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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3371#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 861 fasta sequence
[TTTTCTTTCCCCCCTTTGTTTCTCTCTTTCTTCGCAACCCCTTGCCACACACAGGTGTTAAGGCGTCCTTTGTCGCGAAGTACAACATCACGCCGGAGGACTACCACATGATCGAGATCGTGATCACGGAGAACAAACCGCACAAAGCGGGACCCCAGTGGAAGTTTGCCGGCGCGTTCTACTTTGCCACGGTCGTGCTGGCGATGATCGGGTACGGCCACTCGACGCCGGTCACCATCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGCTCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTGGTACGCCGCGCGAAAAAATATCTGCGCTGCCAGCAGACGGAAGCTACCGAGATGAACCTGATGCTCGCAACCGGATTACTTTCGTCGGTTATTATTGCGACCGGAGCGGCTGTGTTTTCACGCTACGAAGGATGGAGCTATTTCGACAGCTTCTACTACTGCTTTGTAACACTGACGACGATCGGCTTCGGTGACTACGTCGCGCTGCAGAACGACCAGGCGCTGATCAACAAGCCCGGCTACGTCGCGCTCAGCCTGGTGTTCATCCTGTTCGGGCTGGCCGTCGTCGCGGCCAGCATCAATCTGCTCGTCCTGCGCTTCATGACGATGAATGCGGAAGACATCCGGCGGGAGGAGGCCGAAATGCAATCGTCCGTCGATGGGCTGACGACGTACGAGTGCGAATCGACGGGAAAGTTGCTCTCGTGCGCCAACCTGAACTACTGCTCGGAGATCGAGGAAGAGGACACCTCCGTCTGTTCGTGTACCTGCCTCGGTGGTAACAGTTTCACCACGC]
[+] EMBL BX618242 [TTTTCTTTCCCCCCTTTGTTTCTCTCTTTCTTCGCAACCCCTTGCCACACACAGGTGTTAAGGCGTCCTTTGTCGCGAAGTACAACATCACGCCGGAGGACTACCACATGATCGAGATCGTGATCACGGAGAACAAACCGCACAAAGCGGGACCCCAGTGGAAGTTTGCCGGCGCGTTCTACTTTGCCACGGTCGTGCTGGCGATGATCGGGTACGGCCACTCGACGCCGGTCACCATCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGCTCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTGGTACGCCGCGCGAAAAAATATCTGCGCTGCCAGCAGACGGAAGCTACCGAGATGAACCTGATGCTCGCAACCGGATTACTTTCGTCGGTTATTATTGCGACCGGAGCGGCTGTGTTTTCACGCTACGAAGGATGGAGCTATTTCGACAGCTTCTACTACTGCTTTGTAACACTGACGACGATCGGCTTCGGTGACTACGTCGCGCTGCAGAACGACCAGGCGCTGATCAACAAGCCCGGCTACGTCGCGCTCAGCCTGGTGTTCATCCTGTTCGGGCTGGCCGTCGTCGCGGCCAGCATCAATCTGCTCGTCCTGCGCTTCATGACGATGAATGCGGAAGACATCCGGCGGGAGGAGGCCGAAATGCAATCGTCCGTCGATGGGCTGACGACGTACGAGTGCGAATCGACGGGAAAGTTGCTCTCGTGCGCCAACCTGAACTACTGCTCGGAGATCGAGGAAGAGGACACCTCCGTCTGTTCGTGTACCTGCCTCGGTGGTAACAGTTTCACCACGC]
consensusID : consensus_3371#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 715 fasta sequence
[CCGGCTACTAGGCGGAGGGAGAGGGAGATAAACAAAGAGAGCGAGAAGTTAGCTAGAACACTGGAAGGGCCAACCCTCTTCAACCCACAACCGCGTAGACGACGACGAAGACAACCATGAAGCGGCAAAACATTCGCACCCTTTCGCTGGTGGTGTGCACGTTCACCTATCTACTGATCGGGGCCGCCGTGTTCGACGCACTGGAATCGGAAACCGAAGCACGCCGTTGGGAGTTTTTGAAAAGTGTTAAGGCGTCCTTTGTCGCGAAGTACAACATCACGCCGGAGGACTACCACATGATCGAGATCGTGATCACGGAGAACAAACCGCACAAAGCGGGACCCCAGTGGAAGTTTGCCGGCGCGTTCTACTTTGCCACGGTCGTGCTGGCGATGATCGGGTACGGCCACTCGACGCCGGTCACCATCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGCTCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTAATACGCCGCGCGAAAAAATATCTGCGCTGCCAGCAGACGGAAGCTACCGAGATGAACCTGATGCTCGCAACCGGATTACTTTCGTCGGTTATTATTACGACCGGAGCGGCTGTGTTTTCACGCTACGAAGGATGGAGCTATTTCGACAGCTTCTACTACTGCTTTGTAACACTGACGACGAT]
[+] EMBL BM621328 [CCGGCTACTAGGCGGAGGGAGAGGGAGATAAACAAAGAGAGCGAGAAGTTAGCTAGAACACTGGAAGGGCCAACCCTCTTCAACCCACAACCGCGTAGACGACGACGAAGACAACCATGAAGCGGCAAAACATTCGCACCCTTTCGCTGGTGGTGTGCACGTTCACCTATCTACTGATCGGGGCCGCCGTGTTCGACGCACTGGAATCGGAAACCGAAGCACGCCGTTGGGAGTTTTTGAAAAGTGTTAAGGCGTCCTTTGTCGCGAAGTACAACATCACGCCGGAGGACTACCACATGATCGAGATCGTGATCACGGAGAACAAACCGCACAAAGCGGGACCCCAGTGGAAGTTTGCCGGCGCGTTCTACTTTGCCACGGTCGTGCTGGCGATGATCGGGTACGGCCACTCGACGCCGGTCACCATCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGCTCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTAATACGCCGCGCGAAAAAATATCTGCGCTGCCAGCAGACGGAAGCTACCGAGATGAACCTGATGCTCGCAACCGGATTACTTTCGTCGGTTATTATTACGACCGGAGCGGCTGTGTTTTCACGCTACGAAGGATGGAGCTATTTCGACAGCTTCTACTACTGCTTTGTAACACTGACGACGAT]
[+] EMBL BX608391 [ GCCACTCGACGCCGGTCACCACCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGCTCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTAATACGCCGCGCGAAAAAATATCTGCGCCGCCAGCAGACGGAAGCTACCGAGATGAACCTGAAGCTCGCAACCGGATTACTTTCGTCGGGTATTATTACGACC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3371#0 ------------------------------------------------------------
consensus_3371#1 CCGGCTACTAGGCGGAGGGAGAGGGAGATAAACAAAGAGAGCGAGAAGTTAGCTAGAACA 60
consensus_3371#0 ------------------------------------------------------------
consensus_3371#1 CTGGAAGGGCCAACCCTCTTCAACCCACAACCGCGTAGACGACGACGAAGACAACCATGA 120
consensus_3371#0 ------------------------------------------------------------
consensus_3371#1 AGCGGCAAAACATTCGCACCCTTTCGCTGGTGGTGTGCACGTTCACCTATCTACTGATCG 180
consensus_3371#0 -----TTTTCTTTCCCCCCTTTGTTTCTCTCTTTCTTCGCAACCCCTTGCCACAC----A 51
consensus_3371#1 GGGCCGCCGTGTTCGACGCACTGGAATCGGAAACCGAAGCACGCCGTTGGGAGTTTTTGA 240
*** * * ** * *** ** *** * *
consensus_3371#0 CAGGTGTTAAGGCGTCCTTTGTCGCGAAGTACAACATCACGCCGGAGGACTACCACATGA 111
consensus_3371#1 AAAGTGTTAAGGCGTCCTTTGTCGCGAAGTACAACATCACGCCGGAGGACTACCACATGA 300
* *********************************************************
consensus_3371#0 TCGAGATCGTGATCACGGAGAACAAACCGCACAAAGCGGGACCCCAGTGGAAGTTTGCCG 171
consensus_3371#1 TCGAGATCGTGATCACGGAGAACAAACCGCACAAAGCGGGACCCCAGTGGAAGTTTGCCG 360
************************************************************
consensus_3371#0 GCGCGTTCTACTTTGCCACGGTCGTGCTGGCGATGATCGGGTACGGCCACTCGACGCCGG 231
consensus_3371#1 GCGCGTTCTACTTTGCCACGGTCGTGCTGGCGATGATCGGGTACGGCCACTCGACGCCGG 420
************************************************************
consensus_3371#0 TCACCATCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGC 291
consensus_3371#1 TCACCATCGGCGGGAAGGCGTTCTGCATGGCGTACGCGATGGTCGGCATTCCGCTGGGGC 480
************************************************************
consensus_3371#0 TCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTGGTACGCC 351
consensus_3371#1 TCGTCATGTTCCAAAGCATTGGCGAACGTTTGAACAAGTTTGCCTCGGTTGTAATACGCC 540
**************************************************** ******
consensus_3371#0 GCGCGAAAAAATATCTGCGCTGCCAGCAGACGGAAGCTACCGAGATGAACCTGATGCTCG 411
consensus_3371#1 GCGCGAAAAAATATCTGCGCTGCCAGCAGACGGAAGCTACCGAGATGAACCTGATGCTCG 600
************************************************************
consensus_3371#0 CAACCGGATTACTTTCGTCGGTTATTATTGCGACCGGAGCGGCTGTGTTTTCACGCTACG 471
consensus_3371#1 CAACCGGATTACTTTCGTCGGTTATTATTACGACCGGAGCGGCTGTGTTTTCACGCTACG 660
***************************** ******************************
consensus_3371#0 AAGGATGGAGCTATTTCGACAGCTTCTACTACTGCTTTGTAACACTGACGACGATCGGCT 531
consensus_3371#1 AAGGATGGAGCTATTTCGACAGCTTCTACTACTGCTTTGTAACACTGACGACGAT----- 715
*******************************************************
consensus_3371#0 TCGGTGACTACGTCGCGCTGCAGAACGACCAGGCGCTGATCAACAAGCCCGGCTACGTCG 591
consensus_3371#1 ------------------------------------------------------------
consensus_3371#0 CGCTCAGCCTGGTGTTCATCCTGTTCGGGCTGGCCGTCGTCGCGGCCAGCATCAATCTGC 651
consensus_3371#1 ------------------------------------------------------------
consensus_3371#0 TCGTCCTGCGCTTCATGACGATGAATGCGGAAGACATCCGGCGGGAGGAGGCCGAAATGC 711
consensus_3371#1 ------------------------------------------------------------
consensus_3371#0 AATCGTCCGTCGATGGGCTGACGACGTACGAGTGCGAATCGACGGGAAAGTTGCTCTCGT 771
consensus_3371#1 ------------------------------------------------------------
consensus_3371#0 GCGCCAACCTGAACTACTGCTCGGAGATCGAGGAAGAGGACACCTCCGTCTGTTCGTGTA 831
consensus_3371#1 ------------------------------------------------------------
consensus_3371#0 CCTGCCTCGGTGGTAACAGTTTCACCACGC 861
consensus_3371#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||