cluster # 2938

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 2938 cluster # 2938 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2938#0 length = 651 sequences # 1

consensus_2938#1 length = 639 sequences # 1

consensusID : consensus_2938#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence

                              [ATCGCCGAGGTTAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGCCAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTGCCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCTTTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTTCCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGAACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGTAGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCGGGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACCGACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCGGCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGATCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATCCGCGGCTATAAGG]

[+] EMBL AL932236             [ATCGCCGAGGTTAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGCCAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTGCCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCTTTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTTCCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGAACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGTAGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCGGGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACCGACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCGGCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGATCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATCCGCGGCTATAAGG]




>consensus_2938#0
ATCGCCGAGGTTAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGCC
AGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTGC
CTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCTT
TAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTTC
CCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGAA
CGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGTA
GATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCGG
GCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACCG
ACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCGG
CCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGAT
CATGGCGGTGAAACGGGCAGCGATATCTACGTCACATCCGCGGCTATAAGG

consensusID : consensus_2938#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence

                              [GTGTGTGCATGAAAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGCCAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTGCCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCTTTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTTCCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGAACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGTAGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCGGGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACCGACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCGGCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGATCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATC]

[+] EMBL BX623877             [GTGTGTGCATGAAAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGCCAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTGCCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCTTTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTTCCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGAACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGTAGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCGGGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACCGACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCGGCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGATCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATC]




>consensus_2938#1
GTGTGTGCATGAAAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGC
CAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTG
CCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCT
TTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTT
CCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGA
ACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGT
AGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCG
GGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACC
GACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCG
GCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGA
TCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2938#0      -ATCGCCGAGGTTAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGC 59
consensus_2938#1      GTGTGTGCATGAAAAAAAAACGGACGACCCAGCATTGCCAAGTCATCTCTCCGAATGTGC 60
                          *   * *  ***********************************************

consensus_2938#0      CAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTG 119
consensus_2938#1      CAGCGTGCGTACCGTGTTTTCTGATCCGCGTGCCCGTTTTGTTGCGGCAACAGTTTAGTG 120
                      ************************************************************

consensus_2938#0      CCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCT 179
consensus_2938#1      CCTAAAAACGATCGACTCGTGTGCGTGCTTGTGTGTACAAATTAAGAAGTGGCATTAGCT 180
                      ************************************************************

consensus_2938#0      TTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTT 239
consensus_2938#1      TTAAGACGTTGTAATCTAGCTTCAGTTCAACCGTTGTGGCTTGGATCATCTCCAATCTTT 240
                      ************************************************************

consensus_2938#0      CCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGA 299
consensus_2938#1      CCCCCCTGTACACCCCATCATTTCAACATCCACAGTCAACATGTTGAAGAACATTCACGA 300
                      ************************************************************

consensus_2938#0      ACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGT 359
consensus_2938#1      ACGTACCGTGAAGAAGGTAAAGGGTAACCACTATGTGGCAACGCACGGTCGCGATACGGT 360
                      ************************************************************

consensus_2938#0      AGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCG 419
consensus_2938#1      AGATCTGCCGTACGCACAGGCCAACCGGGGCTACTCGACCGATGGCGAGGATAGCCAGCG 420
                      ************************************************************

consensus_2938#0      GGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACC 479
consensus_2938#1      GGCCCCCTCGGAGCGCACGCTGTCCGAGTATACGGTGGCGAACGAACGAGCCACACCACC 480
                      ************************************************************

consensus_2938#0      GACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCG 539
consensus_2938#1      GACTGCACCGGCCCGCAAATCACGCCCCGAGCACAAGTACCAGAACAACGGTGGCCCGCG 540
                      ************************************************************

consensus_2938#0      GCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGA 599
consensus_2938#1      GCCGCTCTCTAGTCCACCGACGCGCGCCCCACCGAGGGCACCGTCCGCGCTCAGCTACGA 600
                      ************************************************************

consensus_2938#0      TCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATCCGCGGCTATAAGG 651
consensus_2938#1      TCATGGCGGTGAAACGGGCAGCGATATCTACGTCACATC------------- 639
                      ***************************************