cluster # 4493

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 4493 cluster # 4493 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4493#0 length = 696 sequences # 1

consensus_4493#1 length = 683 sequences # 1
consensus_4493#2 length = 444 sequences # 1

consensusID : consensus_4493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 696
fasta sequence

                              [CCGCCAAGTTCTGGCGAAACGGGCGGTCGATATCTTTCGGTCAAGGTGTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTACAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCTGCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAACGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGTGGAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGATACTCTAACGTTGACCGTCATATCAGTCACACAGCAAGAGGCGGAACGTCTTGAACCGACGGAAGACCCTGGCGGATATTCATACATCGACTATTCGGAAAAACGTAGCC]

[+] EMBL BM606701             [CCGCCAAGTTCTGGCGAAACGGGCGGTCGATATCTTTCGGTCAAGGTGTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTACAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCTGCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAACGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGTGGAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGATACTCTAACGTTGACCGTCATATCAGTCACACAGCAAGAGGCGGAACGTCTTGAACCGACGGAAGACCCTGGCGGATATTCATACATCGACTATTCGGAAAAACGTAGCC]




>consensus_4493#0
CCGCCAAGTTCTGGCGAAACGGGCGGTCGATATCTTTCGGTCAAGGTGTTTCCAAGCTGG
AAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTT
TGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCG
TCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACA
ACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCGACGGTCAAG
AATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTACAAGACGGAAACC
GGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCTGCGATCAATCAAC
GGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAACGGGGCCGCGGAA
CAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGTGGAACGTGGAAGG
TGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGATACTCTAACGTTGA
CCGTCATATCAGTCACACAGCAAGAGGCGGAACGTCTTGAACCGACGGAAGACCCTGGCG
GATATTCATACATCGACTATTCGGAAAAACGTAGCC

consensusID : consensus_4493#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 683
fasta sequence

                              [CCGCGGGCGGTCGATATCTTTCGGTCAAGTAATGTTCTTTATCGGAACGAGCGAGGCTTAAGTGTTAATAGTGACCATTTGTTCGACATTTGTTTCCATTTGACTGTCTGCGTTAAGGGTGTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTACAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCTGCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAACGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGTGAAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGATACTCTAACGTTGACCGTCATATC]

[+] EMBL BM583644             [CCGCGGGCGGTCGATATCTTTCGGTCAAGTAATGTTCTTTATCGGAACGAGCGAGGCTTAAGTGTTAATAGTGACCATTTGTTCGACATTTGTTTCCATTTGACTGTCTGCGTTAAGGGTGTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTACAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCTGCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAACGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGTGAAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGATACTCTAACGTTGACCGTCATATC]




>consensus_4493#1
CCGCGGGCGGTCGATATCTTTCGGTCAAGTAATGTTCTTTATCGGAACGAGCGAGGCTTA
AGTGTTAATAGTGACCATTTGTTCGACATTTGTTTCCATTTGACTGTCTGCGTTAAGGGT
GTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGA
AAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTG
CCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAA
ATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTAC
CGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTA
CAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCT
GCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAA
CGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGT
GAAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGAT
ACTCTAACGTTGACCGTCATATC

consensusID : consensus_4493#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence

                              [CCGCCCACGCGTCCGCTTTCGGTCAAGTAATGTTATTTATCGGAACGAGCGAGGCTTAAGTGTTAATAGTGACCATTTGTTCGACATTTGTTCCCATTTGACTGTCTGCGTTAAGGGTGTTTCCAAGCTGGAAGGGAATTTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCCACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTAAAAGACGGAAACCGGTTTCGGGTTTA]

[+] EMBL BM611550             [CCGCCCACGCGTCCGCTTTCGGTCAAGTAATGTTATTTATCGGAACGAGCGAGGCTTAAGTGTTAATAGTGACCATTTGTTCGACATTTGTTCCCATTTGACTGTCTGCGTTAAGGGTGTTTCCAAGCTGGAAGGGAATTTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCGCCACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTAAAAGACGGAAACCGGTTTCGGGTTTA]




>consensus_4493#2
CCGCCCACGCGTCCGCTTTCGGTCAAGTAATGTTATTTATCGGAACGAGCGAGGCTTAAG
TGTTAATAGTGACCATTTGTTCGACATTTGTTCCCATTTGACTGTCTGCGTTAAGGGTGT
TTCCAAGCTGGAAGGGAATTTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGAAA
AGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTGCC
GTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAAAT
CTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTACCG
CCACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTAAA
AGACGGAAACCGGTTTCGGGTTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4493#1      CCGCGGGCGGTCGATATCTTTCGGTCAAGTAATGTTCTTTATCGGAACGAGCGAGGCTTA 60
consensus_4493#2      CCGCCCACG--CGTCCGCTTTCGGTCAAGTAATGTTATTTATCGGAACGAGCGAGGCTTA 58
consensus_4493#0      ------------------------------------------------------------
                                                                                  

consensus_4493#1      AGTGTTAATAGTGACCATTTGTTCGACATTTGTTTCCATTTGACTGTCTGCGTTAAGGGT 120
consensus_4493#2      AGTGTTAATAGTGACCATTTGTTCGACATTTGTTCCCATTTGACTGTCTGCGTTAAGGGT 118
consensus_4493#0      -----------CCGCCAAGTTCTGGCGAAACGG--GCGGTCGATATCTTTCGGTCAAGGT 47
                                    ***  *  * *  *   *    *  * **     * ** * * ***

consensus_4493#1      GTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGA 180
consensus_4493#2      GTTTCCAAGCTGGAAGGGAATTTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGA 178
consensus_4493#0      GTTTCCAAGCTGGAAGGGAATGTGTGTAAGCAGATAAATACAACGCAAGGGAAAATGTGA 107
                      ********************* **************************************

consensus_4493#1      AAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTG 240
consensus_4493#2      AAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTG 238
consensus_4493#0      AAAGTTGCTAGTTTGCTGAAACCCGTTTGTGAAGTGCTCGTGCCATTCCGCTGTACTGTG 167
                      ************************************************************

consensus_4493#1      CCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAA 300
consensus_4493#2      CCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAA 298
consensus_4493#0      CCGTAGTGCGTCGTCGAGAATACAAGAACAACTCGAAGGAATGGAAGCGAAAAATGGCAA 227
                      ************************************************************

consensus_4493#1      ATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTAC 360
consensus_4493#2      ATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTAC 358
consensus_4493#0      ATCTGGTCCTACAACCACAATCCCTGTCGCATCGTCGGGTGGTGGGGGGTGCAGTGTTAC 287
                      ************************************************************

consensus_4493#1      CGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTA 420
consensus_4493#2      CGCCACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTA 418
consensus_4493#0      CGCGACGGTCAAGAATGGGGTGAAGGAAAACCCGAACGGTCCCCGGGTGGTGACCATCTA 347
                      *** ********************************************************

consensus_4493#1      CAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCT 480
consensus_4493#2      AAAGACGGAAACCGGTTTCGGGTTTA---------------------------------- 444
consensus_4493#0      CAAGACGGAAACCGGTTTCGGGTTTAACGTCCGCGGACAAGTCAGCGAGGGTGGGCAGCT 407
                       *************************                                  

consensus_4493#1      GCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAA 540
consensus_4493#2      ------------------------------------------------------------
consensus_4493#0      GCGATCAATCAACGGCGAGCTGTATGCACCACTGCAACACGTCAGTGCTGTTTTGGATAA 467
                                                                                  

consensus_4493#1      CGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGT 600
consensus_4493#2      ------------------------------------------------------------
consensus_4493#0      CGGGGCCGCGGAACAGGCTGGCATTAAAAAGGGCGATCGAATCCTGGAAGTCAATCATGT 527
                                                                                  

consensus_4493#1      GAAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGAT 660
consensus_4493#2      ------------------------------------------------------------
consensus_4493#0      GGAACGTGGAAGGTGCTACTCACAAGCAAGGTGGTGGATCTCATCAAATCCGGTGGCGAT 587
                                                                                  

consensus_4493#1      ACTCTAACGTTGACCGTCATATC------------------------------------- 683
consensus_4493#2      ------------------------------------------------------------
consensus_4493#0      ACTCTAACGTTGACCGTCATATCAGTCACACAGCAAGAGGCGGAACGTCTTGAACCGACG 647
                                                                                  

consensus_4493#1      -------------------------------------------------
consensus_4493#2      -------------------------------------------------
consensus_4493#0      GAAGACCCTGGCGGATATTCATACATCGACTATTCGGAAAAACGTAGCC 696