGTTCCGGGTCTGGCAGCTCGGGATCCGGTTCCGGAGGGCCGATGGTGTGGCCGGCCTGGGTGTACTGCACGCGGTACAGCGATCGACCTAGTTCAGGAAGAAGTCCACGGACGCGCAAACCAAAGAAAAGCCCGGCGGAAAAGAGTAGCAGCGGCCCGGCACAACAGAGTGCCTCGGCGGCGGCCCTCGCCGATGACAAGCGACCCCGGACGGCGTTCAGCGGGCCCCAGCTGGCACGATTAAAGCACGAGTTTGCCGAGAATCGGTACCTTACCGAGCGCCGTCGCCAGCAGTTGAGTGCGGAGCTGGGGCTGAACGAGGCACAGATCAAGATCTGGTTCCAGAACAAGCGCGCCAAAATCAAGAAATCGTCCGGCCAGAAGAACCCGCTCGCCCTCCAGCTGATGGCCCAGGGTCTGTACAATCACTCGACCGTCCCGTTGACCCGCGAGGAGGAGGAACTGCAGGAGATGCAGGCGGCAGCAGCGGCGGCAGCCGAATCGCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2692#0 GAAGATCGCTGCAGTCCCCAGAGTGCTCCTAGTCCACCGCATCATCACCACAGTAGCCAG 60
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 AGCCCGACGAGCACGACCACGGTTACGATGGCAACGGCAAGTCCTGTGCCCGCCTGCACC 120
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 ACCACCACCAGCACCACCAGCACCTCTGGCGCTAGCGCGGCTAGTTCGCCTACCCGCGAC 180
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GAGATGTCCGTAGTGGTACCGATCTCTCCGCTGCACATCAAGCAGGAACCGCTCGGCAGC 240
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GATGGACCGATGCCAGCGCAGCCACCTCACCACCACCAGCATCCCCACCACCACCAGCTA 300
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CCCCATCATCCCCATCATCAGCATCATCCGCAGCAGCAGCCCTCCCCGCAGACCTCCCCG 360
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CCCGCCAGCATATCCTTTTCCATCACCAACATCCTGAGCGATCGGTTTGGCAAGGCAACG 420
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GCCGAACAGCAGCAGCAGCCCCATCCGCAATCTCCTGCCATCCGCGAACCGATCAGCCCC 480
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GGACCGATCCATCCCGCGGTGCTCCTGCCCTACCCACAGCACGTGCTCCACCCAGCGCAT 540
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CATCCGGCCCTGCTCCATCCAGCGTACCACACCGGCCTTCACCATTACTACCAGCCGTCG 600
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CCATCGCATCCACAGCCGATTGTGCCCCAGCCTCAGCGAGCGTCTCTGGAGCGAAGGGAC 660
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 AGTCTGTTCCGGCCGTACGACATCAGCAAAAGTCCGCGCCTTTGCAGCAGCAATGGAAGC 720
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 AGCTCGGCCACCCCTCTGCCCCTCCATCCGTACCACACGGACAGCGATTGCTCGACGCAG 780
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GATTCAACGTCCGCCCCGAGTCCCGCCACGTACGGTGATATCGCTTCGCCCTCGTCCGCC 840
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 TCCTCCGCCATGACCACGCCGGCCACTACCAGCAGTCCCACGGGCAGTGTGTACGACTAT 900
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 AGCCGCAAAGCGAGCGCCCTGGACCATCGAGCCGCGCTGCTGAATGGATTCAGTGCAGCC 960
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GCCAGCTACCCCAAACTCCACGAAGAGATCATCAACAGGCCACCGCAAGTTCCAGGCGAA 1020
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CGTGATCGAATCGCAAACGAAGGCGGCACTGGCTGCGGCAGCCACGGCTGCTGCGGCGGC 1080
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GCTTCCGCGACACCCCACAACATGCCACCGCTGGGCAGTTTGTGCAAGACGGTGTCACAG 1140
consensus_2692#1 ---------GAGCCCGATATCGCCCCTCTCGTCGACGGGTT-CGCTGAAGGGTGT----- 45
*** * * * ** * * * * * ** ** * *****
consensus_2692#0 ATCGGACAGCATGTGGCCGGTACGGGCAGCTTGAACGGATCGGGCAGTGCAACGAATGGG 1200
consensus_2692#1 ---GGAC--CAT-----CAGT-CGAGTGGCCAAGGTGGTTCG---AGTGCAACGGGAG-- 89
**** *** * ** ** * ** ** *** ********* *
consensus_2692#0 GCGTCGAATGGTGGTTCCGGTGCTCCGGCCACTGCCAAACCAACGCCAAAGCCCATCCCA 1260
consensus_2692#1 ----CGAATGGTGGTGCTAGTGGT---GGTGGTGCTGGA--AGTACCGGGTCCAGTTCCG 140
*********** * *** * * *** * * ** ** * **
consensus_2692#0 AAACCAGCGCCGAGCTCGGAAACCAATGGTTCCTCGTCGCAGGAGCGTGGCATGGAGTCG 1320
consensus_2692#1 GGTCTGGC----AGCTCGGGATCC---GGTTC-----CGGAGGGCCG----ATGGTGTGG 184
* ** ******* * ** ***** ** *** ** **** ** *
consensus_2692#0 TCGGACGATGCGAAGTCGGAAACGAGCAGCACCAAGGATGGAAGCGAAAATGGCAGCAAT 1380
consensus_2692#1 CCGGCCTGGGTGTACT-----GCACGCGGTAC-AGCGATCGACCTAGTTCAGGAAGAAGT 238
*** * * * * * * ** * ** * *** ** ** ** * *
consensus_2692#0 CTGTGGCCGGCCTGGGTGTACTGCACGCGGTACAGCGATCGTCCAAGCTCTGGTCCTCGC 1440
consensus_2692#1 CCACGGACGCGCAAACCAAAGAAAAGCCCGGCGGAAAAGAGT---AGCAGCGGCCC--GG 293
* ** ** * * * * * * ** *** ** ** *
consensus_2692#0 TACAGACGCACGAAGCAACCGAAGAAAAGGGCGGACAGTGAGGAGAAGCGCCCACGAACA 1500
consensus_2692#1 CACA-----ACAGAGTGCCTC--GGCGGCGGCCCTCGCCGATGACAAGCGACCCCGGACG 346
*** ** ** * * *** * ** ** ***** ** ** **
consensus_2692#0 GCCTTTTCCAATGCGCAACTGCAAAGACTGAAGAATGAGTTCAACGAAAATCGCTATCTG 1560
consensus_2692#1 GCGTTCAGCGGGCCCCAGCTGGCACGATTAAAGCACGAGTTTGCCGAGAATCGGTACCTT 406
** ** * * ** *** * ** * *** * ***** *** ***** ** **
consensus_2692#0 ACGGAAAAGCGGCGGCAAACGCTCAGTGCCGAGCTGGGGCTGAACGAGGCGCAAATCAAG 1620
consensus_2692#1 ACCGAGCGCCGTCGCCAGCAGTTGAGTGCGGAGCTGGGGCTGAACGAGGCACAGATCAAG 466
** ** ** ** ** * * ***** ******************** ** ******
consensus_2692#0 ATCTGGTTCCAGAACAAGCGGGCCAAGATCAAGAAGAGCTCGTCGGAGAAGAACCCGCTC 1680
consensus_2692#1 ATCTGGTTCCAGAACAAGCGCGCCAAAATCAAGAAATCGTCCGGCCAGAAGAACCCGCTC 526
******************** ***** ******** ** **************
consensus_2692#0 GCCCTCCAGCTGATGGCCCAAGGTCTGTACAATCACTCGACCGTGCCGCTCACGAAGGAG 1740
consensus_2692#1 GCCCTCCAGCTGATGGCCCAGGGTCTGTACAATCACTCGACCGTCCCGTTGACCCGCGAG 586
******************** *********************** *** * ** ***
consensus_2692#0 GAGGAAGAGCT-CGAGATGCGCATGAACGGACAGATCCCGTAAAAAAAAAAATAAAACGG 1799
consensus_2692#1 GAGGAGGAACTGCAGGAGATGCAGGCGGCAGCAG----CGGCGGCAGCCGAATCGCGC-- 640
***** ** ** * ** *** * *** ** * *** *
consensus_2692#0 AAACGCATTCGGACGGATCGCAGATACACACACACACACATGCTTGACAACCATCCTATC 1859
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 CCCAACTTTCACCCACCTTCTAACAGGGTACAAATAGCGGACGTCCCTACAGAAGAACGA 1919
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 TGGCTTAGTTGGTTCGTGGTGCAATAGTAAGAGACGAGAGAGAGACGAGAGAGCGCGTAA 1979
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 GAAAAGGATCAACAAGCAACAAGGTGTGGTATGGTGGTGAGACGTCCGGAAGCGACGAGG 2039
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 ACAGCAAGAATCAAAGCAATACTATAAAGTGGCTAGTACAACGCGACAAGGATACCTACT 2099
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 TTAAATTGATAAGGGTTACAGATGTTTGTAAATTATTATTCCTCCATTTTCCGACAGCTC 2159
consensus_2692#1 ------------------------------------------------------------
consensus_2692#0 TCTCGCGCTCTTCTCTGCTTGAATATT 2186
consensus_2692#1 ---------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||