cluster # 4863

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Anopheles gambiae
cluster # 4863 cluster # 4863 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4863#0 length = 971 sequences # 1

consensus_4863#1 length = 676 sequences # 3

consensusID : consensus_4863#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 971
fasta sequence

                              [CGGTAGAACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCCCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACACCGCCAACTACATGCGCACGCTGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGCCCACGCCTCCATCCGCAAGGATCCCTCCTTCACGAAGAAACCCGAGAAGAAGGTCACCAAGAAGCGGTGGACGATGGCCAAGTTGCCGCTCGCCGCCCGCAAGGAGAAGATCGCGAAGACCAAGGCCGACTTCCTGGCCAAGATCCAGGCCGACGTCGAAGCCTAAGCGGGCTGCCCCGTCGCCGTCGACCGTTCTTCTTCTCTTCGTGGTGGTGTATCATCCTTGTTCTGCCCTGTTCTTCGCCTGTGCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTCTACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTGTGTTTTTGGCGCGATCGGTGTCGTTTAACTGTTAGAGGTGGTAGTAGTGTGCGAGTTTGTGGTGTGCCGCAATGGGAAGGTTCCT]

[+] EMBL CNS09J38             [CGGTAGAACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCCCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACACCGCCAACTACATGCGCACGCTGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGCCCACGCCTCCATCCGCAAGGATCCCTCCTTCACGAAGAAACCCGAGAAGAAGGTCACCAAGAAGCGGTGGACGATGGCCAAGTTGCCGCTCGCCGCCCGCAAGGAGAAGATCGCGAAGACCAAGGCCGACTTCCTGGCCAAGATCCAGGCCGACGTCGAAGCCTAAGCGGGCTGCCCCGTCGCCGTCGACCGTTCTTCTTCTCTTCGTGGTGGTGTATCATCCTTGTTCTGCCCTGTTCTTCGCCTGTGCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTCTACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTGTGTTTTTGGCGCGATCGGTGTCGTTTAACTGTTAGAGGTGGTAGTAGTGTGCGAGTTTGTGGTGTGCCGCAATGGGAAGGTTCCT]




>consensus_4863#0
CGGTAGAACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATT
TAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAG
GTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATT
TTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAAC
CGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCG
GCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCC
GCCTACTGCACCGGTCTGCCCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACA
CCGCCAACTACATGCGCACGCTGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCA
GCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGCCC
ACGCCTCCATCCGCAAGGATCCCTCCTTCACGAAGAAACCCGAGAAGAAGGTCACCAAGA
AGCGGTGGACGATGGCCAAGTTGCCGCTCGCCGCCCGCAAGGAGAAGATCGCGAAGACCA
AGGCCGACTTCCTGGCCAAGATCCAGGCCGACGTCGAAGCCTAAGCGGGCTGCCCCGTCG
CCGTCGACCGTTCTTCTTCTCTTCGTGGTGGTGTATCATCCTTGTTCTGCCCTGTTCTTC
GCCTGTGCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTC
TACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTGTGTTTTTGGCGCGA
TCGGTGTCGTTTAACTGTTAGAGGTGGTAGTAGTGTGCGAGTTTGTGGTGTGCCGCAATG
GGAAGGTTCCT

consensusID : consensus_4863#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 676
fasta sequence

                              [CCGCGGACGCGTGGGG---TTTTCTCGCTGTTCTCATCCGCGATGGCCGCCAACAAGGAACGTACCTTCATCATGATCAAGCCCGATGGAGTCCAGCGTGGACTCGTCGGCCAGATCATGCAGCGCTTCGAGGCCAAGGGCTTCAAGCTGGTGGCGATGAAGTTCATGTGGCCATCGAAGGAGCTGCTCGAGAAGCACTACGCCGACCTGTCGGCCCGTCCGTTCTTCCCCGGACTGGTCACGTACATGAGCTCCGGCCCGGTCGTGCCGATGGTCTGGGAGGGCCTGAACGCCGTCAAGACCGGCCGCAAGATGCTGGGCGCCACCAACCCGGCCGACTCCGAGCCCGGCACCATCCGTGGCGATCTGTGCGTCCAGGTCGGACGTAACATCATCCACGGCTCGGATGCGGTCGAATCGGCCAACAAGGAGATCGCTCTGTGGTTCAAGGACGAGGAGCTGGTATCCTGGACGCCGGCCACCGAAGGATGGGTGTACGAGTAAAGCGCTTGTTCTCGGTGCAAACACGCGCACACACACGCGGGCTAACACTGAAACAATCAAGCATTTACACACTCACAGACACACAAACACACACTCTCTAACTCTCTAATCACTGTGTGAAGGAGAAGAAGGAGGAAAAGGAGTATTCCTGTTTTATTTTATACAATTATGTGTA]

[+] EMBL BM623253             [CCGCGGACGCGTGGGGCATTTTTCTCGCTGTTCTCATCCGCGATGGCCGCCAACAAGGAACGTACCTTCATCATGATCAAGCCCGATGGAGTCCAGCGTGGACTCGTCGGCCAGATCATGCAGCGCTTCGAGGCCAAGGGCTTCAAGCTGGTGGCGATGAAGTTCATGTGGCCATCGAAGGAGCTGCTCGAGAAGCACTACGCCGACCTGTCGGCCCGTCCGTTCTTCCCCGGACTGGTCACGTACATGAGCTCCGGCCCGGTCGTGCCGATGGTCTGGGAGGGCCTGAACGCCGTCAAGACCGGCCGCAAGATGCTGGGCGCCACCAACCCGGCCGACTCCGAGCCCGGCACCATCCGTGGCGATCTGTGCGTCCAGGTCGGACGTAACATCATCCACGGCTCGGATGCGGTCGAATCGGCCAACAAGGAGATCGCTCTGTGGTTCAAGGACGAGGAGCTGGTATCCTGGACGCCGGCCACCGAAGGATGGGTGTACGAGTAAAGCGCTTGTTCTCGGTGCAAACACGCGCACACACACGCGGGCTAACACTGAAACAATCAAGCATTTACACACTCACAGACACACAAACACACACTCTCTAACTCTCTAATCACTGTGTGAAGGAGAAGAAGGAGGAAAAGGAGTATTCCTGTTTTATTTTATACAATTATGTGTA]
[+] EMBL BM620594             [CCGCGGACGCGTGGGT   TTTTCTCGCTGTTCTCATCCGCGATGGCCGCCAACAAGGAACGTACCTTCATCATGATCAAGCCCGACGGAGTCCAGCGTGGACTCGTCGGCCAGATCATGCAGCGCTTCGAGGCCAAGGGCTTCAAGCTGGTCGCGATGAAGTTCATGTGGCCATCGAAGGAGCTGCTCGAGAAGCACTACGCCGACCTGTCGGCCCGTCCGTTCTTCCCCGGACTGGTCACGTACATGAGCTCCGGCCCGGTCGTACCGATGGTCTGGGAGGGCCTGAACGCCGTCAAGACCGGCCGCAAGATGCTGGGCGCCACCAACCCGGCCGACTCCGAGCCCGGCACCATCCGTGGCGATCTGTGCGTCCAGGTCGGACGTAACATCATCCACGGCTCGGATGCGGTCGAATCGGCCAACAAGGAGATCGCTCTGTGGTTCAAGGACGAGGAGCTGGTATCCTGGACGCCGGCCACCGAAGGATGGGTGTACGAGTAAAGCGCTTGTTCTCGGTGCAAACACGCGCACACACACGCGGGCTAACACTGAAACAATCAAGCATTTACACACTCACAGACACACAAACACACACTCTCTAACTCTCTAATCACTGTGTGAAGGAGAAGAAGGAGGAAAAGGAG                                ]
[+] EMBL BM645192             [CCGCGGACGCGT GGG   TTTTCTCGCTGTTCTCATCCGCGATGGCCGCCAACAAGGAACGTACCTTCATCATGATCAAGCCCGATGGAGTCCAGCGTGGACTCGTCGGCCAGATCATGCAGCGCTTCGAGGCCAAGGGCTTCAAGCTGGTGGCGATGAAGTTCATGTGGCCATCGAAGGAGCTGCTCGAGAAGCACTACGCCGACCTGTCGGCCCGTCCGTTCTTCCCCGGACTGGTCACGTACATGAGCTCCGGCCCGGTCGTGCCGATGGTCTGGGAGGGCCTGAACGCCGTCAAGACCGGCCGCAAGATGCTGGGCGCCACCAACCCGGCCGACTCCGAGCCCGGCACCATCCGTGGCGATCTGTGCGTCCAGGTCGGACGTAACATCATCCACGGCTCGGATGCGGTCGAATCGGCCAACAAGGAGATCGCTCTGTGGTTCAAGGACGAGGAGCTGGTATCCTGGACGCCGGCCACCGAAGGATGTGTGTACGAGTAAAGCGCTTGTTCTCGGTGCAAACACGCGCACACACACGCGGGCTAACACTGAAACAATCAAGCATTTACACACTCACAGACACACAAACACACACTCTCTAACTCTCTAATCACTGT                                                           ]




>consensus_4863#1
CCGCGGACGCGTGGGGTTTTCTCGCTGTTCTCATCCGCGATGGCCGCCAACAAGGAACGT
ACCTTCATCATGATCAAGCCCGATGGAGTCCAGCGTGGACTCGTCGGCCAGATCATGCAG
CGCTTCGAGGCCAAGGGCTTCAAGCTGGTGGCGATGAAGTTCATGTGGCCATCGAAGGAG
CTGCTCGAGAAGCACTACGCCGACCTGTCGGCCCGTCCGTTCTTCCCCGGACTGGTCACG
TACATGAGCTCCGGCCCGGTCGTGCCGATGGTCTGGGAGGGCCTGAACGCCGTCAAGACC
GGCCGCAAGATGCTGGGCGCCACCAACCCGGCCGACTCCGAGCCCGGCACCATCCGTGGC
GATCTGTGCGTCCAGGTCGGACGTAACATCATCCACGGCTCGGATGCGGTCGAATCGGCC
AACAAGGAGATCGCTCTGTGGTTCAAGGACGAGGAGCTGGTATCCTGGACGCCGGCCACC
GAAGGATGGGTGTACGAGTAAAGCGCTTGTTCTCGGTGCAAACACGCGCACACACACGCG
GGCTAACACTGAAACAATCAAGCATTTACACACTCACAGACACACAAACACACACTCTCT
AACTCTCTAATCACTGTGTGAAGGAGAAGAAGGAGGAAAAGGAGTATTCCTGTTTTATTT
TATACAATTATGTGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4863#0      CGGTAGAACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATT 60
consensus_4863#1      ------------------------------------------------------------
                                                                                  

consensus_4863#0      TAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAG 120
consensus_4863#1      ------------------------------------------------------------
                                                                                  

consensus_4863#0      GTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATT 180
consensus_4863#1      -----------CCGCGGACGCGTGGG---GTTTTCTCGCTGTTCTCATCCGCGA-TGGCC 45
                                  *** * **** ***   *        ** * * *    ***  **   

consensus_4863#0      TTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAAC 240
consensus_4863#1      GCCAACAAGGAACGTACCTTCATCATGATCAAGC-CCGATGGA--GTCC---------AG 93
                        * *  *  **   *  * ** ** *   ***  ***   **  ** *         * 

consensus_4863#0      CGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCG 300
consensus_4863#1      CGTGGACTCGTCGGCCAGATCATGCAG---CGCTTCGAGGCCAAGGGCTTCAAGCTGGTG 150
                      ** *   **  * ********  * *    *** ****** * *  ** **  *   * *

consensus_4863#0      GCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCT-GACCAACTATGCCG- 358
consensus_4863#1      GCGATGAAGTTCATGTGGCCAT-------CGAAGGAGCTGCTCGAGAAGCACTACGCCGA 203
                      **      *  *  *  ****        **     * ** **  **   **** **** 

consensus_4863#0      -CCGCCTACTGCACCGGTCTGCCCGTTGCTCGCCGCATCCTGCAGAAGCTGCG-CCTGGA 416
consensus_4863#1      CCTGTCGGCCCGTCCGTTCTTCCCCGGACTGGTCACGT---ACATGAGCTCCGGCCCGGT 260
                       * * *  *    *** *** ***    ** * * * *    **  **** ** ** ** 

consensus_4863#0      CACACCGCCAA-CTACATGCGC----ACGCTGGAGGAGGAGGACG-AGGAGGCGTTCAAG 470
consensus_4863#1      CGTGCCGATGGTCTGGGAGGGCCTGAACGCCGTCAAGACCGGCCGCAAGATGCTGGGCGC 320
                      *   ***     **    * **    **** *        ** ** * ** **       

consensus_4863#0      CGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTAC 530
consensus_4863#1      CACCAACCCGGCCG--ACTCCGAGCCCGGCACCATCCGTGGCGATCT---GTGCGTCC-- 373
                      * ***   * **    **  *  **  **** **    **  *** *      * **   

consensus_4863#0      AAGAACGCCCACGCCTCCATCCGCAAGGATCCCTCCTTCACGAAGAAACCCGAGAAGAAG 590
consensus_4863#1      -AGGTCGGACGTAACATCATCCAC--GGCTCGGATGCGGTCGAATCGGCC-AACAAGGAG 429
                       **  **  *    *  ***** *  ** **         ****    **  * *** **

consensus_4863#0      GTCACCAAGAAGCG-GTGGACGATGGCCAAGT-TGCCGCTCGCCGCCCGCAAGGAGAAGA 648
consensus_4863#1      ATCGCTCTGTGGTTCAAGGACGAGGAGCTGGTATCCTGGACGCCGGCCACCGAAGGATGG 489
                       ** *   *  *     ****** *  *  ** * * *  ***** ** *     ** * 

consensus_4863#0      TCGCGAAGACCAAGGCCGACTTCCTGGCCAAGATCCAGGCCGACGTCGAAGCCTAAGCGG 708
consensus_4863#1      GTGT-ACGAGTAAAGCG-----CTTGTTCTCGGTGCAAAC--ACGCGCACACACACGCGG 541
                        *  * **  ** **      * **  *  * * **  *  ***   *  *  * ****

consensus_4863#0      GCTGCC-CCGTCGCCGTCGACCGTTCTTCTTCTCTTCGTGGTGGTGTATCATCCTTGTTC 767
consensus_4863#1      GCTAACACTGAAACAATCAAGCATTTACACACTCACAGACACACA--AACACACACTCTC 599
                      ***  * * *   *  ** * * **      ***   *         * **  *    **

consensus_4863#0      TGCCCTGTTCTTCGCCTGTGCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTT 827
consensus_4863#1      TAACTCTCTAATCAC-TGTGTGAAGGAGAAG------AAGGAGGAAAAGGAGTATTCCTG 652
                      *  *    *  ** * **** ******  **      **     ****  *  **** * 

consensus_4863#0      TATTTTTTGCTTCTACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTGT 887
consensus_4863#1      TTTTATTTTATACAATTATGTGTA------------------------------------ 676
                      * ** ***  * * * ***  *                                      

consensus_4863#0      GTTTTTGGCGCGATCGGTGTCGTTTAACTGTTAGAGGTGGTAGTAGTGTGCGAGTTTGTG 947
consensus_4863#1      ------------------------------------------------------------
                                                                                  

consensus_4863#0      GTGTGCCGCAATGGGAAGGTTCCT 971
consensus_4863#1      ------------------------