Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5065 cluster # 5065       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5065#0 length = 1063 sequences # 4  
consensusID : consensus_5065#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1063
fasta sequence 
                              [GTAATCTCAATATTCCGAGCCAAAGCCTGATGCAATGTGCGATACAATCGAGTCCGCCTTCGTTGCCATCAGCCGGCTAGCTTCCTGCTCGGAGGCCACACACAACGTCGATCCCGTGCTCTTCCCGGACGGTGGTCTGCGGCCCGGAGAACTGATCGAAATCAGTGGCGACTCGAACAGTGGCAAATCGTTGCTCTGCCTCGAGCTGATCGCTCGCATCATCCTGCCCACGAGCTGTGGCGGCCTAGAGCTCGGTGCGGTCCTGATTGACTGTGAGAACAGCTACAGCAAAACCGTCCTGCTAAGCATCCTGGAAAAGCACATCTTGAACCACGCGGAACCAGCACTCGCCAGCACGCTGACCGATCCGCACCAGCTGGAAACCATTCAACGCGCCGCCCTGAGCCGGCTCCATCTGATCACGTGCTACTCGTTGGAGCAGTTTGAATTTTCCCTGCTCGCACTGCCGGCCCTGTTCGTGAAGCAGCCCGAGCTGACGTTTGTGCTGATCGATTCGATTGCCACCTTCTACTGGACCAAGTGTACGGCGAAAAACCTCATCCGGCAGGATACGTACCAGAAAGCGCACTGCAAAACGTTAAGCCGGCTGGCGGGCAAGTGGAAAAAGATCGTCCTGTTCACCAAACCGTCCCACTTTGGTGGACGACAAGCATCGGGGCGTGATTTCGAAGCGAACAGCGCAGGGGGAGCACTGTCGCTGGACGGATCTACACAGGCATCGTCGGTTGCGGGTCATCTTACGCCCTCGATCAGCACGGCGTCGTCCGCAGTCAGTTTGATTGACCATCGGATCGAACTGACCGAAATAGACAACCCGAGTCCGGGTGGGTCGGAGCAAGGCAGCGCCGA-CCAGCGGTTCAGTGCGTTCATTACGATGGCGGACAAGCAGCAGTACGTGCGCTTCTATCTGATCGACAAGTACGGGATCAACTGGATTGAGGCCTAATGTGCTCGCTCTGTATGATGGGTAAAATGTTACATTCCTCGAATTGTTGTCGCGATCCGGTTCTTTCCTTCAACCAAAAGTAGTGTAAATAAATTG]

[+] EMBL CNS08HF4             [GTAATCTCAATATTCCGAGCCAAAGCCTGATGCAATGTGCGATACAATCGAGTCCGCCTTCGTTGCCATCAGCCGGCTAGCTTCCTGCTCGGAGGCCACACACAACGTCGATCCCGTGCTCTTCCCGGACGGTGGTCTGCGGCCCGGAGAACTGATCGAAATCAGTGGCGACTCGAACAGTGGCAAATCGTTGCTCTGCCTCGAGCTGATCGCTCGCATCATCCTGCCCACGAGCTGTGGCGGCCTAGAGCTCGGTGCGGTCCTGATTGACTGTGAGAACAGCTACAGCAAAACCGTCCTGCTAAGCATCCTGGAAAAGCACATCTTGAACCACGCGGAACCAGCACTCGCCAGCACGCTGACCGATCCGCACCAGCTGGAAACCATTCAACGCGCCGCCCTGAGCCGGCTCCATCTGATCACGTGCTACTCGTTGGAGCAGTTTGAATTTTCCCTGCTCGCACTGCCGGCCCTGTTCGTGAAGCAGCCCGAGCTGACGTTTGTGCTAAAAAATTCGATTGCCACCTTCTACTGGACCAAGTGTACGGCGAAAAACCTCATCCGGCAGGATACGTACCAGAAAGCGCACTGCAAAACGTTAAGCCGGCTGGCGGGCAAGTGGAAAAAGATCGTCCTGTTCACCAAACCGTCCCACTTTGGTGGACGACAAGCATCGGGGCGTGATTTCGAAGCGAACAGCGCA GGGGAGCACTGTCGCTGGACGGATCTACACAGGCATCGTCGGTTGCGGGTCATCTTACGCCCTCGATCAGCACGGCGTCGTCCGCAGTCAGTTTGATTGACCATCGGATCGAACTGACCGAAATAGACAACCCGAGTCCGGGTGGGTCGGAGCAAGGCAGCG CGACCCAGCGGTTCAGTGCGTTCATTACGATGGCGGACAAGCAGCAGTACGTGCGCTTCTATCTGATCGACAAGTACGGGATCAACTGGATTaaagaaa                                                                                                  ]
[+] EMBL CNS08KOS             [                      AAGCCTG TGCAATGTGCGATACAATCGAGTCCGCCTTCGTTGCCATCAGCCGGCTAGCTTCCTGCTCGGAGGCCACACACAACGTCGATCCCGTGCTCTTCCCGGACGGTGGTCTGCGGCCCGGAGAACTGATCGAAATCAGTGGCGACTCGAACAGTGGCAAATCGTTGCTCTGCCTCGAGCTGATCGCTCGCATCATCCTGCCCACGAGCTGTGGCGGCCTAGAGCTCGGTGCGGTCCTGATTGACTGCGAGAACAGCTACAGCAAAACCGTCCTGCTAAGCATCCTGGAAAAGCACATCTTGAACCACGCGGAACCAGCACTCGCCAGCACGCTGACCGATCCGCACCAGCTGGAAACCATTCAACGCGCCGCCCTGAGCCGGCTCCATCTGATCACGTGCTACTCGTTGGAGCAGTTTGAATTTTCCCTGCTCGCACTGCCGGCCCTGTTCGTGAAGCAGCCCGAGCTGACGTTTGTGCTGATCGATTCGATTGCCACCTTCTACTGGACCAAGTGTACGGCGAAAAACCTCATCCGGCAGGATACGTACCAGAAAGCGCACTGCAAAACGTTAAGCCGGCTGGCGGGCAAGTGGAAAAAGATCGTCCTGTTCACCAAACCGTCCCACTTTGGTGGACGACAAGCATCGGGGCGTGATTTCGAAGCGAACAGCGCAGGGGGAGCACTGTCGCTGGACGGATCTACACAGGCATCGTCGGTTGCGGGTCATCTTACGCCCTCGATCAGCACGGCGTCGTCCGCAGTCAGTTTGATTGACCATCGGATCGAACTGACCGAAATAGACAACCCGAGTCCGGGTGGGTCGGAGCAAGGCAGCGCCGA CCAGCGGTTCAGTGCGTTCATTACGATGGCGGACAAGCAGCAGTACGTGCGCTTCTATCTGATCGACAAGTACGGGATCAACTGGATTGAGGCCTAATGTGCTCGCTCTGTATGATGGGTAAAATGTTACATTCCTCGAATTGTTG                                               ]
[-] EMBL CNS08KOT             [                                                                                                                                                                                                                                                                                                                                                                      aTGACCGATCCACACCAGCTGGAAACCATTCAACGCGCCGCCCTGAGCCGGCTCCATCTGATCACGTGCTACTCGTTGGAGCAGTTTGAATTTTCCCTGCTCGCACTGCCGGCCCTGTTCGTGAAGCAGCCCGGGCTGACGTTTGTGCTGATCGATTCGATTGCCACCTTCTACTGGACCAAGTGTACGGCGAAAAACCTCATCCGGCAGGATACGTACCAGAAAGCGAACTGCAAAACGTTAAGCCGGCTGGCGGGCAAGTGGAAAAAGATCGTCCTGTTCACCAAACCGTCCCACTTTGGTGGACGACAAGCATCGGGGCGTGATTTCGAAGCGAACAGCGCAGCGGGAGAACTGTCGCTGGACGGATCTAAACAGGCATCGTCGGTTGCGGGTCTTCTTACGCCCTCGATCAGCACGGCGTCGTCCGCAGTCAGTTTGATTGACCATCGGATCGAACTGACCGAAATAGACAACCCGAGTCCGGGTGGGTCGGAGCAAGGCAGCGCCGA CCAGCGGTTCAGTGCGTTCATTACGATGGCGGACAAGCAGCAGTACGTGCGCTTCTATCTGATCGACAAGTACGGGATCAACTGGATTGAGGCCTAATGTGCTCGCTCTGTATGATGGGTAAAATGTTACATTCCTCGAATTGTTGTCGCGATCCGGTTCTTTCCTTCAACCAAAAGTAGTGTAAATA     ]
[-] EMBL CNS08HF5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACGTTAAGCCGGCTGGCGGGCAAGTGGAAAAAGATCGTCCTGTTCACCAAACCGTCCCACTTTGGTGGACGACAAGCATCGGGGCGTGATTTCGAAGCGAACAGCGCAGCGGGAGAACTGTCGCTGGACGGATCTAAACAGGCATCGTCGGTTGCGGGTCTTCTTACGCCCTCGATCAGCACGGCGTCGTCCGCAGTCAGTTTGATTGACCATCGGATCGAACTGACCGAAATAGACAACCCGAGTCCGGGTGGGTCGGAGCAAGGCAGCGCCGA CCAGCGGTTCAGTGCGTTCATTACGATGGCGGACAAGCAGCAGTACGTGCGCTTCTATCTGATCGACAAGTACGGGATCAACTGGATTGAGGCCTAATGTGCTCGCTCTGTATGATGGGTAAAATGTTACATTCCTCGAATTGTTGTCGCGATCCGGTTCTTTCCTTCAACCAAAAGTAGTGTAAATAAATTG]




>consensus_5065#0
GTAATCTCAATATTCCGAGCCAAAGCCTGATGCAATGTGCGATACAATCGAGTCCGCCTT
CGTTGCCATCAGCCGGCTAGCTTCCTGCTCGGAGGCCACACACAACGTCGATCCCGTGCT
CTTCCCGGACGGTGGTCTGCGGCCCGGAGAACTGATCGAAATCAGTGGCGACTCGAACAG
TGGCAAATCGTTGCTCTGCCTCGAGCTGATCGCTCGCATCATCCTGCCCACGAGCTGTGG
CGGCCTAGAGCTCGGTGCGGTCCTGATTGACTGTGAGAACAGCTACAGCAAAACCGTCCT
GCTAAGCATCCTGGAAAAGCACATCTTGAACCACGCGGAACCAGCACTCGCCAGCACGCT
GACCGATCCGCACCAGCTGGAAACCATTCAACGCGCCGCCCTGAGCCGGCTCCATCTGAT
CACGTGCTACTCGTTGGAGCAGTTTGAATTTTCCCTGCTCGCACTGCCGGCCCTGTTCGT
GAAGCAGCCCGAGCTGACGTTTGTGCTGATCGATTCGATTGCCACCTTCTACTGGACCAA
GTGTACGGCGAAAAACCTCATCCGGCAGGATACGTACCAGAAAGCGCACTGCAAAACGTT
AAGCCGGCTGGCGGGCAAGTGGAAAAAGATCGTCCTGTTCACCAAACCGTCCCACTTTGG
TGGACGACAAGCATCGGGGCGTGATTTCGAAGCGAACAGCGCAGGGGGAGCACTGTCGCT
GGACGGATCTACACAGGCATCGTCGGTTGCGGGTCATCTTACGCCCTCGATCAGCACGGC
GTCGTCCGCAGTCAGTTTGATTGACCATCGGATCGAACTGACCGAAATAGACAACCCGAG
TCCGGGTGGGTCGGAGCAAGGCAGCGCCGACCAGCGGTTCAGTGCGTTCATTACGATGGC
GGACAAGCAGCAGTACGTGCGCTTCTATCTGATCGACAAGTACGGGATCAACTGGATTGA
GGCCTAATGTGCTCGCTCTGTATGATGGGTAAAATGTTACATTCCTCGAATTGTTGTCGC
GATCCGGTTCTTTCCTTCAACCAAAAGTAGTGTAAATAAATTG

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)