cluster # 3155

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Anopheles gambiae
cluster # 3155 cluster # 3155 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3155#0 length = 501 sequences # 1

consensus_3155#1 length = 177 sequences # 1

consensusID : consensus_3155#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 501
fasta sequence

                              [GAATAGAGTGTGCGATCGATTGAATAGCATCCCGTCGAGTACCTGGTAGTAAGCCAAGCAGCTGCCGGAATTGCATCAACCTCATTCCACTTCAGCCAGTGCAACGCACAAACCCGGCGTGCTGTGGGTTTGTGAGCTTAATCACCTTACCCTGCTTGGCCCCGCTGTCCTGTGCGGATAGATGTTCAACTATGCTACTTAACCGCATGGAGGGAAGGGGAGAAAAGTTCGGAGCAACAAGGTAGCATAAGTATTTATTAAACAAGGCGGATGCGGCACGAACTTAACTCCCATCCCGTCCCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGATTCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTTGTTAAACGTTAGTGTGTTAGAGGTAATTGCAGGTGGGATAGAGCGTGGCACAGTGACATCCGAAGGGGCTCCTGGCGGATG]

[+] EMBL BX612202             [GAATAGAGTGTGCGATCGATTGAATAGCATCCCGTCGAGTACCTGGTAGTAAGCCAAGCAGCTGCCGGAATTGCATCAACCTCATTCCACTTCAGCCAGTGCAACGCACAAACCCGGCGTGCTGTGGGTTTGTGAGCTTAATCACCTTACCCTGCTTGGCCCCGCTGTCCTGTGCGGATAGATGTTCAACTATGCTACTTAACCGCATGGAGGGAAGGGGAGAAAAGTTCGGAGCAACAAGGTAGCATAAGTATTTATTAAACAAGGCGGATGCGGCACGAACTTAACTCCCATCCCGTCCCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGATTCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTTGTTAAACGTTAGTGTGTTAGAGGTAATTGCAGGTGGGATAGAGCGTGGCACAGTGACATCCGAAGGGGCTCCTGGCGGATG]




>consensus_3155#0
GAATAGAGTGTGCGATCGATTGAATAGCATCCCGTCGAGTACCTGGTAGTAAGCCAAGCA
GCTGCCGGAATTGCATCAACCTCATTCCACTTCAGCCAGTGCAACGCACAAACCCGGCGT
GCTGTGGGTTTGTGAGCTTAATCACCTTACCCTGCTTGGCCCCGCTGTCCTGTGCGGATA
GATGTTCAACTATGCTACTTAACCGCATGGAGGGAAGGGGAGAAAAGTTCGGAGCAACAA
GGTAGCATAAGTATTTATTAAACAAGGCGGATGCGGCACGAACTTAACTCCCATCCCGTC
CCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGAT
TCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTT
GTTAAACGTTAGTGTGTTAGAGGTAATTGCAGGTGGGATAGAGCGTGGCACAGTGACATC
CGAAGGGGCTCCTGGCGGATG

consensusID : consensus_3155#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 177
fasta sequence

                              [NGCCAGAATTCGGCACGAGGCGTCCCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGATTCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTTGTTAAAACGTTAGTGTGTTAGANGTAATTGCAG]

[+] EMBL BX625980             [NGCCAGAATTCGGCACGAGGCGTCCCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGATTCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTTGTTAAAACGTTAGTGTGTTAGANGTAATTGCAG]




>consensus_3155#1
NGCCAGAATTCGGCACGAGGCGTCCCGTCACAAAGCGCTCACAATAGATTGCCATTCACG
TGAGAGTGTGTGCCGGGGGATGATTCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGT
GTGTCGGAGTATTAGAAGACTTTTGTTAAAACGTTAGTGTGTTAGANGTAATTGCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3155#0      GAATAGAGTGTGCGATCGATTGAATAGCATCCCGTCGAGTACCTGGTAGTAAGCCAAGCA 60
consensus_3155#1      ------------------------------------------------------------
                                                                                  

consensus_3155#0      GCTGCCGGAATTGCATCAACCTCATTCCACTTCAGCCAGTGCAACGCACAAACCCGGCGT 120
consensus_3155#1      ------------------------------------------------------------
                                                                                  

consensus_3155#0      GCTGTGGGTTTGTGAGCTTAATCACCTTACCCTGCTTGGCCCCGCTGTCCTGTGCGGATA 180
consensus_3155#1      ------------------------------------------------------------
                                                                                  

consensus_3155#0      GATGTTCAACTATGCTACTTAACCGCATGGAGGGAAGGGGAGAAAAGTTCGGAGCAACAA 240
consensus_3155#1      ------------------------------------------------------------
                                                                                  

consensus_3155#0      GGTAGCATAAGTATTTATTAAACAAGGCGGATGCGGCACGAACTTAACTCCCATCCCGTC 300
consensus_3155#1      ----------------------------------NGCCAGAATTCGGCAC--GAGGCGTC 24
                                                         **  *** *   * *      ****

consensus_3155#0      CCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGAT 360
consensus_3155#1      CCGTCACAAAGCGCTCACAATAGATTGCCATTCACGTGAGAGTGTGTGCCGGGGGATGAT 84
                      ************************************************************

consensus_3155#0      TCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTT 420
consensus_3155#1      TCGGAGATTGGGTCTGAGCGTGAGTGTTTGTGGTGTGTGTCGGAGTATTAGAAGACTTTT 144
                      ************************************************************

consensus_3155#0      GTTAAA-CGTTAGTGTGTTAGAGGTAATTGCAGGTGGGATAGAGCGTGGCACAGTGACAT 479
consensus_3155#1      GTTAAAACGTTAGTGTGTTAGANGTAATTGCAG--------------------------- 177
                      ****** *************** **********                           

consensus_3155#0      CCGAAGGGGCTCCTGGCGGATG 501
consensus_3155#1      ----------------------