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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1022 fasta sequence
[GACCCACGCGTCCGGGCCCCAGCGGTCAGTACCAGAACGGGAAGGAGTGCATCATCTGTCGTGCCTACAACCTCGACGAGCATCTATTTACCGAAAGTGCAACGCTCGAGCTTCTGCAGATTCGCTGGCATCCGGCATCTCCGACGGATTCACACTTGCTCGCTCTCCTGTCGGACAATTCGATAAGGGTGTACGATGTGGACTCGCTGCGGCATGTATGGCGCATTGGACCGACACCAACACCGCAACCCGTCGTCATCGGTAGTGGCAGCGGCGTTGGAGGCGGCAGTAAACACGGTTCTTCGGCCAGTTTTGTCGGATCGCCGGGAACGGCTGTCGCCTCGCCGGGAGTCACTTCGAAGCTTGCCTATCTTAACAGTCTGGGCGATACGGCTGTTGATTTTGACATCGCACCGCCACGTGTGGTTTCTTCCGCCACCGGTGGAAGTGGCTCCGTCGGCGCCGATACAACGTTCTCACCGACGACGACCCTGTCAACGACGTCGTCAACGGTCACCGCAACGAAGCCGGCCATTGCTCCAAAGGAAGGCACCCTCATGAATGACTCGGTAATCGCGCAGAAGAATAAAAAGGCACCACCGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATGGCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGACCCAAGCTGCAGGGACCGATTTCGATTCAGCCGCAGGTGGACGATAACTATGGGCTGGATTCGTGTTCGCTCATCGTCATCCCGACGCTGCCCCCGACAGTCATCATTGCCGAGAGCACGGGCAAAACGCATCATGCACTTTTCCTCGAGGAGTCCTGTTCCCTGGAGCGATCCCTCACGTCCGAGCAGCTGGCAGACAGCAATCTTACCCTGCACCCTTGCGAGTGGTACCTGCACGTGCTGGAAACGGTCGAGCTGGAGCTGGGGCTGCCGAGCGTGGAGGAAACGAAGGAGGCCAAGTCCTACTCCTGTCCGCTGCAT]
[+] EMBL BM647192 [GACCCACGCGTCCGGGCCCCAGCGGTCAGTACCAGAACGGGAAGGAGTGCATCATCTGTCGTGCCTACAACCTCGACGAGCATCTATTTACCGAAAGTGCAACGCTCGAGCTTCTGCAGATTCGCTGGCATCCGGCATCTCCGACGGATTCACACTTGCTCGCTCTCCTGTCGGACAATTCGATAAGGGTGTACGATGTGGACTCGCTGCGGCATGTATGGCGCATTGGACCGACACCAACACCGCAACCCGTCGTCATCGGTAGTGGCAGCGGCGTTGGAGGCGGCAGTAAACACGGTTCTTCGGCCAGTTTTGTCGGATCGCCGGGAACGGCTGTCGCCTCGCCGGGAGTCACTTCGAAGCTTGCCTATCTTAACAGTCTGGGCGATACGGCTGTTGATTTTGACATCGCACCGCCACGTGTGGTTTCTTCCGCCACCGGTGGAAGTGGCTCCGTCGGCGCCGATACAACGTTCTCACCGACGACGACCCTGTCAACGACGTCGTCAACGGTCACCGCAACGAAGCCGGCCATTGCTCCAAAGGAAGGCACCCTCATGAATGACTCGGTAATCGCGCAGAAGAATAAAAAGGCACCACCGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATGGCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGAC ]
[+] EMBL BM637964 [ ccgGCGCAGAAGAATAAAAAGGCACCACCGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATGGCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGACCCAAGCTGCAGGGACCGATTTCGATTCAGCCGCAGGTGGACGATAACTATGGGCTGGATTCGTGTTCGCTCATCGTCATCCCGACGCTGCCCCCGACAGTCATCATTGCCGAGAGCACGGGCAAAACGCATCATGCACTTTTCCTCGAGGAGTCCTGTTCCCTGGAGCGATCCCTCACGTCCGAGCAGCTGGCAGACAGCAATCTTACCCTGCACCCTTGCGAGTGGTACCTGCACGTGCTGGAAACGGTCGAGCTGGAGCTGGGGCTGCCGAGCGTGGAGGAAACGAAGGAGGCCAAGTCCTACTCCTGTCCGCTGCAT]
consensusID : consensus_4635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence
[CCGCGGACGCGTGGGCGAAGCTTGCCTATCTTAACAGTCTGGGCGATACGGCTGTTGATTTTGACATCGCACCGCCACGTGTGGTTTCTTCCGCCACCGGTGGAAGTGGCTCCGTCGGCGCCGATACAACGTTCTCACCGACGACGACCCTGTCAACGACGTCGTCAACGGTCACCGCAACGAAGCCGGCCATTGCTCCAAAGGAAGGCACCCTCATGAATGACTCGGTAATCGCGCAGAAGAATAAAAAGGCACCACCGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATGGCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGACCCAAGCTGCAGGGACCGATTTCGATTCAGCCGCAGGTGGACGATAACTATGGGCTGGATTCGTGTTCGCTCATCGTCATCCCGACGCTGCCACCGACAGTCATCATTGCCGAGAGCACGGGCAAAACGCATCATGCACTTTTCCTCGAGGAGTCCTGTCCCCTGGAGCGATCCCTCACGTCCGAGCAGCTGGCAGACAGCAATCTTACCCTGCACCCGTGCGAGTGGTACCTGCACGTGCTGGAAACGGTCGAGCTGGAGCTGGGGCTGCCGAGCGTGGAGGAAACGAAGGAGGCCAAGTCCTACTCCTGTCCG]
[+] EMBL BM643924 [CCGCGGACGCGTGGGCGAAGCTTGCCTATCTTAACAGTCTGGGCGATACGGCTGTTGATTTTGACATCGCACCGCCACGTGTGGTTTCTTCCGCCACCGGTGGAAGTGGCTCCGTCGGCGCCGATACAACGTTCTCACCGACGACGACCCTGTCAACGACGTCGTCAACGGTCACCGCAACGAAGCCGGCCATTGCTCCAAAGGAAGGCACCCTCATGAATGACTCGGTAATCGCGCAGAAGAATAAAAAGGCACCACCGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATGGCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGACCCAAGCTGCAGGGACCGATTTCGATTCAGCCGCAGGTGGACGATAACTATGGGCTGGATTCGTGTTCGCTCATCGTCATCCCGACGCTGCCACCGACAGTCATCATTGCCGAGAGCACGGGCAAAACGCATCATGCACTTTTCCTCGAGGAGTCCTGTCCCCTGGAGCGATCCCTCACGTCCGAGCAGCTGGCAGACAGCAATCTTACCCTGCACCCGTGCGAGTGGTACCTGCACGTGCTGGAAACGGTCGAGCTGGAGCTGGGGCTGCCGAGCGTGGAGGAAACGAAGGAGGCCAAGTCCTACTCCTGTCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4635#0 GACCCACGCGTCCGGGCCCCAGCGGTCAGTACCAGAACGGGAAGGAGTGCATCATCTGTC 60
consensus_4635#1 ------------------------------------------------------------
consensus_4635#0 GTGCCTACAACCTCGACGAGCATCTATTTACCGAAAGTGCAACGCTCGAGCTTCTGCAGA 120
consensus_4635#1 ------------------------------------------------------------
consensus_4635#0 TTCGCTGGCATCCGGCATCTCCGACGGATTCACACTTGCTCGCTCTCCTGTCGGACAATT 180
consensus_4635#1 ------------------------------------------------------------
consensus_4635#0 CGATAAGGGTGTACGATGTGGACTCGCTGCGGCATGTATGGCGCATTGGACCGACACCAA 240
consensus_4635#1 ------------------------------------------------------------
consensus_4635#0 CACCGCAACCCGTCGTCATCGGTAGTGGCAGCGGCGTTGGAGGCGGCAGTAAACACGGTT 300
consensus_4635#1 ------------------------------------------------------------
consensus_4635#0 CTTCGGCCAGTTTTGTCGGATCGCCGGGAACGGCTGTCGCCTCGCCGGGAGTCACTTCGA 360
consensus_4635#1 ------------------------------------------CCGCGGACGCGTGGGCGA 18
* *** * ***
consensus_4635#0 AGCTTGCCTATCTTAACAGTCTGGGCGATACGGCTGTTGATTTTGACATCGCACCGCCAC 420
consensus_4635#1 AGCTTGCCTATCTTAACAGTCTGGGCGATACGGCTGTTGATTTTGACATCGCACCGCCAC 78
************************************************************
consensus_4635#0 GTGTGGTTTCTTCCGCCACCGGTGGAAGTGGCTCCGTCGGCGCCGATACAACGTTCTCAC 480
consensus_4635#1 GTGTGGTTTCTTCCGCCACCGGTGGAAGTGGCTCCGTCGGCGCCGATACAACGTTCTCAC 138
************************************************************
consensus_4635#0 CGACGACGACCCTGTCAACGACGTCGTCAACGGTCACCGCAACGAAGCCGGCCATTGCTC 540
consensus_4635#1 CGACGACGACCCTGTCAACGACGTCGTCAACGGTCACCGCAACGAAGCCGGCCATTGCTC 198
************************************************************
consensus_4635#0 CAAAGGAAGGCACCCTCATGAATGACTCGGTAATCGCGCAGAAGAATAAAAAGGCACCAC 600
consensus_4635#1 CAAAGGAAGGCACCCTCATGAATGACTCGGTAATCGCGCAGAAGAATAAAAAGGCACCAC 258
************************************************************
consensus_4635#0 CGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATG 660
consensus_4635#1 CGACTGCCGGTGCCGGTGGGACCAAAGTGGAGTGGCCAATAGTGATTCTGCGGGGCGATG 318
************************************************************
consensus_4635#0 GCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGACCCAAGCTGCAGGGACCGA 720
consensus_4635#1 GCAATGTCTATGTACTTTGCGCCGGCATCGACACCAATCGACCCAAGCTGCAGGGACCGA 378
************************************************************
consensus_4635#0 TTTCGATTCAGCCGCAGGTGGACGATAACTATGGGCTGGATTCGTGTTCGCTCATCGTCA 780
consensus_4635#1 TTTCGATTCAGCCGCAGGTGGACGATAACTATGGGCTGGATTCGTGTTCGCTCATCGTCA 438
************************************************************
consensus_4635#0 TCCCGACGCTGCCCCCGACAGTCATCATTGCCGAGAGCACGGGCAAAACGCATCATGCAC 840
consensus_4635#1 TCCCGACGCTGCCACCGACAGTCATCATTGCCGAGAGCACGGGCAAAACGCATCATGCAC 498
************* **********************************************
consensus_4635#0 TTTTCCTCGAGGAGTCCTGTTCCCTGGAGCGATCCCTCACGTCCGAGCAGCTGGCAGACA 900
consensus_4635#1 TTTTCCTCGAGGAGTCCTGTCCCCTGGAGCGATCCCTCACGTCCGAGCAGCTGGCAGACA 558
******************** ***************************************
consensus_4635#0 GCAATCTTACCCTGCACCCTTGCGAGTGGTACCTGCACGTGCTGGAAACGGTCGAGCTGG 960
consensus_4635#1 GCAATCTTACCCTGCACCCGTGCGAGTGGTACCTGCACGTGCTGGAAACGGTCGAGCTGG 618
******************* ****************************************
consensus_4635#0 AGCTGGGGCTGCCGAGCGTGGAGGAAACGAAGGAGGCCAAGTCCTACTCCTGTCCGCTGC 1020
consensus_4635#1 AGCTGGGGCTGCCGAGCGTGGAGGAAACGAAGGAGGCCAAGTCCTACTCCTGTCCG---- 674
********************************************************
consensus_4635#0 AT 1022
consensus_4635#1 --
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||