cluster # 4771

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Anopheles gambiae
cluster # 4771 cluster # 4771 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4771#0 length = 777 sequences # 2

consensus_4771#1 length = 722 sequences # 1

consensusID : consensus_4771#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 777
fasta sequence

                              [ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAGTGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGGAGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAGTGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAGTCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAATAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC]

[+] EMBL BX629267             [ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAGTGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGGAGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAGTGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAGTCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAATAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC]
[+] EMBL BX629160             [      GCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAGTGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGGAGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAGTGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAGTCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAATAACCCGTACTCGCCCGATGTGCTCCAGCGT                          ]




>consensus_4771#0
ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAG
TGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGG
AGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAG
TGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAG
TCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAG
TCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGA
TCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAA
CCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGAT
GCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGG
TGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACC
GGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCAT
ACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAA
TAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC

consensusID : consensus_4771#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 722
fasta sequence

                              [CCGCGGACGCGTGGGGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTTGCACAGAACGGAGCTAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCGACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAAACAGGGGACAATCGTTCCGCCGCCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGAAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCTTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGTAATGCCAAACCGATCGCCAACAACCCGTACTCGCCCGATGTGCTCCAGCGTCGGCTGTCGGAAAAGACACGCCCGTCCAGCATGATCGAGATTGATCGGTTGGTGCGAAAGGAGGCGGCCCCAGCCACCGGAGGAGCCGCCGGCGGTGTGCTGATCGACGATGAGGAACCACCCAAAGAGCCGACGGATTCGGGGACGGAGAACGATCGCTCGTTACAGTCGGTGACGGGTGGCGTACTGACAGAAACGAAGAAGATCGGTCGCGAGTACTACATCAACGATCCAGAGCGTC]

[+] EMBL BM588509             [CCGCGGACGCGTGGGGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTTGCACAGAACGGAGCTAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCGACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAAACAGGGGACAATCGTTCCGCCGCCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGAAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCTTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGTAATGCCAAACCGATCGCCAACAACCCGTACTCGCCCGATGTGCTCCAGCGTCGGCTGTCGGAAAAGACACGCCCGTCCAGCATGATCGAGATTGATCGGTTGGTGCGAAAGGAGGCGGCCCCAGCCACCGGAGGAGCCGCCGGCGGTGTGCTGATCGACGATGAGGAACCACCCAAAGAGCCGACGGATTCGGGGACGGAGAACGATCGCTCGTTACAGTCGGTGACGGGTGGCGTACTGACAGAAACGAAGAAGATCGGTCGCGAGTACTACATCAACGATCCAGAGCGTC]




>consensus_4771#1
CCGCGGACGCGTGGGGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTTGCACA
GAACGGAGCTAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGA
CAGGGTGGAAACGACCAATCCGACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGC
AAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAAACAGGGGACAA
TCGTTCCGCCGCCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGC
ACAAATAGCAACCAATGAAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGA
CGCGTCCTTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCT
GAAGTGGCGTAATGCCAAACCGATCGCCAACAACCCGTACTCGCCCGATGTGCTCCAGCG
TCGGCTGTCGGAAAAGACACGCCCGTCCAGCATGATCGAGATTGATCGGTTGGTGCGAAA
GGAGGCGGCCCCAGCCACCGGAGGAGCCGCCGGCGGTGTGCTGATCGACGATGAGGAACC
ACCCAAAGAGCCGACGGATTCGGGGACGGAGAACGATCGCTCGTTACAGTCGGTGACGGG
TGGCGTACTGACAGAAACGAAGAAGATCGGTCGCGAGTACTACATCAACGATCCAGAGCG
TC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4771#0      ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAG 60
consensus_4771#1      ------------------------------------------------------------
                                                                                  

consensus_4771#0      TGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGG 120
consensus_4771#1      ------------------------------------------------------------
                                                                                  

consensus_4771#0      AGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAG 180
consensus_4771#1      ------------------------------------------------------------
                                                                                  

consensus_4771#0      TGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAG 240
consensus_4771#1      ------------------------------------------------------------
                                                                                  

consensus_4771#0      TCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAG 300
consensus_4771#1      ---------------------------CCGCGGACGCGTGGGGTCGGAAGCTACCAACAG 33
                                                 *   *     *    ******************

consensus_4771#0      TCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGA 360
consensus_4771#1      TCAGCTGCTGGCCGATCAGGTTGCACAGAACGGAGCTAGTGAACGTCTGCAGGTGGACGA 93
                      ********************* ************** ***********************

consensus_4771#0      TCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAA 420
consensus_4771#1      TCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCGACCCTGACCAA 153
                      ************************************************ ***********

consensus_4771#0      CCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGAT 480
consensus_4771#1      CCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGAT 213
                      ************************************************************

consensus_4771#0      GCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGG 540
consensus_4771#1      GCTGCAGCGTACCGAAACAGGGGACAATC---GTTCCGCCGCCGAATCCAACGGTTACGG 270
                      *************** *************   ******** *******************

consensus_4771#0      TGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACC 600
consensus_4771#1      TGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGAAGGCGATGTACC 330
                      *********************************************** ************

consensus_4771#0      GGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCAT 660
consensus_4771#1      GGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCTTGGATGCACCGGACACGCTCAT 390
                      ************************************* **********************

consensus_4771#0      ACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAA 720
consensus_4771#1      ACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGTAATGCCAAACCGATCGCCAA 450
                      *************************************** ********************

consensus_4771#0      TAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC--- 777
consensus_4771#1      CAACCCGTACTCGCCCGATGTGCTCCAGCGTCGGCTGTCGGAAAAGACACGCCCGTCCAG 510
                       ******************************* ************************   

consensus_4771#0      ------------------------------------------------------------
consensus_4771#1      CATGATCGAGATTGATCGGTTGGTGCGAAAGGAGGCGGCCCCAGCCACCGGAGGAGCCGC 570
                                                                                  

consensus_4771#0      ------------------------------------------------------------
consensus_4771#1      CGGCGGTGTGCTGATCGACGATGAGGAACCACCCAAAGAGCCGACGGATTCGGGGACGGA 630
                                                                                  

consensus_4771#0      ------------------------------------------------------------
consensus_4771#1      GAACGATCGCTCGTTACAGTCGGTGACGGGTGGCGTACTGACAGAAACGAAGAAGATCGG 690
                                                                                  

consensus_4771#0      --------------------------------
consensus_4771#1      TCGCGAGTACTACATCAACGATCCAGAGCGTC 722