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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 697 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGGGTAGATCACATTTTACACTTTCACTTTTAAATTATCATCCCATTAATAATCGGGGAAAAGGTAAGCGCATTTAAATTATGAGTGAAATAGCACCGGACAGTGCCGATGTCGCAGCTCCCACCGTAGAGAAGAAAAGCCACCGGGTACAGGTGCGTGTACCACCGCCGGAGTTTTCCAGTCAAACGGAGCTACACCCTGGCAAAAGTCCAGGAGTGAGGGAAAGCTTGCAGCCGAACGTTTGCGAACCGCAACAGGTTGGCATCTTAAGGGGAGCAGCAGCGTACACTAAATCATACCACAACAGTGATGATATCTTGAAACATCTCGCCGTTGCATATCTGTTCACCATCCTGAGGTCACCCCCGAAATGGTCACCAGAAACGTTCTCCGAAATAGTGGCCCAGGAGTCGTCGATCGCCAAAGCCCCACTGGAAACCAAGCTCCCAATCTGTCGAAACGACAAAACGTACAACATTCATCTCTCGAGCACGCTCGTAAAGGGACGCTTCGTAACACCGCAGGACCGGTCGGATCACGTTCACCTAAGCATCCATCAGGCACTATCGCGCATCAAGCGCGGAAAGGCAGCCGTGTGGGAAGTGTGACGGACACTTCTTCCTCATACGCCGTCTCTTAACCGGCTGGTACTTCTACACCCCGAGCCTGC]
[+] EMBL BM623279 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGGTAGATCACATTTTACACTTTCACTTTTAAATTATCATCCCATTAATAATCGGGGAAAAGGTAAGCGCATTTAAATTATGAGTGAAATAGCACCGGACAGTGCCGATGTCGCAGCTCCCACCGTAGAGAAGAAAAGCCACCGGGTACAGGTGCGTGTACCACCGCCGGAGTTTTCCAGTCAAACGGAGCTACACCCTGGCAAAAGTCCAGGAGTGAGGGAAAGCTTGCAGCCGAACGTTTGCGAACCGCAACAGGTTGGCATCTTAAGGGGAGCAGCAGCGTACACTAAATCATACCACAACAGTGATGATATCTTGAAACATCTCGCCGTTGCATATCTGTTCACCATCCTGAGGTCACCCCCGAAATGGTCACCAGAAACGTTCTCCGAAATAGTGGCCCAGGAGTCGTCGATCGCCAAAGCCCCACTGGAAACCAAGCTCCCAATCTGTCGAAACGACAAAACGTACAACATTCATCTCTCGAGCACGCTCGTAAAGGGACGCTTCGTAACACCGCAGGACCGGTCGGATCACGTTCACCTAAGCATCCATCAGGCACTATCGCGCATCAAGCGCGGAAAGGCAGCCGTGTGGGAAGTGTGACGGACACTTCTTCCTCATACGCCGTCTCTTAACCGGCTGGTACTTCTACACCCCGAGCCTGC]
consensusID : consensus_471#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[CCGCCCACGCGTCCGAATTGTTCTGTGTAGTAAATTACGGGTAGATCACATTTCATACCTTCACTTCTAAATTATCATCCCTTTAATAATCGGGGAAAAAGTAAGCGCATTTAAATTATGAGTGAAATAGCACCGGACAGTGCCGATGTCGCAGCTCCCACCGTAGAGAAGAAAAGCCACCGGGTACAGGTGCGTGTACCACCGCCGGAGTTTTCCAGTCAAACGGAGCTACACCCTGGCAAAAGTCCAGGAGTGAGGGAAAGCTTGCAGCCGAACGTTTGCGAACCGCAACAGGTTGGCATCTTAAGGGGAGCAGCAGCGTACACTAAATCATACCGCAACAGTGATGATATCCTTAAACATCTCGCCGTTGTTTATCTGTTCACCATCCTGAAGTCACCCCCGAAATGGTCACCAGAAACGTTCTCCGAAATAGTGGCCCAGGAGTCGTCGATCGCCAAAGCCCCACTGGAAACCAAGCTCCCAATCCGTCGAAACGACAAAACGTACAACATTCATCTCTCGAGCACGCTCGTAAAGGGACGCTTCGTAACACCGCAGGACCGGTCGGACCATGTTCATCTAAGCATCCATCAGGCACTATCCCGCATTAAGCGCGGAAAGGCAGCCCGTGTGG]
[+] EMBL BM652432 [CCGCCCACGCGTCCGAATTGTTCTGTGTAGTAAATTACGGGTAGATCACATTTCATACCTTCACTTCTAAATTATCATCCCTTTAATAATCGGGGAAAAAGTAAGCGCATTTAAATTATGAGTGAAATAGCACCGGACAGTGCCGATGTCGCAGCTCCCACCGTAGAGAAGAAAAGCCACCGGGTACAGGTGCGTGTACCACCGCCGGAGTTTTCCAGTCAAACGGAGCTACACCCTGGCAAAAGTCCAGGAGTGAGGGAAAGCTTGCAGCCGAACGTTTGCGAACCGCAACAGGTTGGCATCTTAAGGGGAGCAGCAGCGTACACTAAATCATACCGCAACAGTGATGATATCCTTAAACATCTCGCCGTTGTTTATCTGTTCACCATCCTGAAGTCACCCCCGAAATGGTCACCAGAAACGTTCTCCGAAATAGTGGCCCAGGAGTCGTCGATCGCCAAAGCCCCACTGGAAACCAAGCTCCCAATCCGTCGAAACGACAAAACGTACAACATTCATCTCTCGAGCACGCTCGTAAAGGGACGCTTCGTAACACCGCAGGACCGGTCGGACCATGTTCATCTAAGCATCCATCAGGCACTATCCCGCATTAAGCGCGGAAAGGCAGCCCGTGTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_471#0 CCGCGGACGCGT--GGGCGGACGCGTGGG--------CGGGTAGATCACATTTTACACTT 50
consensus_471#1 CCGCCCACGCGTCCGAATTGTTCTGTGTAGTAAATTACGGGTAGATCACATTTCATACCT 60
**** ****** * * *** **************** * ** *
consensus_471#0 TCACTTTTAAATTATCATCCCATTAATAATCGGGGAAAAGGTAAGCGCATTTAAATTATG 110
consensus_471#1 TCACTTCTAAATTATCATCCCTTTAATAATCGGGGAAAAAGTAAGCGCATTTAAATTATG 120
****** ************** ***************** ********************
consensus_471#0 AGTGAAATAGCACCGGACAGTGCCGATGTCGCAGCTCCCACCGTAGAGAAGAAAAGCCAC 170
consensus_471#1 AGTGAAATAGCACCGGACAGTGCCGATGTCGCAGCTCCCACCGTAGAGAAGAAAAGCCAC 180
************************************************************
consensus_471#0 CGGGTACAGGTGCGTGTACCACCGCCGGAGTTTTCCAGTCAAACGGAGCTACACCCTGGC 230
consensus_471#1 CGGGTACAGGTGCGTGTACCACCGCCGGAGTTTTCCAGTCAAACGGAGCTACACCCTGGC 240
************************************************************
consensus_471#0 AAAAGTCCAGGAGTGAGGGAAAGCTTGCAGCCGAACGTTTGCGAACCGCAACAGGTTGGC 290
consensus_471#1 AAAAGTCCAGGAGTGAGGGAAAGCTTGCAGCCGAACGTTTGCGAACCGCAACAGGTTGGC 300
************************************************************
consensus_471#0 ATCTTAAGGGGAGCAGCAGCGTACACTAAATCATACCACAACAGTGATGATATCTTGAAA 350
consensus_471#1 ATCTTAAGGGGAGCAGCAGCGTACACTAAATCATACCGCAACAGTGATGATATCCTTAAA 360
************************************* **************** * ***
consensus_471#0 CATCTCGCCGTTGCATATCTGTTCACCATCCTGAGGTCACCCCCGAAATGGTCACCAGAA 410
consensus_471#1 CATCTCGCCGTTGTTTATCTGTTCACCATCCTGAAGTCACCCCCGAAATGGTCACCAGAA 420
************* ******************* *************************
consensus_471#0 ACGTTCTCCGAAATAGTGGCCCAGGAGTCGTCGATCGCCAAAGCCCCACTGGAAACCAAG 470
consensus_471#1 ACGTTCTCCGAAATAGTGGCCCAGGAGTCGTCGATCGCCAAAGCCCCACTGGAAACCAAG 480
************************************************************
consensus_471#0 CTCCCAATCTGTCGAAACGACAAAACGTACAACATTCATCTCTCGAGCACGCTCGTAAAG 530
consensus_471#1 CTCCCAATCCGTCGAAACGACAAAACGTACAACATTCATCTCTCGAGCACGCTCGTAAAG 540
********* **************************************************
consensus_471#0 GGACGCTTCGTAACACCGCAGGACCGGTCGGATCACGTTCACCTAAGCATCCATCAGGCA 590
consensus_471#1 GGACGCTTCGTAACACCGCAGGACCGGTCGGACCATGTTCATCTAAGCATCCATCAGGCA 600
******************************** ** ***** ******************
consensus_471#0 CTATCGCGCATCAAGCGCGGAAAGGCAGCC-GTGTGGGAAGTGTGACGGACACTTCTTCC 649
consensus_471#1 CTATCCCGCATTAAGCGCGGAAAGGCAGCCCGTGTGG----------------------- 637
***** ***** ****************** ******
consensus_471#0 TCATACGCCGTCTCTTAACCGGCTGGTACTTCTACACCCCGAGCCTGC 697
consensus_471#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||