cluster # 501

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Anopheles gambiae
cluster # 501 cluster # 501 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_501#0 length = 685 sequences # 1

consensus_501#1 length = 520 sequences # 1

consensusID : consensus_501#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence

                              [CCGGGGAAGGGCAGGAAAGCTGGCACGAAGAAAGACAACGGGCACGGTGAGGCTGGTGCGCCGCCGGGCGACAGTGCGGACGAGGGCAAGGGTGGTGGGTCGCGGCGCGATCGAAAGGAGAAGAAGCGGCACCATCATCACCATTCGCACCATCCGGGCGGCGGTATTGGCGGGCCGATTATGAGTGATTCGGCGCTGCAGCAGCGGGACGCTACCAGCAGCAGCAGCAGTCGGCGGTCGGTGGTGATAATAGCCATCATGGGTCGGATGCGGTTAGTGCTGGTGGCCCGAAGGACGATAGCTCATCCACGATGCATTCCAAGCGGCGGCTCGAGGAGGGAGAGTACGACGAAAATAGCAAAGAGTACAAACGGCTGCACGGGGATAGTCGCAGCAGTCATCGGGATCGGGACAAGAAGTGGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCGGGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAGCCCCGTACCCTGCCGATGGCAGTGCCTGGCGTGATCATCGGTATGTAGCAGCAACGAGAGGGGAGGAAGAAAGCAAGATTCGAAATACTTATTTTGTTTTGTCACCCGCTTTACGGTGTAGTTTCGGGCCGGATCATAAACGGGACCG]

[+] EMBL BM645702             [CCGGGGAAGGGCAGGAAAGCTGGCACGAAGAAAGACAACGGGCACGGTGAGGCTGGTGCGCCGCCGGGCGACAGTGCGGACGAGGGCAAGGGTGGTGGGTCGCGGCGCGATCGAAAGGAGAAGAAGCGGCACCATCATCACCATTCGCACCATCCGGGCGGCGGTATTGGCGGGCCGATTATGAGTGATTCGGCGCTGCAGCAGCGGGACGCTACCAGCAGCAGCAGCAGTCGGCGGTCGGTGGTGATAATAGCCATCATGGGTCGGATGCGGTTAGTGCTGGTGGCCCGAAGGACGATAGCTCATCCACGATGCATTCCAAGCGGCGGCTCGAGGAGGGAGAGTACGACGAAAATAGCAAAGAGTACAAACGGCTGCACGGGGATAGTCGCAGCAGTCATCGGGATCGGGACAAGAAGTGGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCGGGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAGCCCCGTACCCTGCCGATGGCAGTGCCTGGCGTGATCATCGGTATGTAGCAGCAACGAGAGGGGAGGAAGAAAGCAAGATTCGAAATACTTATTTTGTTTTGTCACCCGCTTTACGGTGTAGTTTCGGGCCGGATCATAAACGGGACCG]




>consensus_501#0
CCGGGGAAGGGCAGGAAAGCTGGCACGAAGAAAGACAACGGGCACGGTGAGGCTGGTGCG
CCGCCGGGCGACAGTGCGGACGAGGGCAAGGGTGGTGGGTCGCGGCGCGATCGAAAGGAG
AAGAAGCGGCACCATCATCACCATTCGCACCATCCGGGCGGCGGTATTGGCGGGCCGATT
ATGAGTGATTCGGCGCTGCAGCAGCGGGACGCTACCAGCAGCAGCAGCAGTCGGCGGTCG
GTGGTGATAATAGCCATCATGGGTCGGATGCGGTTAGTGCTGGTGGCCCGAAGGACGATA
GCTCATCCACGATGCATTCCAAGCGGCGGCTCGAGGAGGGAGAGTACGACGAAAATAGCA
AAGAGTACAAACGGCTGCACGGGGATAGTCGCAGCAGTCATCGGGATCGGGACAAGAAGT
GGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCA
GTGCACCGGGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAGCCC
CGTACCCTGCCGATGGCAGTGCCTGGCGTGATCATCGGTATGTAGCAGCAACGAGAGGGG
AGGAAGAAAGCAAGATTCGAAATACTTATTTTGTTTTGTCACCCGCTTTACGGTGTAGTT
TCGGGCCGGATCATAAACGGGACCG

consensusID : consensus_501#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 520
fasta sequence

                              [CCGAGCAGTCATCGGGATCGGGACAAGAAGTGGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCGGGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAGCCCCGTACCCTGCCGATGGTGGTGCCTGGCGTGATCATCGTTTCGGGCCGGATCATAAACGGGACCGGTACGACGGTTACGGCAGCAGCAGACACTCCTCCTCCTCCGGCGGCTACCATCGCGATCGGGATCGTGAGCGCGATCGGGACCGGGATCGGGATCGGGAGTGGGACCGTGATCGGGACCGTGACAGGGATCGCGATCGTGACCGGGGTGACCGGGCTTACAAGGACAAGCGAAGGTACCCTCCACCCGGTTCCGGCGGTTATTCCGGTGGCCACGGTTACGGTATGTCCCCGTCCGGGGGCTACTATCCGCCCGGCAGCGACAGCTCCTACCGCTATCCGATGGGCAGTGGCGGCGGGCGGCGGT]

[+] EMBL BM622599             [CCGAGCAGTCATCGGGATCGGGACAAGAAGTGGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCGGGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAGCCCCGTACCCTGCCGATGGTGGTGCCTGGCGTGATCATCGTTTCGGGCCGGATCATAAACGGGACCGGTACGACGGTTACGGCAGCAGCAGACACTCCTCCTCCTCCGGCGGCTACCATCGCGATCGGGATCGTGAGCGCGATCGGGACCGGGATCGGGATCGGGAGTGGGACCGTGATCGGGACCGTGACAGGGATCGCGATCGTGACCGGGGTGACCGGGCTTACAAGGACAAGCGAAGGTACCCTCCACCCGGTTCCGGCGGTTATTCCGGTGGCCACGGTTACGGTATGTCCCCGTCCGGGGGCTACTATCCGCCCGGCAGCGACAGCTCCTACCGCTATCCGATGGGCAGTGGCGGCGGGCGGCGGT]




>consensus_501#1
CCGAGCAGTCATCGGGATCGGGACAAGAAGTGGGACGAGTACGGGTCGGAGCGGGACCGC
ATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCGGGTACGCCGCAAAGCATGCGC
GGCGCCTATCCGGACGAACGGAGCCCAGCCCCGTACCCTGCCGATGGTGGTGCCTGGCGT
GATCATCGTTTCGGGCCGGATCATAAACGGGACCGGTACGACGGTTACGGCAGCAGCAGA
CACTCCTCCTCCTCCGGCGGCTACCATCGCGATCGGGATCGTGAGCGCGATCGGGACCGG
GATCGGGATCGGGAGTGGGACCGTGATCGGGACCGTGACAGGGATCGCGATCGTGACCGG
GGTGACCGGGCTTACAAGGACAAGCGAAGGTACCCTCCACCCGGTTCCGGCGGTTATTCC
GGTGGCCACGGTTACGGTATGTCCCCGTCCGGGGGCTACTATCCGCCCGGCAGCGACAGC
TCCTACCGCTATCCGATGGGCAGTGGCGGCGGGCGGCGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_501#0      CCGGGGAAGGGCAGGAAAGCTGGCACGAAGAAAGACAACGGGCACGGTGAGGCTGGTGCG 60
consensus_501#1      ------------------------------------------------------------
                                                                                 

consensus_501#0      CCGCCGGGCGACAGTGCGGACGAGGGCAAGGGTGGTGGGTCGCGGCGCGATCGAAAGGAG 120
consensus_501#1      ---CCGAGCAGTCATCGGGATCGGGACAAGAA--GTGGGACGAGTACGGGTCGGAGCGGG 55
                        *** **     *  ***   ** ****    ***** ** *    * *** *  * *

consensus_501#0      AAGAAGCGGCACCATCATCACCATT-CGCACCATCCGGGCGGCGGTATTGGCGGGCCGAT 179
consensus_501#1      ACCGCATGCGAAACGTACCACCGTCGTCCAGGGGCAGTGCACCGGGTACGCC--GCAAAG 113
                     *      *  *     * **** *    **    * * **  ***    * *  **  * 

consensus_501#0      TATGAGTGATTCGGCGCTGCAGCAGCGGGACGCTACCAGCAGCAGCAGCAGTCGGCGGTC 239
consensus_501#1      CATGCGCGGCGCCTATCCGGACGAACGGAGC-CCAGCCCCGTACCCTGCCGATGGTGGTG 172
                      *** * *   *    * * *  * ***  * * * *  *     * ** *  ** *** 

consensus_501#0      GGTGGTGATAATAGCCATCATGGGTCGGATGCGGTTAGTGCTGGTGGCCCGAAGG--ACG 297
consensus_501#1      CCTGGCG-TGATCATCGTTTCGGGCCGGAT--CATAAACGGGACCGGTACGACGGTTACG 229
                       *** * * **   * *   *** *****    * *  *     **  *** **  ***

consensus_501#0      ATAGCTCATCCACGATGCATTCCAAGCGGCGGCTCGAGGAGGGAGAGTACGACGAAAATA 357
consensus_501#1      GCAGCA-GCAGACACTCCTCCTCCTCCGGCGGCT--ACCATCGCGATCGGGATCGTGAGC 286
                       ***      **  * *    *   ********  *  *  * **    **     *  

consensus_501#0      GCAAAGAGTACAAACGGCTGCACGGGGATAGTCGCAGCAGTCATCGGGATCGGGACAAGA 417
consensus_501#1      GCGATCGGGACCGGGATCGGGATCGGGAG---TGGGACCGTGATCGGGACCGTGACAGGG 343
                     ** *   * **      * * *  ****     *   * ** ******* ** **** * 

consensus_501#0      AGTGGGACGAGTACGGGTCGGAGCGGGACCGCATGCGAAACGTACCACCGTCGTCCAGGG 477
consensus_501#1      ATCGCGATCGTGACCGGGGTGACCGGGCTTACAAG-GACAAGCGAAGGTACCCTCCACCC 402
                     *  * **     ** **   ** ****    ** * ** * *         * ****   

consensus_501#0      GCAGTGCACCGGGTACGCCGCAAAGCATGCGCGGCGCCTATCCGGACGAACGGAGCCCAG 537
consensus_501#1      G-GTTCCGGCGGTTATTCCGGTGGCCACGGTTACGGTATGTCCC--CGTCCGGGGGCTA- 458
                     *   * *  *** **  ***     ** *      *  * ***   **  *** * * * 

consensus_501#0      CCCCGTACCCTGCCGATGGCAGTGCCTGGCGTGATCATCGGTATGTAGCAGCAACGAGAG 597
consensus_501#1      -CTATCCGCCCGGCAGCGACAGCTCCTACCGCTATC--CGATGGGCAGTGGCGGCGGGCG 515
                      *      ** * *   * ***  ***  **  ***  ** *  * **  **  ** * *

consensus_501#0      GGGAGGAAGAAAGCAAGATTCGAAATACTTATTTTGTTTTGTCACCCGCTTTACGGTGTA 657
consensus_501#1      GCGGT------------------------------------------------------- 520
                     * *                                                         

consensus_501#0      GTTTCGGGCCGGATCATAAACGGGACCG 685
consensus_501#1      ----------------------------