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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4536#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1018 fasta sequence
[ATGTGGAGGATTCGGGCGTTAGCGCGGAACAGGAAATCAACGAACGAACGCCCATCCTCGGCAGCATTAACCGTGCACCACCGCAGCACGATGCGATCGGATTTTTCGGCGCGCTGCGCATACCCGGCGTGATCGAGTTCTCGCTCAGCCTGTTCTTCTCCAAGCTCGTCAGCTACACATTCCTTTTCTGGCTGCCGTTTTACATTCAACACTCTACTTCCATGGGCGCCAAGCTGTCGGCGGACGTATCGACGGTGTTCGATATCGGGGGCATTATTGGTGCAATTGCGGCCGGCATGCTGTCAGACGCATCCGCCATGCCGGCGACCACCTGCACGGGCATGCTGGCGATCGCTGCACCGCTGCTACTTATCTACCGGTGCTGGGGCAGCGTTTCGCTGTCCGTCAACATACTGCTCCTGTTCGTGGTCGGGCTGATGGTGAACGGACCGTACGCACTGATTACCACCTCGGTCAGCGCCGAGCTGGGGCAGCACAGCTCGCTAAATGGCAACTCGAAGGCACTCGCCACCGTCACCGCCATCATCGATGGGACGGGCTCGATCGGGGCGGCCATCGGGCCCCTGCTGGCAGGCATGGTGTCCGGCTGGAACAACGTGTTCTACATGCTCGTCATATCGGACGTGCTCGCGCTGGCCATGTTGCTGCGCATCAGCAGCAAGGAATGCTCCAGGCGCAACATCAACCGACGCTACAACGTGCGCATTGAGTGATAAGGGAAGGGGGTAGAGGAAGAAGGAAAGGAAGGAATTCGAATACGCGCACAAAGGTCGCGGTGGGTTTCGTGCGCGTGTGTACAGTTTTTACAGCTAGCTCTCGATATATACACAATATATGGTCTGATATTTTCGAGCACGAAACGCGGGGGAAAAGGGGGGAAAGAGGATACAGTGGGGTGGGTTTTGCTTTTTTTATCATTAATGTTTAGTGCGTTTTTTTTTTCGCCGCCTGCAGTCGATAAGTATAAATAAAAGCTCTTTAAAAACTGGGTGGTCTC]
[+] EMBL BX608832 [ATGTGGAGGATTCGGGCGTTAGCGCGGAACAGGAAATCAACGAACGAACGCCCATCCTCGGCAGCATTAACCGTGCACCACCGCAGCACGATGCGATCGGATTTTTCGGCGCGCTGCGCATACCCGGCGTGATCGAGTTCTCGCTCAGCCTGTTCTTCTCCAAGCTCGTCAGCTACACATTCCTTTTCTGGCTGCCGTTTTACATTCAACACTCTACTTCCATGGGCGCCAAGCTGTCGGCGGACGTATCGACGGTGTTCGATATCGGGGGCATTATTGGTGCAATTGCGGCCGGCATGCTGTCAGACGCATCCGCCATGCCGGCGACCACCTGCACGGGCATGCTGGCGATCGCTGCACCGCTGCTACTTATCTACCGGTGCTGGGGCAGCGTTTCGCTGTCCGTCAACATACTGCTCCTGTTCGTGGTCGGGCTGATGGTGAACGGACCGTACGCACTGATTACCACCTCGGTCAGCGCCGAGCTGGGGCAGCACAGCTCGCTAAATGGCAACTCGAAGGCACTCGCCACCGTCACCGCCATCATCGATGGGACGGGCTCGATCGGGGCGGCCATCGGGCCCCTGCTGGCAGGCATGGTGTCCGGCTG ]
[-] EMBL BX624039 [ TGATGGTGAACGGACNGTACGCACTGATTACCACNTCGGTCAGCGCNGAGCTGGGGCAGCACAGCTCGCTAAATGGCAACTCGAAGGCACTCGCCACCGTCACCGCCATCATCGATGGGACGGGCTCGATCGGGGCGGCCATCGGGCCCCTGCTGGCAGGCATGGTGTCCGGCTGGAACAACGTGTTCTACATGCTCGTCATATCGGACGTGCTCGCGCTGGCCATGTTGCTGCGCATCAGCAGCAAGGAATGCTCCAGGCGCAACATCAACCGACGCTACAACGTGCGCATTGAGTGATAAGGGAAGGGGGTAGAGGAAGAAGGAAAGGAAGGAATTCGAATACGCGCACAAAGGTCGCGGTGGGTTTCGTGCGCGTGTGTACAGTTTTTACAGCTAGCTCTCGATATATACACAATATATGGTCTGATATTTTCGAGCACGAAACGCGGGGGAAAAGGGGGGAAAGAGGATACAGTGGGGTGGGTTTTGCTTTTTTTATCATTAATGTTTAGTGCGTTTTTTTTTTCGCCGCCTGCAGTCGATAAGTATAAATAAAAGCTCTTTAAAAACTGGGTGGTCTC]
consensusID : consensus_4536#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 82 fasta sequence
[GATTCTTCGGCGCACTGCGCATTCCCGGCGTGATCGAGTTCTCGCTCAGCCTGTTCTTCTCCAAANTCNTCAGCTACACATT]
[+] EMBL BX623250 [GATTCTTCGGCGCACTGCGCATTCCCGGCGTGATCGAGTTCTCGCTCAGCCTGTTCTTCTCCAAANTCNTCAGCTACACATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4536#0 ATGTGGAGGATTCGGGCGTTAGCGCGGAACAGGAAATCAACGAACGAACGCCCATCCTCG 60
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 GCAGCATTAACCGTGCACCACCGCAGCACGATGCGATCGGATTTTTCGGCGCGCTGCGCA 120
consensus_4536#1 ---------------------------------------GATTCTTCGGCGCACTGCGCA 21
**** ******** *******
consensus_4536#0 TACCCGGCGTGATCGAGTTCTCGCTCAGCCTGTTCTTCTCCAAGCTCGTCAGCTACACAT 180
consensus_4536#1 TTCCCGGCGTGATCGAGTTCTCGCTCAGCCTGTTCTTCTCCAAANTCNTCAGCTACACAT 81
* ***************************************** ** ************
consensus_4536#0 TCCTTTTCTGGCTGCCGTTTTACATTCAACACTCTACTTCCATGGGCGCCAAGCTGTCGG 240
consensus_4536#1 T----------------------------------------------------------- 82
*
consensus_4536#0 CGGACGTATCGACGGTGTTCGATATCGGGGGCATTATTGGTGCAATTGCGGCCGGCATGC 300
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 TGTCAGACGCATCCGCCATGCCGGCGACCACCTGCACGGGCATGCTGGCGATCGCTGCAC 360
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 CGCTGCTACTTATCTACCGGTGCTGGGGCAGCGTTTCGCTGTCCGTCAACATACTGCTCC 420
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 TGTTCGTGGTCGGGCTGATGGTGAACGGACCGTACGCACTGATTACCACCTCGGTCAGCG 480
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 CCGAGCTGGGGCAGCACAGCTCGCTAAATGGCAACTCGAAGGCACTCGCCACCGTCACCG 540
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 CCATCATCGATGGGACGGGCTCGATCGGGGCGGCCATCGGGCCCCTGCTGGCAGGCATGG 600
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 TGTCCGGCTGGAACAACGTGTTCTACATGCTCGTCATATCGGACGTGCTCGCGCTGGCCA 660
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 TGTTGCTGCGCATCAGCAGCAAGGAATGCTCCAGGCGCAACATCAACCGACGCTACAACG 720
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 TGCGCATTGAGTGATAAGGGAAGGGGGTAGAGGAAGAAGGAAAGGAAGGAATTCGAATAC 780
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 GCGCACAAAGGTCGCGGTGGGTTTCGTGCGCGTGTGTACAGTTTTTACAGCTAGCTCTCG 840
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 ATATATACACAATATATGGTCTGATATTTTCGAGCACGAAACGCGGGGGAAAAGGGGGGA 900
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 AAGAGGATACAGTGGGGTGGGTTTTGCTTTTTTTATCATTAATGTTTAGTGCGTTTTTTT 960
consensus_4536#1 ------------------------------------------------------------
consensus_4536#0 TTTCGCCGCCTGCAGTCGATAAGTATAAATAAAAGCTCTTTAAAAACTGGGTGGTCTC 1018
consensus_4536#1 ----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||