cluster # 2926

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Anopheles gambiae
cluster # 2926 cluster # 2926 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2926#0 length = 698 sequences # 1

consensus_2926#1 length = 687 sequences # 1

consensusID : consensus_2926#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [CCGCGGACGCGTGGGTGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGCAGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCAAAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCGAAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTGAAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGTACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAATTGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGCGGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCGACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGCTCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGGCTTCCTGGACGTGGTCGAGGTGCTGACCGAGCTGATGCTGAAATCGCTGATGCCCACCCATCGCAAGCTGATCACGCTGCCGATGCGCGGCACGGACTGGAAG]

[+] EMBL BM584151             [CCGCGGACGCGTGGGTGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGCAGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCAAAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCGAAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTGAAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGTACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAATTGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGCGGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCGACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGCTCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGGCTTCCTGGACGTGGTCGAGGTGCTGACCGAGCTGATGCTGAAATCGCTGATGCCCACCCATCGCAAGCTGATCACGCTGCCGATGCGCGGCACGGACTGGAAG]




>consensus_2926#0
CCGCGGACGCGTGGGTGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGC
GCTACTTTGAGCAGCAGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGC
AAGGCCGTCCGGCCAAAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTG
ATTACACGGCTGGCGAAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGG
CACATGCGGACGGTGAAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGC
TGACCAAGCTGTGGTACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACA
TGAAGGACGCGGAATTGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGT
GCCGGGCCCGCAAGCGGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAA
AGGGTACGCTGCGCGACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCT
GCCATCTGCACGCGCTCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGGCTTCC
TGGACGTGGTCGAGGTGCTGACCGAGCTGATGCTGAAATCGCTGATGCCCACCCATCGCA
AGCTGATCACGCTGCCGATGCGCGGCACGGACTGGAAG

consensusID : consensus_2926#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 687
fasta sequence

                              [CCGGCGCACATGTTCGTTCAAAGTAAACAGTTCACAGTTTTTGTATTGTCCACAGCACGATGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGCAGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCAAAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCGAAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTGAAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGTACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAATTGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGCGGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCGACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGCTCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGCTTTCCTGGACGTGGTCGAGGTGCTGACCGAGCTGATGCTGAAATCGC]

[+] EMBL BM598222             [CCGGCGCACATGTTCGTTCAAAGTAAACAGTTCACAGTTTTTGTATTGTCCACAGCACGATGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGCAGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCAAAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCGAAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTGAAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGTACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAATTGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGCGGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCGACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGCTCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGCTTTCCTGGACGTGGTCGAGGTGCTGACCGAGCTGATGCTGAAATCGC]




>consensus_2926#1
CCGGCGCACATGTTCGTTCAAAGTAAACAGTTCACAGTTTTTGTATTGTCCACAGCACGA
TGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGC
AGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCA
AAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCG
AAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTG
AAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGT
ACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAAT
TGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGC
GGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCG
ACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGC
TCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGCTTTCCTGGACGTGGTCGAGG
TGCTGACCGAGCTGATGCTGAAATCGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2926#0      ---------------------------------------------CCGCGGACGCGTGGG 15
consensus_2926#1      CCGGCGCACATGTTCGTTCAAAGTAAACAGTTCACAGTTTTTGTATTGTCCACAGCACGA 60
                                                                     *   **     * 

consensus_2926#0      TGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGC 75
consensus_2926#1      TGGCGATCGGCGGAGGAAAGTTTAAAAAGAAAAGCGACAAAAAGCGCTACTTTGAGCAGC 120
                      ************************************************************

consensus_2926#0      AGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCA 135
consensus_2926#1      AGGCGGACGAATCAGCAACGCCAGAACCACAGCCGAGTGAAGTGCAAGGCCGTCCGGCCA 180
                      ************************************************************

consensus_2926#0      AAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCG 195
consensus_2926#1      AAATCGTATTCGACGACGAAGGTGAGCAACGCGTGGTGCCGATTGATTACACGGCTGGCG 240
                      ************************************************************

consensus_2926#0      AAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTG 255
consensus_2926#1      AAACCGGCACATCGTCGCGTGCTACCGGTGCGAGGCGCAAGAAGGCACATGCGGACGGTG 300
                      ************************************************************

consensus_2926#0      AAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGT 315
consensus_2926#1      AAGATGATGACCACGAGGGTGACGAGGATGAGGAGGAGGACCAGCTGACCAAGCTGTGGT 360
                      ************************************************************

consensus_2926#0      ACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAAT 375
consensus_2926#1      ACAACAACTTCGAACCATACAATCTGGTCGGCGAGATGGTGGACATGAAGGACGCGGAAT 420
                      ************************************************************

consensus_2926#0      TGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGC 435
consensus_2926#1      TGGCGGAACTGCGCAACATCTGCAAGGTGGCATTCGAGGCCGAGTGCCGGGCCCGCAAGC 480
                      ************************************************************

consensus_2926#0      GGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCG 495
consensus_2926#1      GGTACGATCCGTCCGATGCAAAGTGGCTGCTGAGCGCGCTGGAAAAGGGTACGCTGCGCG 540
                      ************************************************************

consensus_2926#0      ACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGC 555
consensus_2926#1      ACAGGGCCAACGCGGGGGCGCTGCTGGTGCAGACGAACCCGTTCTGCCATCTGCACGCGC 600
                      ************************************************************

consensus_2926#0      TCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGGCTTCCTGGACGTGGTCGAGG 615
consensus_2926#1      TCGACACGCTGGTGGGCATGGTGAAACCGTCCAACAAGGCTTTCCTGGACGTGGTCGAGG 660
                      ***************************************  *******************

consensus_2926#0      TGCTGACCGAGCTGATGCTGAAATCGCTGATGCCCACCCATCGCAAGCTGATCACGCTGC 675
consensus_2926#1      TGCTGACCGAGCTGATGCTGAAATCGC--------------------------------- 687
                      ***************************                                 

consensus_2926#0      CGATGCGCGGCACGGACTGGAAG 698
consensus_2926#1      -----------------------