cluster # 4637

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Anopheles gambiae
cluster # 4637 cluster # 4637 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4637#0 length = 672 sequences # 1

consensus_4637#1 length = 624 sequences # 1
consensus_4637#2 length = 578 sequences # 1

consensusID : consensus_4637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 672
fasta sequence

                              [CCGCGGACGCGTGGGCGGTTGCGGAAATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAATAATGAATTCTACGTCAAGGAGGCACGCGACATGGTGACGATCGTGAAACATCTCATCTCACTAGGACACAAATTTGAAGCAAACGAAATCATAAACCTTAATCTGGAGCCGGGCATATGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGTGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACATTGCCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGTAGCTCTTTGTTTATCACCGCAAGGACGCCGCAACGGCGAAGCATTGGTACGGTTCGTGTCACAGGAACATCGCGATATGGCGCTCAAGCGGCACAAGCATCACATTGGCAATCGGTACATCGAGGTGTATCGAGCCAACGGGGAGGACTTCCTGGCCGTGGCCGGTGGTGCATCCAACGAAGCGCAAGCCTTCCTGTCGAAGGGCGCACAGGTAATCATCCGGATGCGGGGATTACCCTACGATTGCACTGCCAAGCAGGTGCTTGATTTCTTTCGCCAACGGTGAGAACAGTTGCAACGTGCTGGACCGGTGCCGATGGCATCCTTTTTGTGAAGAAACCGGACGGTCGAGCGACCGGGGATGCGTT]

[+] EMBL BM611290             [CCGCGGACGCGTGGGCGGTTGCGGAAATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAATAATGAATTCTACGTCAAGGAGGCACGCGACATGGTGACGATCGTGAAACATCTCATCTCACTAGGACACAAATTTGAAGCAAACGAAATCATAAACCTTAATCTGGAGCCGGGCATATGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGTGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACATTGCCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGTAGCTCTTTGTTTATCACCGCAAGGACGCCGCAACGGCGAAGCATTGGTACGGTTCGTGTCACAGGAACATCGCGATATGGCGCTCAAGCGGCACAAGCATCACATTGGCAATCGGTACATCGAGGTGTATCGAGCCAACGGGGAGGACTTCCTGGCCGTGGCCGGTGGTGCATCCAACGAAGCGCAAGCCTTCCTGTCGAAGGGCGCACAGGTAATCATCCGGATGCGGGGATTACCCTACGATTGCACTGCCAAGCAGGTGCTTGATTTCTTTCGCCAACGGTGAGAACAGTTGCAACGTGCTGGACCGGTGCCGATGGCATCCTTTTTGTGAAGAAACCGGACGGTCGAGCGACCGGGGATGCGTT]




>consensus_4637#0
CCGCGGACGCGTGGGCGGTTGCGGAAATTATTAAAGATCTGGACCTGCCAGCCTGTCAGG
ATAATAATGAATTCTACGTCAAGGAGGCACGCGACATGGTGACGATCGTGAAACATCTCA
TCTCACTAGGACACAAATTTGAAGCAAACGAAATCATAAACCTTAATCTGGAGCCGGGCA
TATGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGTGCACGTGGACTGCCGT
GGCAGAGCAGCGATCAGGACATTGCCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTG
GTGTAGCTCTTTGTTTATCACCGCAAGGACGCCGCAACGGCGAAGCATTGGTACGGTTCG
TGTCACAGGAACATCGCGATATGGCGCTCAAGCGGCACAAGCATCACATTGGCAATCGGT
ACATCGAGGTGTATCGAGCCAACGGGGAGGACTTCCTGGCCGTGGCCGGTGGTGCATCCA
ACGAAGCGCAAGCCTTCCTGTCGAAGGGCGCACAGGTAATCATCCGGATGCGGGGATTAC
CCTACGATTGCACTGCCAAGCAGGTGCTTGATTTCTTTCGCCAACGGTGAGAACAGTTGC
AACGTGCTGGACCGGTGCCGATGGCATCCTTTTTGTGAAGAAACCGGACGGTCGAGCGAC
CGGGGATGCGTT

consensusID : consensus_4637#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 624
fasta sequence

                              [CCGCGGACGCGTGGGCGACCGAGCATAAGGAGCGCGCGCGTGTGGCCACAGTGTGTGTGTTTTTTTTTGCCGCGATCCGCATGTTGTCGGTGCAAAACGTTTTGTGCTTGATCCTTCGTAACGGTTCAGCCGCGAACGTATCCTGCCGTAGTGTTGTGACTTGAACCTAGGTTCTAATCTGCTATAAATAGAGTGTACAAAAGAGTGTGCCTGTGTTGGTGTGGTCTACCGGCGGCCTGATAAGAGATTAAACCCTCCCGACAGCAATCAATCGCTGTGTGCTGTGTTCTGGTGTTTGTTAGTGTGACTTGGGGTCTTAAAAAAATGTGCTAGAAGTTTGAAAATACGGGTCGACTCTGCAACATACAAAGAAGGGGAAAATCAATTACACCTGCGTGTGCTACTGCTGCTCCTATCGAACTGGAACGGGATTACGCGGGCATCGATAGGGGATGCGATTGCACCAACACACTGGCAGCGAATCACCCTGTATTAGCCATCTTTATTGGCTGTAAAGCTTGGTGCGCTGTGCCGTGTTTGTGATAAGCAGAACCCCCTGGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGCGCACGTGGACTGCCGTGGCAGAGC]

[+] EMBL BM594132             [CCGCGGACGCGTGGGCGACCGAGCATAAGGAGCGCGCGCGTGTGGCCACAGTGTGTGTGTTTTTTTTTGCCGCGATCCGCATGTTGTCGGTGCAAAACGTTTTGTGCTTGATCCTTCGTAACGGTTCAGCCGCGAACGTATCCTGCCGTAGTGTTGTGACTTGAACCTAGGTTCTAATCTGCTATAAATAGAGTGTACAAAAGAGTGTGCCTGTGTTGGTGTGGTCTACCGGCGGCCTGATAAGAGATTAAACCCTCCCGACAGCAATCAATCGCTGTGTGCTGTGTTCTGGTGTTTGTTAGTGTGACTTGGGGTCTTAAAAAAATGTGCTAGAAGTTTGAAAATACGGGTCGACTCTGCAACATACAAAGAAGGGGAAAATCAATTACACCTGCGTGTGCTACTGCTGCTCCTATCGAACTGGAACGGGATTACGCGGGCATCGATAGGGGATGCGATTGCACCAACACACTGGCAGCGAATCACCCTGTATTAGCCATCTTTATTGGCTGTAAAGCTTGGTGCGCTGTGCCGTGTTTGTGATAAGCAGAACCCCCTGGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGCGCACGTGGACTGCCGTGGCAGAGC]




>consensus_4637#1
CCGCGGACGCGTGGGCGACCGAGCATAAGGAGCGCGCGCGTGTGGCCACAGTGTGTGTGT
TTTTTTTTGCCGCGATCCGCATGTTGTCGGTGCAAAACGTTTTGTGCTTGATCCTTCGTA
ACGGTTCAGCCGCGAACGTATCCTGCCGTAGTGTTGTGACTTGAACCTAGGTTCTAATCT
GCTATAAATAGAGTGTACAAAAGAGTGTGCCTGTGTTGGTGTGGTCTACCGGCGGCCTGA
TAAGAGATTAAACCCTCCCGACAGCAATCAATCGCTGTGTGCTGTGTTCTGGTGTTTGTT
AGTGTGACTTGGGGTCTTAAAAAAATGTGCTAGAAGTTTGAAAATACGGGTCGACTCTGC
AACATACAAAGAAGGGGAAAATCAATTACACCTGCGTGTGCTACTGCTGCTCCTATCGAA
CTGGAACGGGATTACGCGGGCATCGATAGGGGATGCGATTGCACCAACACACTGGCAGCG
AATCACCCTGTATTAGCCATCTTTATTGGCTGTAAAGCTTGGTGCGCTGTGCCGTGTTTG
TGATAAGCAGAACCCCCTGGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGC
GCACGTGGACTGCCGTGGCAGAGC

consensusID : consensus_4637#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 578
fasta sequence

                              [CCGCGGCAAAAGCTCCAGTCGATGCCGAGTCTGCCGCCAACGCCGGCCTCGGTTGCGGAAATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAACAATGAATTCTATGTCAAGGAGGCACGCGACATGGTGACGATCGTGAAACATCTCATCTCACTAGGACACAAATTTGAAGCAAACGAAATCATAAACCTTAATCTGGAGCCGGGCATATGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGCGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACATTGCCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGCTGCTGCTGCTGCTGCCCTGTCGTCCTCGGTGACGGGTGCCGCCAGTGCCGGTGGGCTGGCTGCCTTCGGGCACAGTCCTGCCACCGCGGCAGGGTTAGCAGCGGCCGGGCTGGGCGCTACTTCGGCAGCGTCCGGTGCCGCGGAGCCTGGCCGGCGGTTTGCCGCCCCATCTGGCCGCCGCTCATCCGGGCGCCCAGTACGCACCGCTCTACTTTATGCACCGCCACGCCGCCATGCTCG]

[+] EMBL BM588680             [CCGCGGCAAAAGCTCCAGTCGATGCCGAGTCTGCCGCCAACGCCGGCCTCGGTTGCGGAAATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAACAATGAATTCTATGTCAAGGAGGCACGCGACATGGTGACGATCGTGAAACATCTCATCTCACTAGGACACAAATTTGAAGCAAACGAAATCATAAACCTTAATCTGGAGCCGGGCATATGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGCGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACATTGCCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGCTGCTGCTGCTGCTGCCCTGTCGTCCTCGGTGACGGGTGCCGCCAGTGCCGGTGGGCTGGCTGCCTTCGGGCACAGTCCTGCCACCGCGGCAGGGTTAGCAGCGGCCGGGCTGGGCGCTACTTCGGCAGCGTCCGGTGCCGCGGAGCCTGGCCGGCGGTTTGCCGCCCCATCTGGCCGCCGCTCATCCGGGCGCCCAGTACGCACCGCTCTACTTTATGCACCGCCACGCCGCCATGCTCG]




>consensus_4637#2
CCGCGGCAAAAGCTCCAGTCGATGCCGAGTCTGCCGCCAACGCCGGCCTCGGTTGCGGAA
ATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAACAATGAATTCTATGTCAAGGAG
GCACGCGACATGGTGACGATCGTGAAACATCTCATCTCACTAGGACACAAATTTGAAGCA
AACGAAATCATAAACCTTAATCTGGAGCCGGGCATATGCTCGATTGATGACGAAATCGAT
GGAACGTGTATAGTGCGCGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACATTGCC
AAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGCTGCTGCTGCTGCTGCCCTGTCG
TCCTCGGTGACGGGTGCCGCCAGTGCCGGTGGGCTGGCTGCCTTCGGGCACAGTCCTGCC
ACCGCGGCAGGGTTAGCAGCGGCCGGGCTGGGCGCTACTTCGGCAGCGTCCGGTGCCGCG
GAGCCTGGCCGGCGGTTTGCCGCCCCATCTGGCCGCCGCTCATCCGGGCGCCCAGTACGC
ACCGCTCTACTTTATGCACCGCCACGCCGCCATGCTCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4637#0      ---------------------------------CCGCGGACGCGTGGG-CGGTTGCGGAA 26
consensus_4637#2      CCGCGGCAAAAGCTCCAGTCGATGCCGAGTCTGCCGCCAACGCCGGCCTCGGTTGCGGAA 60
consensus_4637#1      ----------------------------------------------CCGCGGACGCGTGG 14
                                                                       ***  ***   

consensus_4637#0      ATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAATA-ATGAATTCTACGTCAAGGA 85
consensus_4637#2      ATTATTAAAGATCTGGACCTGCCAGCCTGTCAGGATAACA-ATGAATTCTATGTCAAGGA 119
consensus_4637#1      GCGACCGAGCATAAGGAGC-GCGCGCGTGTGGCCACAGTGTGTGTGTTTTTTTTTGCCGC 73
                         *   *  **  *** * **  ** ***    * *     **  ** *   *    * 

consensus_4637#0      GGCACGCGACATGGTGACGATCGTGAAACATCTCAT-CTCACTAGGACACAAATTTGAAG 144
consensus_4637#2      GGCACGCGACATGGTGACGATCGTGAAACATCTCAT-CTCACTAGGACACAAATTTGAAG 178
consensus_4637#1      GATCCGC---ATGTTGTCGGT-GCAAAACGTTTTGTGCTTGATCCTTCGTAACGGTTCAG 129
                      *   ***   *** ** ** * *  **** * *  * **   *    *  **   *  **

consensus_4637#0      CAAACGAAATCATAAACCTTAATCTGGAGCC--GGGCATATGCTCGATTGATGACGAAAT 202
consensus_4637#2      CAAACGAAATCATAAACCTTAATCTGGAGCC--GGGCATATGCTCGATTGATGACGAAAT 236
consensus_4637#1      CCGCGAACGTATCCTGCCGTAGTGTTGTGACTTGAACCTAGGTTCTAATC----TGCTAT 185
                      *     *  *      ** ** * * * * *  *  * ** * ** * *      *  **

consensus_4637#0      CGATGGAACGTGTATAGTGCGTGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACAT 262
consensus_4637#2      CGATGGAACGTGTATAGTGCGCGCACGTGGACTGCCGTGGCAGAGCAGCGATCAGGACAT 296
consensus_4637#1      AAATAGAGTGTACAAAA-GAGTGTGCCTGTGTTGGTGTGGTCTACCGGCGGCCTGATAAG 244
                        ** **  **  * *  * * *  * **   **  ****   * * ***  * *   * 

consensus_4637#0      TG-CCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGTAGCTCTTTGTTTATCAC 321
consensus_4637#2      TG-CCAAGTTCTTCCGTGGACTGAATGTGGCCAAGGGTGGTGCTGCTG-----CTGCTGC 350
consensus_4637#1      AGATTAAACCCTCCCGACAGCAATCAATCGCTGTGTGCTGTGTTCTGGT--GTTTGTTAG 302
                       *   **   ** ***    *      * **   * *  ***            *     

consensus_4637#0      CGCAAGGACGCCGCAACGGCGAAGCATTGGTACGGTTCGTGTCACAGGAACATC-GCGAT 380
consensus_4637#2      TGCCCTGTCGTCCT--CGGTGACG----GGTGCCGCCAGTGCCGGTGGGCTGGCTGCCTT 404
consensus_4637#1      TGTGAC-TTGGGGTCTTAAAAAAATGTGCTAGAAGTTTGAAAATACGGGTCGACTCTGCA 361
                       *       *           *            *   *       **     *      

consensus_4637#0      ATG-GCGCTCAAGCGGCACAAGCATCACATTGGCAATCGGTACATCGAGGTGTATCGAGC 439
consensus_4637#2      CGG-GCACAGTCCTGCCACCGCGGCAGGGTTAGCAGCGGCCGGGCTGGGCGCTACTTCGG 463
consensus_4637#1      ACATACAAAGAAGGGGAAAATCAATTACACCTGCGTGTGCTACTGCTGCTCCTATCGAAC 421
                           *        *  *              **    *             **      

consensus_4637#0      CAACGGGGAGGACTTCCTGGCCGTGGCCGGTGGTGCA-TCCAACGAAGCGCAAGCCTTCC 498
consensus_4637#2      CAGCGTCCGGTGCCGCGGAGCC-TGGCCGGCGGTTTG-CCGCCCCATCTGGCCGCCGCTC 521
consensus_4637#1      TGGAACGGGATTACGCG-GGCATCGATAGGGGATGCGATTGCACCAACACACTGGCAGCG 480
                                     *   **   *   ** * *         * *       * *    

consensus_4637#0      TGTCGAAGGGCGCACAGGTAATCATCCGGATGCGGGGATTACCCTACGATTGCACTGCCA 558
consensus_4637#2      ATCCG---GGCGCCCAG-TACGCACCGCTCTAC-----TTTATGCACCGCCACGCCGCCA 572
consensus_4637#1      AATCACCCTGTATTAGCCATCTTTATTGGCTGTAAAGCTTGGTGCGCTGTGCCGTGTTTG 540
                         *     *                    *       **      *     *       

consensus_4637#0      AGCAGGTGCTTGATTTCTTTCGCCAACGGTGA--GAACAGTTGCAACGTGCTGGACCGGT 616
consensus_4637#2      TGCTCG------------------------------------------------------ 578
consensus_4637#1      TGATAAGCAGAACCCCCTGGCTCGATTGATGACGAAATCGATGGAACGTGTATAGTGCGC 600
                       *                                                          

consensus_4637#0      GCCGATGGCATCCTTTTTGTGAAGAAACCGGACGGTCGAGCGACCGGGGATGCGTT 672
consensus_4637#2      --------------------------------------------------------
consensus_4637#1      GCACGTGGACTGCCGTGGCAGAGC-------------------------------- 624