cluster # 3932

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Anopheles gambiae
cluster # 3932 cluster # 3932 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3932#0 length = 990 sequences # 1

consensus_3932#1 length = 723 sequences # 1
consensus_3932#2 length = 713 sequences # 1

consensusID : consensus_3932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 990
fasta sequence

                              [AATACCCGAGGTTAAACTTATGAACACGAAAAACCTGACCATCCCCCTATNAAACATTANTATTATTCGAACTGATGTATNTTCACACAANTGCGTNACATGGTGGTTCACACGGGCATATACAAACATATTGCCTCCTGCACATCTATACAAGCTTTAATTAACCGAACTTTTCCAACACATTACACGATAAGTATGTGTGGAAACGTCCCAACAGAATATGTTGAATATAATTCGCACAATTCTCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGNTCCAGCAGCAAATACTAATTCAATTCAATTTTGGGCGGGTAAACTATGTGATCTTTTCGTTTTAAATTAGATTCACCTAATTCTTGTTNTNGAATGGTATCTAGTTTACTGNATTAAACGTTCTAGTTATTAAATTCGTNTAGTNGCTGTTTAACANATTAAAACATCATAAATTGGGNNAACTGAAAACCCCTAACAGCAAAACCTACAATNTGANATAGATAATCATTTAGGGCCAAATGNACAGAGTGAACAGAAACCTCTCAAAAACGCATCAATCGTNAAGGTGACACAAGTTAGTCCTTTACAATCCAACTGCGGCTCAGCAACAATTTNGGACGTCCCNTCTATAATGATCCCAGCAGCGGGGATTGTGTAACAGCACGAAACAGAAACCAATCCTTAAATNATTACCTCCCTGGCANTGGTGGTCAGAAATCAATGGAGGGGTGTGTTGTATTCCCTCCTNTGTACCTGGTGTCAAGGTCTGCNCACCTATTAATATAAGGAACNGACTATCTGGGTACNATGGGGAACATACGGTGCCCANNGCAGAGGCGCACNNACNCATNGNTGTGAGNTNGAACTNACACTAAATGGTGGTNGGNGGTAACAGTTTANACCACATTGAAACGGATGNCCTGGCACGACGATTGTCTTACCCTTNTATNNNTGGGGAGGCGCANNGCGACCAGAGAG]

[+] EMBL AL932722             [AATACCCGAGGTTAAACTTATGAACACGAAAAACCTGACCATCCCCCTATNAAACATTANTATTATTCGAACTGATGTATNTTCACACAANTGCGTNACATGGTGGTTCACACGGGCATATACAAACATATTGCCTCCTGCACATCTATACAAGCTTTAATTAACCGAACTTTTCCAACACATTACACGATAAGTATGTGTGGAAACGTCCCAACAGAATATGTTGAATATAATTCGCACAATTCTCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGNTCCAGCAGCAAATACTAATTCAATTCAATTTTGGGCGGGTAAACTATGTGATCTTTTCGTTTTAAATTAGATTCACCTAATTCTTGTTNTNGAATGGTATCTAGTTTACTGNATTAAACGTTCTAGTTATTAAATTCGTNTAGTNGCTGTTTAACANATTAAAACATCATAAATTGGGNNAACTGAAAACCCCTAACAGCAAAACCTACAATNTGANATAGATAATCATTTAGGGCCAAATGNACAGAGTGAACAGAAACCTCTCAAAAACGCATCAATCGTNAAGGTGACACAAGTTAGTCCTTTACAATCCAACTGCGGCTCAGCAACAATTTNGGACGTCCCNTCTATAATGATCCCAGCAGCGGGGATTGTGTAACAGCACGAAACAGAAACCAATCCTTAAATNATTACCTCCCTGGCANTGGTGGTCAGAAATCAATGGAGGGGTGTGTTGTATTCCCTCCTNTGTACCTGGTGTCAAGGTCTGCNCACCTATTAATATAAGGAACNGACTATCTGGGTACNATGGGGAACATACGGTGCCCANNGCAGAGGCGCACNNACNCATNGNTGTGAGNTNGAACTNACACTAAATGGTGGTNGGNGGTAACAGTTTANACCACATTGAAACGGATGNCCTGGCACGACGATTGTCTTACCCTTNTATNNNTGGGGAGGCGCANNGCGACCAGAGAG]




>consensus_3932#0
AATACCCGAGGTTAAACTTATGAACACGAAAAACCTGACCATCCCCCTATNAAACATTAN
TATTATTCGAACTGATGTATNTTCACACAANTGCGTNACATGGTGGTTCACACGGGCATA
TACAAACATATTGCCTCCTGCACATCTATACAAGCTTTAATTAACCGAACTTTTCCAACA
CATTACACGATAAGTATGTGTGGAAACGTCCCAACAGAATATGTTGAATATAATTCGCAC
AATTCTCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGNTCCAGCAGC
AAATACTAATTCAATTCAATTTTGGGCGGGTAAACTATGTGATCTTTTCGTTTTAAATTA
GATTCACCTAATTCTTGTTNTNGAATGGTATCTAGTTTACTGNATTAAACGTTCTAGTTA
TTAAATTCGTNTAGTNGCTGTTTAACANATTAAAACATCATAAATTGGGNNAACTGAAAA
CCCCTAACAGCAAAACCTACAATNTGANATAGATAATCATTTAGGGCCAAATGNACAGAG
TGAACAGAAACCTCTCAAAAACGCATCAATCGTNAAGGTGACACAAGTTAGTCCTTTACA
ATCCAACTGCGGCTCAGCAACAATTTNGGACGTCCCNTCTATAATGATCCCAGCAGCGGG
GATTGTGTAACAGCACGAAACAGAAACCAATCCTTAAATNATTACCTCCCTGGCANTGGT
GGTCAGAAATCAATGGAGGGGTGTGTTGTATTCCCTCCTNTGTACCTGGTGTCAAGGTCT
GCNCACCTATTAATATAAGGAACNGACTATCTGGGTACNATGGGGAACATACGGTGCCCA
NNGCAGAGGCGCACNNACNCATNGNTGTGAGNTNGAACTNACACTAAATGGTGGTNGGNG
GTAACAGTTTANACCACATTGAAACGGATGNCCTGGCACGACGATTGTCTTACCCTTNTA
TNNNTGGGGAGGCGCANNGCGACCAGAGAG

consensusID : consensus_3932#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 723
fasta sequence

                              [CAGAATCGCNGACGGTTAATGCTAAAATGATGTTTAAAGCGGCATATACAAACATATTGCCTCCTGCACATCTATACAAGCTTTATTACCGAACTTTTCCAGCACATTACACGATAAGTATGGTGGAAAGCGTCCAAAAGAATATGTTGAATATAATTCGCACAATTTCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGCTCCAGCAGCAAATACAAATGACATTAATTTGGGCGTGTAAACTATGTGATCTTTTGTTTTAAATTAGATTCACCTAATTTCTGTTTGAATGGTATCTAGTTTAACTGTTTAAACGTTTTAGTTATTAACTTCGTTTTGTTTGTTTAACAATTAAAACATCATAACTTGGAACTGAAACCCCCTAGCAGCAAAACTAAATTTGAACATAGATCAANATTCTTTCTCTAGGCACAATGANAGAGTGAACAGAAACCTCTCAAAACGCATCAATCGTAAGGTGAAACAAGTAGTCTNTTTCACATCAATTGCGCTAGCCAAATTNGCAGTCCATCTTTAATGATCCGGAAGGAGCCGGGATGTGTAACCGAGAAACAGGAAACAACATCTAATTGTACCTCCTGCATGGTGTCACAAGCATGGAGGGGTGTGTGTNATACTATTCTTATCGTACCTCGTGTCAAGTCTTGTGAGCTTATTANATNATAGCGACACAGATCANTTGGTTTATCA]

[+] EMBL AL696267             [CAGAATCGCNGACGGTTAATGCTAAAATGATGTTTAAAGCGGCATATACAAACATATTGCCTCCTGCACATCTATACAAGCTTTATTACCGAACTTTTCCAGCACATTACACGATAAGTATGGTGGAAAGCGTCCAAAAGAATATGTTGAATATAATTCGCACAATTTCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGCTCCAGCAGCAAATACAAATGACATTAATTTGGGCGTGTAAACTATGTGATCTTTTGTTTTAAATTAGATTCACCTAATTTCTGTTTGAATGGTATCTAGTTTAACTGTTTAAACGTTTTAGTTATTAACTTCGTTTTGTTTGTTTAACAATTAAAACATCATAACTTGGAACTGAAACCCCCTAGCAGCAAAACTAAATTTGAACATAGATCAANATTCTTTCTCTAGGCACAATGANAGAGTGAACAGAAACCTCTCAAAACGCATCAATCGTAAGGTGAAACAAGTAGTCTNTTTCACATCAATTGCGCTAGCCAAATTNGCAGTCCATCTTTAATGATCCGGAAGGAGCCGGGATGTGTAACCGAGAAACAGGAAACAACATCTAATTGTACCTCCTGCATGGTGTCACAAGCATGGAGGGGTGTGTGTNATACTATTCTTATCGTACCTCGTGTCAAGTCTTGTGAGCTTATTANATNATAGCGACACAGATCANTTGGTTTATCA]




>consensus_3932#1
CAGAATCGCNGACGGTTAATGCTAAAATGATGTTTAAAGCGGCATATACAAACATATTGC
CTCCTGCACATCTATACAAGCTTTATTACCGAACTTTTCCAGCACATTACACGATAAGTA
TGGTGGAAAGCGTCCAAAAGAATATGTTGAATATAATTCGCACAATTTCACTTGGATTTT
CCACCCTATGTTCGCAGTGTCAGGTAATAAGGCTCCAGCAGCAAATACAAATGACATTAA
TTTGGGCGTGTAAACTATGTGATCTTTTGTTTTAAATTAGATTCACCTAATTTCTGTTTG
AATGGTATCTAGTTTAACTGTTTAAACGTTTTAGTTATTAACTTCGTTTTGTTTGTTTAA
CAATTAAAACATCATAACTTGGAACTGAAACCCCCTAGCAGCAAAACTAAATTTGAACAT
AGATCAANATTCTTTCTCTAGGCACAATGANAGAGTGAACAGAAACCTCTCAAAACGCAT
CAATCGTAAGGTGAAACAAGTAGTCTNTTTCACATCAATTGCGCTAGCCAAATTNGCAGT
CCATCTTTAATGATCCGGAAGGAGCCGGGATGTGTAACCGAGAAACAGGAAACAACATCT
AATTGTACCTCCTGCATGGTGTCACAAGCATGGAGGGGTGTGTGTNATACTATTCTTATC
GTACCTCGTGTCAAGTCTTGTGAGCTTATTANATNATAGCGACACAGATCANTTGGTTTA
TCA

consensusID : consensus_3932#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 713
fasta sequence

                              [GAATCGCCGAGGTTAGGTGAAACAAGTAGTCTTTTAAATCATTGCGCTAGCAAAATTTGCAGTCCATCTTTAATGATCCAAGAGCGGATGTGTAACGAGAAACAGAAACAACATCTAATTATACCTCCTGCATGGTGTCAGAAGCATGGAGGGGTGTGTGTTTTCCCTCTTTTTGTTCTTGTGTCAAGTCTTGTGAGCTTATTAATTATAGGAACAGATTATTTGGTTTTATCATTTGCTTATCACTACTGTTTGCTCCAATGCAAAATGCAACATAACACTAATAGTGTGTGTAAGTGTGGCAAAACTTAGCTAGTTTTATGTTTGTTTGTGTACTGCTTAGTATTAAGACTGATTATCAATAAACCAGACAAAACATTTAATACAGAAAAACAAACAAGGAATATCTGCACGTCATCCAAATTGAAGGGGAACTCTAAACTAGGTAATCCAAATGGATAACAAACAGTGTTGATGTGCATTCGATTCAGCTCAAGCGTAAACTCAAACAACAGATCGACATCACCATTCCCGAGTNGATGGTGAAATAACGGTAACAGTGAATTGGTGGGGCTACACCCCAGCATAAGGTCACGCTTCACGAAAAGGCNTTTTTTTCTATTTGCCGACGCTTCCTCGCGGTTAANATGTGCATTTTTAAAGTAAGCCAAAACGGNATTATTTCATCCCATAACACAAATCTCTCGCTGCCG]

[+] EMBL AL934734             [GAATCGCCGAGGTTAGGTGAAACAAGTAGTCTTTTAAATCATTGCGCTAGCAAAATTTGCAGTCCATCTTTAATGATCCAAGAGCGGATGTGTAACGAGAAACAGAAACAACATCTAATTATACCTCCTGCATGGTGTCAGAAGCATGGAGGGGTGTGTGTTTTCCCTCTTTTTGTTCTTGTGTCAAGTCTTGTGAGCTTATTAATTATAGGAACAGATTATTTGGTTTTATCATTTGCTTATCACTACTGTTTGCTCCAATGCAAAATGCAACATAACACTAATAGTGTGTGTAAGTGTGGCAAAACTTAGCTAGTTTTATGTTTGTTTGTGTACTGCTTAGTATTAAGACTGATTATCAATAAACCAGACAAAACATTTAATACAGAAAAACAAACAAGGAATATCTGCACGTCATCCAAATTGAAGGGGAACTCTAAACTAGGTAATCCAAATGGATAACAAACAGTGTTGATGTGCATTCGATTCAGCTCAAGCGTAAACTCAAACAACAGATCGACATCACCATTCCCGAGTNGATGGTGAAATAACGGTAACAGTGAATTGGTGGGGCTACACCCCAGCATAAGGTCACGCTTCACGAAAAGGCNTTTTTTTCTATTTGCCGACGCTTCCTCGCGGTTAANATGTGCATTTTTAAAGTAAGCCAAAACGGNATTATTTCATCCCATAACACAAATCTCTCGCTGCCG]




>consensus_3932#2
GAATCGCCGAGGTTAGGTGAAACAAGTAGTCTTTTAAATCATTGCGCTAGCAAAATTTGC
AGTCCATCTTTAATGATCCAAGAGCGGATGTGTAACGAGAAACAGAAACAACATCTAATT
ATACCTCCTGCATGGTGTCAGAAGCATGGAGGGGTGTGTGTTTTCCCTCTTTTTGTTCTT
GTGTCAAGTCTTGTGAGCTTATTAATTATAGGAACAGATTATTTGGTTTTATCATTTGCT
TATCACTACTGTTTGCTCCAATGCAAAATGCAACATAACACTAATAGTGTGTGTAAGTGT
GGCAAAACTTAGCTAGTTTTATGTTTGTTTGTGTACTGCTTAGTATTAAGACTGATTATC
AATAAACCAGACAAAACATTTAATACAGAAAAACAAACAAGGAATATCTGCACGTCATCC
AAATTGAAGGGGAACTCTAAACTAGGTAATCCAAATGGATAACAAACAGTGTTGATGTGC
ATTCGATTCAGCTCAAGCGTAAACTCAAACAACAGATCGACATCACCATTCCCGAGTNGA
TGGTGAAATAACGGTAACAGTGAATTGGTGGGGCTACACCCCAGCATAAGGTCACGCTTC
ACGAAAAGGCNTTTTTTTCTATTTGCCGACGCTTCCTCGCGGTTAANATGTGCATTTTTA
AAGTAAGCCAAAACGGNATTATTTCATCCCATAACACAAATCTCTCGCTGCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3932#0      AATACCCGAGGTTAAACTTATGAACACGAAAAACCTGACCATCCCCCTATNAAACATTAN 60
consensus_3932#1      ------------------------------------------------------------
consensus_3932#2      ------------------------------------------------------------
                                                                                  

consensus_3932#0      TATTATTCGAACTGATGTATNTTCACACAANTGCGTNACATGGTGGTTCACACGGGCATA 120
consensus_3932#1      ------CAGAATCGCNGACGGTT------AATGC-TAAAATGATG-TTTAAAGCGGCATA 46
consensus_3932#2      --------GAATCGCCGAGGTTA------GGTGAAACAAGTAGTCTTTTAAATCA--TTG 44
                              ***  *  *    *         **    *  *  *  ** * *      * 

consensus_3932#0      TACAAACATATTGCCTCCTGCACATCTATACAAGCTTTAATTAACCGAACTTTTCCAACA 180
consensus_3932#1      TACAAACATATTGCCTCCTGCACATCTATACAAGCTTTATT--ACCGAACTTTTCCAGCA 104
consensus_3932#2      CGCTAGCAAAAT--TTGCAGTCCATCTTTA-ATGATCCAAG--AGCGGA--TGTGTAACG 97
                        * * ** * *   * * *  ***** ** * * *  *    * ** *  * *  * * 

consensus_3932#0      CATTACACGATAAGTATGTGTGGAAACGTCCCAACAGAATATGTTGAATATAATTCGCAC 240
consensus_3932#1      CATTACACGATAAGTATG-GTGGAAAGCGTCCAAAAGAATATGTTGAATATAATTCGCAC 163
consensus_3932#2      AGAAACAGAAACAACATCTAATTATACCTCCT------GCATGGTGTCAGAAGCATGGAG 151
                          ***  *  *  **      * *    *         *** **     *    * * 

consensus_3932#0      AATTCTCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGNTCCAGCAGC 300
consensus_3932#1      AATT-TCACTTGGATTTTCCACCCTATGTTCGCAGTGTCAGGTAATAAGGCTCCAGCAGC 222
consensus_3932#2      GGGT-----GTGTGTTTTCCCTCTTTTTGTTCTTGTGTCAAGTCTTGTGAGCTTATTAAT 206
                         *      **  ******  * * *  *    ****** **  *  *     *  *  

consensus_3932#0      AAATACTAATTCAATTCAATTTTGGGCGGGTAAACTATGTGATCTTTTCGTTTTAAATTA 360
consensus_3932#1      AAATACAAATGACATTAA--TTTGGGCGTGTAAACTATGTGATCTTTT-GTTTTAAATTA 279
consensus_3932#2      TA-TAGGAAC-AGATTA---TTTGGTTTTATCATTTGCTTATCACTACTGTTT--GCTCC 259
                       * **  **    ***    *****     * *  *   *     *   ****    *  

consensus_3932#0      GATTCACCTAATTCTTGTTNTNGAATGGTATCTAGTTTACTGNATTAAACGTTCTAGTTA 420
consensus_3932#1      GATTCACCTAATTTCTGTTT--GAATGGTATCTAGTTTAACTGTTTAAACGTTTTAGTTA 337
consensus_3932#2      AATGCAAAATGCAACATAACACTAATAGTGTGT-GTAAGTGTGGCAAAACTTAGCTAGTT 318
                       ** **                 *** ** * * **          **** *      * 

consensus_3932#0      TTAAATTCGTNTAGTNGCTGTTTAACANATTAAAAC--ATCATAAATTGGGNNAACTGAA 478
consensus_3932#1      TTAACTTCGTTTTGTT--TGTTTAACAA-TTAAAAC--ATCATAACTTGG---AACTGAA 389
consensus_3932#2      TTATGTTTGTTTGTGTACTGCTTAGTA--TTAAGACTGATTATCAATAAACCAGACAAAA 376
                      ***  ** ** *      ** ***  *  **** **  ** ** * *       **  **

consensus_3932#0      AACCCCTAACAGCAAAACCTACAATNTGANATAGATAATCATT-----TAGGGCCAAATG 533
consensus_3932#1      ACCCCCTAGCAGCAAAAC-TAAATTTGAACATAGATCAANATTCTTTCTCTAGGCACAAT 448
consensus_3932#2      CATTTAATACAGAAAAAC---AAACAAGGAATATCTGCACGTC--------ATCCAAATT 425
                               *** *****    *       ***  *     *            ** *  

consensus_3932#0      NACAGAGTGAACAGAAACCTCTCAAAAACGCATCAATCGTNAAGGTGACACAAGTTAGTC 593
consensus_3932#1      GANAGAGTGAACAGAAACCTCTCAAAA-CGCATCAATCGTAA-GGTGAAACAAGT-AGTC 505
consensus_3932#2      GAAGGG--GAACTCTAAACTAGGTAATCCAAATGGATAACAAACAGTGTTGATGTGCATT 483
                       *  *   ****   ** **    **  *  **  **    *         * **   * 

consensus_3932#0      CTTTACAATCCAACTGCGGCTCAGCAACAATTTNGGACGTCCCNTCTATAATGATCCC-- 651
consensus_3932#1      TNTTTCACATCAATTGCG--CTAGC--CAAATTNG--CAGTCCATCTTTAATGATCCGGA 559
consensus_3932#2      CGATTCAGCTCAAGCGTA----AACT-CAAACAA---CAGATCGACATCACCATTCCC-- 533
                         * **   ***  *      * *  ***       *    *  *   *    ***   

consensus_3932#0      AGCAGCGGGGATTGTGTAACAGCACGAAACAGAAACCAATCCTTAAATNATTACCTCCCT 711
consensus_3932#1      AGGAGCCGGGAT-GTGTAAC--CGAGAAACAGGAAACAACATCTAATTG--TACCTCCT- 613
consensus_3932#2      ----GAGTNGATGGTGAAAT-------AACGGTAACAGTGAATTGGTGGGGCTACACCCC 582
                          *    *** *** **        *** * **        *          * **  

consensus_3932#0      GGCANTGGTGGTCAGAAATCAATGGAGGGGTGTGTTGTATTCCCTCCTNTG-TACCTGGT 770
consensus_3932#1      -GCAT-GGTG-TCACAAGCATGGAGGGGTGTGTGTNATACTATTCTTATCG-TACCTCGT 669
consensus_3932#2      AGCAT--AAGGTCACGCTTCACGAAAAGGCNTTTTTTTCTATTTGCCGACGCTTCCTCGC 640
                       ***     * ***             *    * *  *            * * *** * 

consensus_3932#0      GTCAAGGTCTGCNCACCTATTAA--TATAAGGA-ACNGA-CTATCTGGGT--ACNATGGG 824
consensus_3932#1      GTCAAGTCTTGTGAGCTTATTANATNATAGCGACACAGA-TCANTTGGTTT-ATCA---- 723
consensus_3932#2      GGTTAANA-TGTGCATTT-TTAAAGTAAGCCAAAACGGNATTATTTCATCCCATAACACA 698
                      *   *    **      * ***    *     * ** *    *  *      *  *    

consensus_3932#0      GAACATACGGTGCCCANNGCAGAGGCGCACNNACNCATNGNTGTGAGNTNGAACTNACAC 884
consensus_3932#1      ------------------------------------------------------------
consensus_3932#2      AATCTCTCGCTGCCG--------------------------------------------- 713
                                                                                  

consensus_3932#0      TAAATGGTGGTNGGNGGTAACAGTTTANACCACATTGAAACGGATGNCCTGGCACGACGA 944
consensus_3932#1      ------------------------------------------------------------
consensus_3932#2      ------------------------------------------------------------
                                                                                  

consensus_3932#0      TTGTCTTACCCTTNTATNNNTGGGGAGGCGCANNGCGACCAGAGAG 990
consensus_3932#1      ----------------------------------------------
consensus_3932#2      ----------------------------------------------