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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3983#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 678 fasta sequence
[CCGCGCAAATCGGTTGTGCTCGGTGTAATATTTCTCTCAGCTGTCAGTGTCATTGCGGTCGATCGAACACCCTTAAGGTACGTTCCCTTCCGGTGTCGAGGTGGCATTTCCGTGTCGATAACGTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCGGAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGATGAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGGAAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGCTTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCTCGGCACAATCGATGTACAACCGGTGACGATGGCCACGGTGCAAGGGAATCCATGTCCGAAAGGAGAGTTCTTAGCCGGAGAAGGAAGTGCCAAGTCTTGTATGAAGTGTTTCTGTTCTGGCGTCAGTGATCTGTGCCACAAAGCAGATATGTACCGGTGGAATAACACACTGGCGTTGAACGACTGGAAAATGAGATACGCAACGTGGGGATGGCAAAGGTACTGTGAAGATAGAGCACAACATCCAGAATTTCTCTTCAAC]
[+] EMBL BM598004 [CCGCGCAAATCGGTTGTGCTCGGTGTAATATTTCTCTCAGCTGTCAGTGTCATTGCGGTCGATCGAACACCCTTAAGGTACGTTCCCTTCCGGTGTCGAGGTGGCATTTCCGTGTCGATAACGTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCGGAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGATGAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGGAAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGCTTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCTCGGCACAATCGATGTACAACCGGTGACGATGGCCACGGTGCAAGGGAATCCATGTCCGAAAGGAGAGTTCTTAGCCGGAGAAGGAAGTGCCAAGTCTTGTATGAAGTGTTTCTGTTCTGGCGTCAGTGATCTGTGCCACAAAGCAGATATGTACCGGTGGAATAACACACTGGCGTTGAACGACTGGAAAATGAGATACGCAACGTGGGGATGGCAAAGGTACTGTGAAGATAGAGCACAACATCCAGAATTTCTCTTCAAC]
[+] EMBL BX603126 [ aCGCAAATCGGTTGTGCTCGGTGTAATATTTCTCTCAGCTGTCAGTGTCATTGCGGTCGATCGAACACCCTTAAGGTACGTTCCCTTCCGGTGTCGAGGTGGCATTTCCGTGTCGATAACGTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCGGAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGATGAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGGAAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGCTTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCT ]
consensusID : consensus_3983#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 556 fasta sequence
[CAGATCGCCNGAGGTTCNNTCGGTGTCGAGGTGGCATTTCGTGTCGATAACTGTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCGGAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGATGAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGGAAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGCTTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCTCGGACAATCGATGTACAACGGTGACGATGGCCACGGTGCAAGGGAATCCATGTCCGAAAGGAGAGTTCTTAGCCGGAGAAGGAAGTGCCAAGTCTTGTATGAAGTGTCTCTGTTCTGGCGTCAGTGATCTGTGCCACAAAGCAGATATGTACCGGTGGAATAACACACTGGCGTTGAACGACTGGAAAATGAGATACGCAACGTGGGATG]
[+] EMBL AL697166 [CAGATCGCCNGAGGTTCNNTCGGTGTCGAGGTGGCATTTCGTGTCGATAACTGTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCGGAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGATGAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGGAAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGCTTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCTCGGACAATCGATGTACAACGGTGACGATGGCCACGGTGCAAGGGAATCCATGTCCGAAAGGAGAGTTCTTAGCCGGAGAAGGAAGTGCCAAGTCTTGTATGAAGTGTCTCTGTTCTGGCGTCAGTGATCTGTGCCACAAAGCAGATATGTACCGGTGGAATAACACACTGGCGTTGAACGACTGGAAAATGAGATACGCAACGTGGGATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3983#0 CCGCGCAAATCGGTTGTGCTCGGTGTAATATTTCTCTCAGCTGTCAGTGTCATTGCGGTC 60
consensus_3983#1 ------------------------------------------------------------
consensus_3983#0 GATCGAACACCCTTAAGGTACGTTCCCTTCCGGTGTCGAGGTGGCATTTCCGTGTCGATA 120
consensus_3983#1 ---CAGAT-CGCCNGAGGTTCNNTC------GGTGTCGAGGTGGCATTTC-GTGTCGATA 49
* * * * **** * ** ******************* *********
consensus_3983#0 AC-GTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCG 179
consensus_3983#1 ACTGTTCCGTTGCGATGGGTTCGCTCACTGCCCGGATGGTTCAGATGAGGAAGGTTGTCG 109
** *********************************************************
consensus_3983#0 GAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGAT 239
consensus_3983#1 GAGCGTATCGCTCGTTGAAGGACCGCCTGAAAGCGTCACCGTGCAAGAGGGCGAGTGGAT 169
************************************************************
consensus_3983#0 GAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGG 299
consensus_3983#1 GAATCTAACGTGTCGGGGAACTGGCGTACCGTCCCCAAGTGTACGATGGAAAATGAATGG 229
************************************************************
consensus_3983#0 AAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGC 359
consensus_3983#1 AAAAGAGCTACTGGATCCGGTTTGTGATTGGGTCTCGGAGGATGGCGTTGGACATCTTGC 289
************************************************************
consensus_3983#0 TTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCTCGG 419
consensus_3983#1 TTGTAAGATGCGTCTGATAGATTCTGGGAATTATTCCTGTCATTTGGTAAATCCGCTCGG 349
************************************************************
consensus_3983#0 CACAATCGATGTACAACCGGTGACGATGGCCACGGTGCAAGGGAATCCATGTCCGAAAGG 479
consensus_3983#1 -ACAATCGATGTACAAC-GGTGACGATGGCCACGGTGCAAGGGAATCCATGTCCGAAAGG 407
**************** ******************************************
consensus_3983#0 AGAGTTCTTAGCCGGAGAAGGAAGTGCCAAGTCTTGTATGAAGTGTTTCTGTTCTGGCGT 539
consensus_3983#1 AGAGTTCTTAGCCGGAGAAGGAAGTGCCAAGTCTTGTATGAAGTGTCTCTGTTCTGGCGT 467
********************************************** *************
consensus_3983#0 CAGTGATCTGTGCCACAAAGCAGATATGTACCGGTGGAATAACACACTGGCGTTGAACGA 599
consensus_3983#1 CAGTGATCTGTGCCACAAAGCAGATATGTACCGGTGGAATAACACACTGGCGTTGAACGA 527
************************************************************
consensus_3983#0 CTGGAAAATGAGATACGCAACGTGGGGATGGCAAAGGTACTGTGAAGATAGAGCACAACA 659
consensus_3983#1 CTGGAAAATGAGATACGCAACGTGGG-ATG------------------------------ 556
************************** ***
consensus_3983#0 TCCAGAATTTCTCTTCAAC 678
consensus_3983#1 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||