cluster # 414

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Anopheles gambiae
cluster # 414 cluster # 414 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_414#0 length = 252 sequences # 1

consensus_414#1 length = 213 sequences # 1

consensusID : consensus_414#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 252
fasta sequence

                              [CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTTTTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGCTTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTTCCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTACCGCCACCACCAC]

[+] EMBL BX466857             [CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTTTTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGCTTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTTCCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTACCGCCACCACCAC]




>consensus_414#0
CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTT
TTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGC
TTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTT
CCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTAC
CGCCACCACCAC

consensusID : consensus_414#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 213
fasta sequence

                              [ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTTGCTGCCAGTGCACTCCTCACCGCCCTGGTCACGGTCCACTGCCCATTCGCCACGATCCACTCCTCCTCAACCATCCACAACGACCGGGTGAACTACAACTCCCGCCCCGATCACACCCACTACCGCCAACTGGAACCAGGAACTGGGCAACGGTGACTAA]

[+] EMBL BX605292             [ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTTGCTGCCAGTGCACTCCTCACCGCCCTGGTCACGGTCCACTGCCCATTCGCCACGATCCACTCCTCCTCAACCATCCACAACGACCGGGTGAACTACAACTCCCGCCCCGATCACACCCACTACCGCCAACTGGAACCAGGAACTGGGCAACGGTGACTAA]




>consensus_414#1
ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTTGCTGCCA
GTGCACTCCTCACCGCCCTGGTCACGGTCCACTGCCCATTCGCCACGATCCACTCCTCCT
CAACCATCCACAACGACCGGGTGAACTACAACTCCCGCCCCGATCACACCCACTACCGCC
AACTGGAACCAGGAACTGGGCAACGGTGACTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_414#0      CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTT 60
consensus_414#1      -------ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTT 53
                             ** *     *               *   *    **     * *   * ***

consensus_414#0      TTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGC 120
consensus_414#1      GCTGCCAGTGCACTCCT-CACCGCCCTGGTC----ACGGTCCACTGCCCATTCGCCACGA 108
                       * *   * *  *  *   * *   ***      *** * **      ****   * * 

consensus_414#0      TTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTT 180
consensus_414#1      TCCACTCCT----CCTCAACCATCCACAACGACCGGGT---GAACTACAA--CTCCCGCC 159
                     * ***   *     * **  **    *   *** ****   *  *   **  *  *    

consensus_414#0      CCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTAC 240
consensus_414#1      CCGATCACACCCACTACCGCCAACTGGAACCAGGAACTGGGCAACG-GTGACTAA----- 213
                     ** * *   ***   ***  *   * *    ** *  *    **** * * * **     

consensus_414#0      CGCCACCACCAC 252
consensus_414#1      ------------