cluster # 2985

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Anopheles gambiae
cluster # 2985 cluster # 2985 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2985#0 length = 717 sequences # 1

consensus_2985#1 length = 57 sequences # 1

consensusID : consensus_2985#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 717
fasta sequence

                              [AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGCAGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCAGGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGGGCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTTCGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCCACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACGACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTGCCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTACCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAAGCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGATTTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGATCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG]

[+] EMBL BX468226             [AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGCAGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCAGGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGGGCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTTCGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCCACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACGACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTGCCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTACCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAAGCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGATTTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGATCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG]




>consensus_2985#0
AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGC
AGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCA
GGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGG
GCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTT
CGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCC
ACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACG
ACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTG
CCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTA
CCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAA
GCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGAT
TTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGA
TCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG

consensusID : consensus_2985#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 57
fasta sequence

                              [AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT]

[+] EMBL AL932546             [AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT]




>consensus_2985#1
AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2985#0      AGATTCCGCACGATGGAGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCTGGC 60
consensus_2985#1      AAATTCCCCCCGAGGNNGAATGTTGAGGAACGTACTTACACTACTGCTGCCAGTGCT--- 57
                      * ***** * *** *  ****************************************   

consensus_2985#0      AGTGACCGGCGTAAGCGTTGATCCACGATGTACGCGATACAGTCTCGGTTCGGAGGCGCA 120
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      GGTCCTGCCGCATCTGCAGGACTGTCGCAAGTTTGTCATCTGTGATATGGGCGGCAATGG 180
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      GCAGGTGCTTTCGTGTCCTCCGGGGCTGTTCTTTAGTGATGAAGCGCACGCCTGCTCGTT 240
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      CGATATGGCGGCCTGTACGCACGGTGAGCTTGACGAGACGGTGCCCTTCGTTCCCGAGCC 300
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      ACAACCACCACGACCCGTGCCACAGGAGCCCTCGCTACCGGTTGCCCCGGTAGAGCCACG 360
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      ACCTCTTCCGTTGCCGGTACCACAGCCCAGCCACTGCCCGTCATCCCCAGTGATCCGCTG 420
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      CCGGTTGTGCCACCGATAGTGGAAGGCAATTCGAACGGGGCTGAAACAAAACCATCGCTA 480
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      CCAAACTGGCTACCGATCGTGACGTCACCTCCAGTCATTGAAGAATCCGTGGAAGAACAA 540
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      GCTGAAATCGAGCAGCTTCCACCGCAGAAGTGTTTGCTGGGATAAGCCGATGGGTAAGAT 600
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      TTACCCCATCGCCAACGACTGCGGCCTGTACGTGGTGTGTATGGGCAACAATGATGNCGA 660
consensus_2985#1      ------------------------------------------------------------
                                                                                  

consensus_2985#0      TCGGTGGCAAACGCTGCCCCCAANGGGTTTACTGTACGGAATTCAACAACCAGGCAG 717
consensus_2985#1      ---------------------------------------------------------