cluster # 4391

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Anopheles gambiae
cluster # 4391 cluster # 4391 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4391#0 length = 783 sequences # 1

consensus_4391#1 length = 644 sequences # 1
consensus_4391#2 length = 567 sequences # 1

consensusID : consensus_4391#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 783
fasta sequence

                              [AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGAGTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTCGTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCACGACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGCTTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAACAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCATCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGTGGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGGCGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCTATGTGTGCGTCTGTCCGCCGGGGCATATGATTGGGCGGAACAAGCGGTGCGAGGATATAGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTA]

[+] EMBL BX625433             [AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGAGTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTCGTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCACGACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGCTTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAACAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCATCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGTGGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGGCGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCTATGTGTGCGTCTGTCCGCCGGGGCATATGATTGGGCGGAACAAGCGGTGCGAGGATATAGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTA]




>consensus_4391#0
AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGA
GTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTC
GTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCAC
GACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGC
TTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAA
CAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCA
TCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGT
GGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGG
CGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCTATGTGTGCGT
CTGTCCGCCGGGGCATATGATTGGGCGGAACAAGCGGTGCGAGGATATAGATGAGTGTGC
GATGCACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCGGCTCGTA
CCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCACGGATGT
GGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATC
GTA

consensusID : consensus_4391#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence

                              [CCGCGGCTGGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCGAAGCAGCACAAAATCTACCAATGCACAGCTGGCCAGATAGCGGCCCGCCAGGGTCTCAGCTGCTCGCTCAAGGGTGACCATTCCGGGTCGGAGTTTTACACGGATTGCTGCGAAGCGTGCAAAATTGGGCTGGTGGTTGGCTCGAGCGCTAACAAGTGCTCGGTGGAACCGTTCGCCTTCGGAAGCCCCTGGGACGAGATCTATGACGCTTGCTGCAACGACATCAAGAAAGAAGGTGAAATCATACTCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCGATCTGCTCGCAGGTGTGCGAGAACGTCGAGGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGTACGAGCTGCTGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATGAAACGGTTGAGCGTAAAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTGAGGATGTGAACGAGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTCGAAACACACGCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC]

[+] EMBL BM589113             [CCGCGGCTGGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCGAAGCAGCACAAAATCTACCAATGCACAGCTGGCCAGATAGCGGCCCGCCAGGGTCTCAGCTGCTCGCTCAAGGGTGACCATTCCGGGTCGGAGTTTTACACGGATTGCTGCGAAGCGTGCAAAATTGGGCTGGTGGTTGGCTCGAGCGCTAACAAGTGCTCGGTGGAACCGTTCGCCTTCGGAAGCCCCTGGGACGAGATCTATGACGCTTGCTGCAACGACATCAAGAAAGAAGGTGAAATCATACTCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCGATCTGCTCGCAGGTGTGCGAGAACGTCGAGGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGTACGAGCTGCTGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATGAAACGGTTGAGCGTAAAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTGAGGATGTGAACGAGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTCGAAACACACGCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC]




>consensus_4391#1
CCGCGGCTGGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCGAAGCAGC
ACAAAATCTACCAATGCACAGCTGGCCAGATAGCGGCCCGCCAGGGTCTCAGCTGCTCGC
TCAAGGGTGACCATTCCGGGTCGGAGTTTTACACGGATTGCTGCGAAGCGTGCAAAATTG
GGCTGGTGGTTGGCTCGAGCGCTAACAAGTGCTCGGTGGAACCGTTCGCCTTCGGAAGCC
CCTGGGACGAGATCTATGACGCTTGCTGCAACGACATCAAGAAAGAAGGTGAAATCATAC
TCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCGATCTGCTCGCAGG
TGTGCGAGAACGTCGAGGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGTACGAGCTGC
TGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATGAAACGGTTGAGCGTA
AAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTGAGGATGTGAACG
AGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTCGAAACACACGCG
GCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC

consensusID : consensus_4391#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence

                              [CCGCCCACGCGTCCGGCCAGGTTTGTCGAAACACACTCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGCGACCCGGGCTACACACCGAAGAATGGCAAATGTGAAGACGTCAACGAGTGCGAGGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCGAGGGCTCGTACGAGTGTATCGCGGAGGTGAAGAATTATCCAACCCCGGCAAGAAAGAAGGTTGAAACGTGTACGCCCGGTTTCCGGCGTCATAATGATCAGTGCGTGGATATTGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCTGCGACTATGTGGACGACTGTGAGGAGTACA]

[+] EMBL BM599848             [CCGCCCACGCGTCCGGCCAGGTTTGTCGAAACACACTCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGCGACCCGGGCTACACACCGAAGAATGGCAAATGTGAAGACGTCAACGAGTGCGAGGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCGAGGGCTCGTACGAGTGTATCGCGGAGGTGAAGAATTATCCAACCCCGGCAAGAAAGAAGGTTGAAACGTGTACGCCCGGTTTCCGGCGTCATAATGATCAGTGCGTGGATATTGATGAGTGTGCGATGCACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCGGCTCGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCACGGATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGGGATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCTGCGACTATGTGGACGACTGTGAGGAGTACA]




>consensus_4391#2
CCGCCCACGCGTCCGGCCAGGTTTGTCGAAACACACTCGGCAGCTTCCTGTGCGTTGATG
TCGTCCTTCCGGACATTGCTTGCGACCCGGGCTACACACCGAAGAATGGCAAATGTGAAG
ACGTCAACGAGTGCGAGGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCG
AGGGCTCGTACGAGTGTATCGCGGAGGTGAAGAATTATCCAACCCCGGCAAGAAAGAAGG
TTGAAACGTGTACGCCCGGTTTCCGGCGTCATAATGATCAGTGCGTGGATATTGATGAGT
GTGCGATGCACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCGGCT
CGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCACGG
ATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATTGGG
GATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCTGCG
ACTATGTGGACGACTGTGAGGAGTACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4391#0      AAGCTGCGGCACTGGCTACACGCTCAACGCGGAAACGGGCCACTGTGATGATGACGATGA 60
consensus_4391#2      ------------------------------------------------------------
consensus_4391#1      ------------------------------------------------------------
                                                                                  

consensus_4391#0      GTGCGCGCTGGGACGTCACAACTGTCGGCCGCCGTTCGAATGCTTCAACACCAAGGGCTC 120
consensus_4391#2      ------------------------------------------------------------
consensus_4391#1      ------------------------------------------------------------
                                                                                  

consensus_4391#0      GTTCCGTTGCCGTCAGCTGTCGAGATATCACACGCTGACCAGTACGTCCACATCGACCAC 180
consensus_4391#2      ------------------------------------------------------------
consensus_4391#1      ----------------------------------------------------CCGCGGCT 8
                                                                                  

consensus_4391#0      GACCAGCACTACCACCGTGCGGCCCTCGTACAATCCTGCTGGGTACGGGCACTATCCGGC 240
consensus_4391#2      ------------------------------------------------------------
consensus_4391#1      GGGCTGCACGGGCTGTGCCTGTCGACCATCGAAATCTGCTGCTCG-AAGCAGCACAAAAT 67
                                                                                  

consensus_4391#0      TTCGCGATACTCTTCCTACCAGCCGCAGCTGCCACCGTGCGGCATAGGATTCGAGCGGAA 300
consensus_4391#2      --------------------------------------CCGCCCACGCGTCCGGCCAGGT 22
consensus_4391#1      CTACCAATGCACAGCTGGCCAGATAGCGGC-CCGCCAGGGTCTCAGCTGCTCGCTCAAGG 126
                                                                         **  *    

consensus_4391#0      CAGTGCGGGAGCGTGTGTCGATATTGACGAATGTGCCCGTGGAGCTAGCTGTCATCGCCA 360
consensus_4391#2      TTGTCGAAACACACTCGGCAGC-TTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTT 81
consensus_4391#1      GTGACCATTCCGGGTCGG-AGT-TTTACACGGATTGCTGCGAAGCGTGCAAAATTGGGCT 184
                        *             *      **        *    *     *   *     * *   

consensus_4391#0      TCAGCAGTGCATTAATACGAATGGATCGTACCGCTGCCGGGACCTGTTGACCTGTCCCGT 420
consensus_4391#2      GCGACCCGGGCTACACACCGAAGAATGGCA--AATGTGAAGAC--GTCAACGAGTGC-GA 136
consensus_4391#1      GGTGGTTGGCTCGAGCGCTAACAAGTGCTC--GGTGGAACCGTTCGCCTTCGGAAGC-CC 241
                              *        *  *    *        **         *    *     *   

consensus_4391#0      GGGATATCGCGTGAACGATGACATTACGGAGTGTCTAGACATCGACGAGTGTGCTACCGG 480
consensus_4391#2      GGAGGACGGTGCCTGCGACGAAGGATACCGTTGCGTCAACATCGA-GGGCTCG-TACGAG 194
consensus_4391#1      CTGGGACGAGATCTATGACG------CTTGCTGCAACGACATCAAGAAAGAAGGTGAAAT 295
                           *          ** *           **     ***** *       * *     

consensus_4391#0      CGAGGCACTGTGCGGGCCGGATCAGACGTGCAAAAACAAGAAGGGAGGCT---ATGTGTG 537
consensus_4391#2      TGTATCGCGGAG-GTGAAGAATTATCCA-ACCCCGGCAAGAAAGAAGGTTGAAACGTGTA 252
consensus_4391#1      CATACTCCTCAGTGGCAACGATGAGCAGAGCTTATGTGAGCAGTTTCCGTCG-ATCTGCT 354
                             *   * *      ** *      *       ** *       *   *  **  

consensus_4391#0      CGTCTGTCCGCCGGGGCATATGATTGGGCGGAACA-AGCGGTGCGAGGATATAGATGAGT 596
consensus_4391#2      CGCCCGGTTTCCGGCGT-----------CATAATG-ATCAGTGCGTGGATATTGATGAGT 300
consensus_4391#1      CGCAGGTGTGCGAGAACGTCGA---GGGCGGTTCGTATGTGTGCAAGTGCCATCCCGGGT 411
                      **   *    *  *              *       *   ****  *         * **

consensus_4391#0      GTGCGATGC---ACGGCTCGAAGGTGTGCCAGCAGAACTCGAACTGCGTCAATACGATCG 653
consensus_4391#2      GTGCGATGC---ACGGCTCGAAGGTGTGCCAGTAGAACTCGAACTGCGTCAATACGATCG 357
consensus_4391#1      ACGAGCTGCTGGACGACAGGAAAACCTGTGCCCTGGTTTCGGACGAGGATAATG-AAACG 470
                        * * ***   *** *  ***    **      *   *** **   *  ***   * **

consensus_4391#0      GCTCGTACCGGTGCGACTGCAAGGANGGCTTTAAGAATGGGCCGAACGAGATGATCTGCA 713
consensus_4391#2      GCTCGTACCGGTGCGACTGCAAGGAGGGCTTCAAGAATGGGCCGAACGAGATGATCTGCA 417
consensus_4391#1      GTTG--AGCGTAAAGGCTGTGATGCCGGCTTCAAGCACAATAAGCGCACGGACAAATGTG 528
                      * *   * **    * ***  * *  ***** *** *      *  *  *   *  **  

consensus_4391#0      CGGATGTGGACGAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATT 773
consensus_4391#2      CGGATGTGGACAAGTGCAAGGAGATCCCGGGGCTGTGCCATCAGCGCTGCCTGAACTATT 477
consensus_4391#1      AGGATGTGAACGAGTGCGAAACGGGCGAGGCCACCTGTAACCCGGACAGTCAGGTTTGTC 588
                       ******* ** ***** *   *  *  **     **  * * *  * * * *   * * 

consensus_4391#0      GGGGATCGTA-------------------------------------------------- 783
consensus_4391#2      GGGGATCGTACCGGTGCGGGTGCCATCCGGGCTACAGGATAAGCTACAACAATCGCACCT 537
consensus_4391#1      GAAACACACGCGGCAGCTTCCTGTGCGTTGATGTCGTCCTTCCGGACATTGCTTGC---- 644
                      *     *                                                     

consensus_4391#0      ------------------------------
consensus_4391#2      GCGACTATGTGGACGACTGTGAGGAGTACA 567
consensus_4391#1      ------------------------------