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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3601#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 903 fasta sequence
[CCGCCGCCATCGTTTGTCGCGCGTTCGTGTTCGTCGTCTGTTGTCACCTTTCGCTGTTTTGGGTGCACTGGGTCTATGTGTGTGAGTGTCATTAAAGTGTGTGTGTATGTGTGTGTGTCTGTGCCGTGGTTAGGTAAAATCCCTTCGCAAACCCGCGTGCTGTAGCAGCATCCGTGTGTGCTCCCGATGTGGTCCAGGTGATTCTGGTACACCTTGTCTGTGTGTACGTGCGTGTGTGTGTTTCTTCCTCCTCCTTTTTGCTTGTAAAATTTCATCCCCCCACCCCACACCATCTTTAAAATTTTCCCGCAAGGGAAAAGGCGGCGATAACAAAACCCTATCACAGTGCCCAACAGTGGGAAGTGTTGCAGGAGTGA--GTGTGTGTGTTCATGTGCTTGTCTCGTGTTTTCTTCTCCCCACTTTCCACCATCTCGTGAAGCGTGTTTCTCGACAAGTTTCCCTCACTCAGCTGATTTGATTCCGGTTGAAAAGGCAGCTTAGTAGCAGCAGCAGCAGCAACAGCAGTAGCAACGCTTCCGCACACCTACTTTACACCGATAGCAACAACGCGAAGACTGCCCGCAGGAACAGAGTGCGTGAAATCATAAAAATGGATAAACGAACGGGCATGAAAATTGGATTACTCTGCGTGCTGCTTGGAGTGTGTTCGGCGGTGAAAATCATCAACCTGAAAGTTCCCTCCACCTACCTGCTGGATCAGACGTCCAAAACGCCAGACCCGCTAATACTGGACTGCGAGTACGAGGTGGACGAAAGCGAGAAGGGATTCGTGTTAAAATGGCTCCTGGACGGTCAACCGGGTCTACCAGTGGATACCGTCGAAAAATCCATTCCCCTTCCAATCTTTTAAGAACCGTGTCGACACCAGCTACGTTCGTGTCG]
[+] EMBL BM614828 [CCGCCGCCATCGTTTGTCGCGCGTTCGTGTTCGTCGTCTGTTGTCACCTTTCGCTGTTTTGGGTGCACTGGGTCTATGTGTGTGAGTGTCATTAAAGTGTGTGTGTATGTGTGTGTGTCTGTGCCGTGGTTAGGTAAAATCCCTTCGCAAACCCGCGTGCTGTAGCAGCATCCGTGTGTGCTCCCGATGTGGTCCAGGTGATTCTGGTACACCTTGTCTGTGTGTACGTGCGTGTGTGTGTTTCTTCCTCCTCCTTTTTGCTTGTAAAATTTCATCCCCCCACCCCACACCATCTTTAAAATTTTCCCGCAAGGGAAAAGGCGGCGATAACAAAACCCTATCACAGTGCCCAACAGTGGGAAGTGTTGCAGGAGTGA GTGTGTGTGTTCATGTGCTTGTCTCGTGTTTTCTTCTCCCCACTTTCCACCATCTCGTGAAGCGTGTTTCTCGACAAGTTTCCCTCACTCAGCTGATTTGATTCCGGTTGAAAAGGCAGCTTAGTAGCAGCAGCAGCAGCAACAGCAGTAGCAACGCTTCCGCACACCTACTTTACACCGATAGCAACAACGCGAAGACTGCCCGCAGGAACAGAGTGCGTGAAATCATAAAAATGGATAAACGAACGGGCATGAAAATTGGATTACTCTGCGTGCTGCTTGG ]
[+] EMBL BM626457 [ ccgCCCCACCATCTTTAAAATTTTCCCGCAAGGGAAAAGGCGGCGAAAACAAAACCCTATCACAGTGCCCAACAGTGGGAAGTGTTGCAGGAGTGAGTGTGTGTGTGTTCATGTGCTTGTCTCGTGTTTT TTCTCCCCACTTTCCACCATCTCGTGAAGCGTGTTTCTCGACAAGTTTCCCTCACTCAGCTGATTTGATTCCGGTTGAAAAGGCAGCTTAGTAGCAGCAGCAGCAGCAGCAGCA A CAACGCTTCCGCACACCTACTTTACACCGATAGCAACAACGCGAAGACTCCCCGCAGGAACAGAGTGCGTGAAATCATAAAAATGGATAAACGAACGGGCATGAAAATTGGATTACTCT CTTGCTGCTTGGAGTGTGTTCGGCGGTGAAAATCATCAACCTGAAAGTTCCCTCCACCTACCTGCTGGATCAGACGTCCAAAACGCCAGACCCGCTAATACTGGACTGCGAGTACGAGGTGGACGAAAGCGAGAAGGGATTCGTGTTAAAATGGCTCCTGGACGGTCAACCGGGTCTACCAGTGGATACCGTCGAAAAATCCATTCCCCTTCCAATCTTTTAAGAACCGTGTCGACACCAGCTACGTTCGTGTCG]
consensusID : consensus_3601#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 660 fasta sequence
[CCGGACGGTTCGAAACTACCGCCATCGTTTGTCGCGCGTTCGTGTTCGTCGTCTGTTGTCACCTTTCGCTGTTTTGGGTGCACTGGGTGCGTCTATGTGTGTGAGTGTGTGAGTGTTTTTAGCAAACGAATCCTTCTTCCAAGCGTGAAAGCGAGCGTTTCTTGTCAAAGTGCGACATATTTCCCAAAAGCAATTGCAAATAAAATGTGAAACCAAGTTGGTTGGTCGCGATCGATCGGCGAATCCGGTTCCGGAAGTGTTGTAAAGTAACTGTGGCAAGTGGCAGATAAAGCAAAGTGCAAGTAAAGCATTAAAGTGTGTGTGTATGTGTGTGTGTCTGTGCCGTGGTTAGATAAAATCCCTTCGCAAACCCGCGTGCTGTAGCAGCATCCGTGTGTGCTCCCGATGTGGTCCAGGTGATTCTGGTACACCTTGTCTGTGTGTACGTGCGTGTGTGTGTTTCTTCCTCCTCCTTTTTGCTTGTAGAATTACCTCCCTCCAATCTCCCCACCATCTTTAAAATTTTCCCGCAAGGGAAAAGGCGGCGAAAACAAAACCCTATCACAGTGCCCTAAAGGGAAATGTTGCAGGAGTGAATGTGTGTGTGTTCATGTGCTTGTCTCGGGTTTTCTTCTCCCCACTTTCCACCATCTCGTGAAG]
[+] EMBL BM581743 [CCGGACGGTTCGAAACTACCGCCATCGTTTGTCGCGCGTTCGTGTTCGTCGTCTGTTGTCACCTTTCGCTGTTTTGGGTGCACTGGGTGCGTCTATGTGTGTGAGTGTGTGAGTGTTTTTAGCAAACGAATCCTTCTTCCAAGCGTGAAAGCGAGCGTTTCTTGTCAAAGTGCGACATATTTCCCAAAAGCAATTGCAAATAAAATGTGAAACCAAGTTGGTTGGTCGCGATCGATCGGCGAATCCGGTTCCGGAAGTGTTGTAAAGTAACTGTGGCAAGTGGCAGATAAAGCAAAGTGCAAGTAAAGCATTAAAGTGTGTGTGTATGTGTGTGTGTCTGTGCCGTGGTTAGATAAAATCCCTTCGCAAACCCGCGTGCTGTAGCAGCATCCGTGTGTGCTCCCGATGTGGTCCAGGTGATTCTGGTACACCTTGTCTGTGTGTACGTGCGTGTGTGTGTTTCTTCCTCCTCCTTTTTGCTTGTAGAATTACCTCCCTCCAATCTCCCCACCATCTTTAAAATTTTCCCGCAAGGGAAAAGGCGGCGAAAACAAAACCCTATCACAGTGCCCTAAAGGGAAATGTTGCAGGAGTGAATGTGTGTGTGTTCATGTGCTTGTCTCGGGTTTTCTTCTCCCCACTTTCCACCATCTCGTGAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3601#0 ------------------------------------------------------------
consensus_3601#1 CCGGACGGTTCGAAACTACCGCCATCGTTTGTCGCGCGTTCGTGTTCGTCGTCTGTTGTC 60
consensus_3601#0 ------------------------------------------------------------
consensus_3601#1 ACCTTTCGCTGTTTTGGGTGCACTGGGTGCGTCTATGTGTGTGAGTGTGTGAGTGTTTTT 120
consensus_3601#0 ------------------------------------------------------------
consensus_3601#1 AGCAAACGAATCCTTCTTCCAAGCGTGAAAGCGAGCGTTTCTTGTCAAAGTGCGACATAT 180
consensus_3601#0 ------------------------------------------CCGCCGCCATCGTTTGTC 18
consensus_3601#1 TTCCCAAAAGCAATTGCAAATAAAATGTGAAACCAAGTTGGTTGGTCGCGATCGATCG-- 238
* *** **** * *
consensus_3601#0 GCGCGTTCGTGTTCGTCGTCTGTTGTCACCTTTCGCTGTTTTGGGTGCACTGGGTCTATG 78
consensus_3601#1 GCGAATCCG-GTTCCGGAAGTGTTGTAAAGTAACTGTGGCAAGTGGCAGATAAAGCAAAG 297
*** * ** **** ****** * * * ** * * * * * *
consensus_3601#0 TGTGTGAGTGTCATTAAAGTGTGTGTGTATGTGTGTGTGTCTGTGCCGTGGTTAGGTAAA 138
consensus_3601#1 TGCAAGTAAAGCATTAAAGTGTGTGTGTATGTGTGTGTGTCTGTGCCGTGGTTAGATAAA 357
** * ******************************************** ****
consensus_3601#0 ATCCCTTCGCAAACCCGCGTGCTGTAGCAGCATCCGTGTGTGCTCCCGATGTGGTCCAGG 198
consensus_3601#1 ATCCCTTCGCAAACCCGCGTGCTGTAGCAGCATCCGTGTGTGCTCCCGATGTGGTCCAGG 417
************************************************************
consensus_3601#0 TGATTCTGGTACACCTTGTCTGTGTGTACGTGCGTGTGTGTGTTTCTTCCTCCTCCTTTT 258
consensus_3601#1 TGATTCTGGTACACCTTGTCTGTGTGTACGTGCGTGTGTGTGTTTCTTCCTCCTCCTTTT 477
************************************************************
consensus_3601#0 TGCTTGTAAAATTTCATCCCCCCA--CCCCACACCATCTTTAAAATTTTCCCGCAAGGGA 316
consensus_3601#1 TGCTTGTAGAATTACCTCCCTCCAATCTCCCCACCATCTTTAAAATTTTCCCGCAAGGGA 537
******** **** * **** *** * ** *****************************
consensus_3601#0 AAAGGCGGCGATAACAAAACCCTATCACAGTGCCCAACAGTGGGAAGTGTTGCAGGAGTG 376
consensus_3601#1 AAAGGCGGCGAAAACAAAACCCTATCACAGTGCCCTAAA--GGGAAATGTTGCAGGAGTG 595
*********** *********************** * * ***** *************
consensus_3601#0 A--GTGTGTGTGTTCATGTGCTTGTCTCGTGTTTTCTTCTCCCCACTTTCCACCATCTCG 434
consensus_3601#1 AATGTGTGTGTGTTCATGTGCTTGTCTCGGGTTTTCTTCTCCCCACTTTCCACCATCTCG 655
* ************************** ******************************
consensus_3601#0 TGAAGCGTGTTTCTCGACAAGTTTCCCTCACTCAGCTGATTTGATTCCGGTTGAAAAGGC 494
consensus_3601#1 TGAAG------------------------------------------------------- 660
*****
consensus_3601#0 AGCTTAGTAGCAGCAGCAGCAGCAACAGCAGTAGCAACGCTTCCGCACACCTACTTTACA 554
consensus_3601#1 ------------------------------------------------------------
consensus_3601#0 CCGATAGCAACAACGCGAAGACTGCCCGCAGGAACAGAGTGCGTGAAATCATAAAAATGG 614
consensus_3601#1 ------------------------------------------------------------
consensus_3601#0 ATAAACGAACGGGCATGAAAATTGGATTACTCTGCGTGCTGCTTGGAGTGTGTTCGGCGG 674
consensus_3601#1 ------------------------------------------------------------
consensus_3601#0 TGAAAATCATCAACCTGAAAGTTCCCTCCACCTACCTGCTGGATCAGACGTCCAAAACGC 734
consensus_3601#1 ------------------------------------------------------------
consensus_3601#0 CAGACCCGCTAATACTGGACTGCGAGTACGAGGTGGACGAAAGCGAGAAGGGATTCGTGT 794
consensus_3601#1 ------------------------------------------------------------
consensus_3601#0 TAAAATGGCTCCTGGACGGTCAACCGGGTCTACCAGTGGATACCGTCGAAAAATCCATTC 854
consensus_3601#1 ------------------------------------------------------------
consensus_3601#0 CCCTTCCAATCTTTTAAGAACCGTGTCGACACCAGCTACGTTCGTGTCG 903
consensus_3601#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||