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Anopheles gambiae
cluster # 5237 cluster # 5237       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5237#0 length = 1846 sequences # 3  
 consensus_5237#1 length = 862 sequences # 1  
consensusID : consensus_5237#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1846
fasta sequence 
                              [GGTACCGGAAAAGCGGATCATTTTCCACTTCGTTCTAGTTCAGTATGGAATCGCTGGAAAAGCCAAATGCTGGGAAGGATGCCGAGAAGGATAAGGCTGTGACGAAGGCAAAGGGACGCCACCGGAGCAAGCACAAGTTCAACTCGATTCGCAAGCAGATAGAATTTTACTTCTCCGACGCTAACCTGACCAAAGACCGTTACATGGGACAGCTGCTGCGGAATGGGCCATTCATTCCACTGGAAGAGTTTTTAAAGTTCAACAAAATCAAAGCCCTCACTACGAACGTCGACGAGATAGCGAATGCGTTTGAAAAATTCCACCCTGCTGGAGCTTTCCGACGATCGGGCGAAGGTGCGCCGCAAGACGGAGGTTGTGGTGAAGGCCAACAGCGAGGAGTGTACGATCTACGTGGAAAGTTTGCCACCGAAAGCGGACCACGATTGGGTGCGGAATGTGTTTTCCAGCTACGGCACGGTGGCGTACGTATCGCTGCCCAAGTTTCGAAACTCGGGCAAAATCAAAGAGTTTGGCTTTGTGGAGTTCGACGAGGAGGCGAGTGTGCAGAAGGCACTGAAAGCGTTCCAAACGTTTGGCGGTGTGCTGGCGTACGATACGACGGACCCGGCCAAGATGGCAAGCATCAAGACGTACGAACCGGGAAAGGGAGCGCACAGCACGGTGAAGGCTCTGGCGAAACGAAAGCCGAACAGGGTGCTGACATGGAGAAGCCGAATGAATCATCCACCGGTTCGATGGCTGAAGACGATGGTAACAAGCGTGAGGAGGATGGCGATGAACCACCAGCGAAGAGACACAAAATCGATCCAACGAGTGACGAGGACGATGACACACAGGACGATCAGCAGTCGGATCGGGAAGCAAATGGGCAGAAGGTTGAGCCAGCAAGCGAAGAAGAGTTCCAGTCGGATCAGGAAGAGCCCGTCGGAGAGCATGATAACAAGGATGGGACGGACCAAGCAGAGGGTGATGGGCAGGATGTGAAACAAGACACTGGAAAGAAGAAATGCCGCCAAAGGAAGGGTTGCAGCATCATCAAGAAAGAGCTGCAGCTGGACGATAAGGTTTACGAGCTCAAAATAATGACCAAGAAAGAATGGCGCCGGCTGAGAAACAAGTATCTCAACCTGCAAAAGGAAGAGGCAAAAAAGTTGAAGCGCTTGTTCCACCAAACGGACAAGCATCATCATCATCATCATCATCATCAGCGGGGTGGCCATCCGAAGACGATTGCTTCCCATCCGAGCGGTGGAATTGCGATCAAATCGATTAAATCCTCCCCGAGGGTAAATTTCTACGGCGCCATGCCGGTTGAGGAGGACGAGGAGCACGGCGAGCAGGATGGTACCGGCAGCCACCTGCTTCAGCCGGAAGCGGCCGAGGAGAGTGCGGCCACGGCAAAGCGGCCGCTCTTCTCGTTCGAGCCCGGTCTGATCGTGAGCATAAAGTTTCGCGAACCGTGCGTCGATGTGAAGGATTTCCGGGCCGAGCTGAAGCAGTACCCGTACGTGAAGTATATTGACCTGAAGGAGGGCGACTTTGAGGCGTTTGTGCGCGTCGATACGCCCGCGTCGGCCGTGGCGCTCGTGAAGGAGTACTGCTCGGCGGAGCACAGCGCGCAGATACTGAGCGGCGAGCAGGAGCAGCAGTACTGGGACAAGATGATGCGCGACCGGGAGGACAAGCTGAACAAGCGCGTCAAGACGGAGCGCATTCGAGGGCGTACGAGGTTAATTCGTAAGATAAACAGTCACATTAAGTTTGATGATGACGATGAATAATGGCACAAAACGACCTTGATGGGATTATGGCGAAATAAAGTGAA]

[+] EMBL CNS09J00             [GGTACCGGAAAAGCGGATCATTTTCCACTTCGTTCTAGTTCAGTATGGAATCGCTGGAAAAGCCAAATGCTGGGAAGGATGCCGAGAAGGATAAGGCTGTGACGAAGGCAAAGGGACGCCACCGGAGCAAGCACAAGTTCAACTCGATTCGCAAGCAGATAGAATTTTACTTCTCCGACGCTAACCTGACCAAAGACCGTTACATGGGACAGCTGCTGCGGAATGGGCCATTCATTCCACTGGAAGAGTTTTTAAAGTTCAACAAAATCAAAGCCCTCACTACGAACGTCGACGAGATAGCGAATGCGTTTGAAAAATTCCACCCTGCTGGAGCTTTCCGACGATCGGGCGAAGGTGCGCCGCAAGACGGAGGTTGTGGTGAAGGCCAACAGCGAGGAGTGTACGATCTACGTGGAAAGTTTGCCACCGAAAGCGGACCACGATTGGGTGCGGAATGTGTTTTCCAGCTACGGCACGGTGGCGTACGTATCGCTGCCCAAGTTTCGAAACTCGGGCAAAATCAAAGAGTTTGGCTTTGTGGAGTTCGACGAGGAGGCGAGTGTGCAGAAGGCACTGAAAGCGTTCCAAACGTTTGGCGGTGTGCTGGCGTACGATACGACGGACCCGGCCAAGATGGCAAGCATCAAGACGTACGAACCGGGAAAGGGAGCGCACAGCACGGTGAAGGCTCTGGCGAAACGAAAGCCGAACAGGGTGCTGACATGGAGAAGCCGAATGAATCATCCACCGGTTCGATGGCTGAAGACGATGGTAACAAGCGTGAGGAGGATGGCGATGAACCACCAGCGAAGAGACACAAAATCGATCCAACGAGTGACGAGGACGATGACACACAGGACGATCAGCAGTCGGATCGGGAAGCAAATGGGCAGAAGGTTGAGCCAGCAAGCGAAGAAGAGTTCCAGTCGGATCAGGAAGAGCCCGTCGGAGAGCATGATAACAAGGATGGGACGGACCAAGCAGAGGGTGATGGGCAGGATGTGAAACAAGACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09J01             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATCAGCAGTCGGATCGGGAAGCAAATGGGCAGAAGGTTGAGCCAGCAAGCGAAGAAGAGTTCCAGTCGGATCAGGAAGAGCCCGTCGGAGAGCATGATAACAAGGATGGGACGGACCAAGCAGAGGGTGATGGGCAGGATGTGAAACAAGACACTGGAAAGAAGAAATGCCGCCAAAGGAAGGGTTGCAGCATCATCAAGAAAGAGCTGCAGCTGGACGATAAGGTTTACGAGCTCAAAATAATGACCAAGAAAGAATGGCGCCGGCTGAGAAACAAGTATCTCAACCTGCAAAAGGAAGAGGCAAAAAAGTTGAAGCGCTTGTTCCACCAAACGGACAAGCATCATCATCATCATCATCATCATCAGCGGGGTGGCCATCCGAAGACGATTGCTTCCCATCCGAGCGGTGGAATTGCGATCAAATCGATTAAATCCTCCCCGAGGGTAAATTTCTACGGCGCCATGCCGGTTGAGGAGGACGAGGAGCACGGCGAGCAGGATGGTACCGGCAGCCACCTGCTTCAGCCGGAAGCGGCCGAGGAGAGTGCGGCCACGGCAAAGCGGCCGCTCTTCTCGTTCGAGCCCGGTCTGATCGTGAGCATAAAGTTTCGCGAACCGTGCGTCGATGTGAAGGATTTCCGGGCCGAGCTGAAGCAGTACCCGTACGTGAAGTATATTGACCTGAAGGAGGGCGACTTTGAGGCGTTTGTGCGCGTCGATACGCCCGCGTCGGCCGTGGCGCTCGTGAAGGAGTACTGCTCGGCGGAGCACAGCGCGCAGATACTGAGCGGCGAGCAGGAGCAGCAGTACTGGGACAAGATGATGCGCGACCGGGAGGACAAGCTGAACAAGCGCGTCAAGACGGAGCGCATTCGAGGGCGTACGAGGTTAATTCGTAAGATAAACAGTCACATTAAGTTTGATGATGACGATGAATAATGGCACAAAACGACCTTGATGGGATTATGGCGA           ]
[+] EMBL BX623724             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cTGAAGCGCTTGTTCCACCAGACGGACAAGCATC     C TCATCATCATCATCAGCGGGGTGGCCATCCGAAGACGATTGCTTCCCATCCGAGCGGTGGAATTGCGATCAAATCGATCAAATCCTCCCCGAGGGTAAATTTCTACGGCGCCATGCCGGTTGAGGAGGACGAGGAGCACGGCGAGCAGGACGGAACCGGCAGCCACCTGCTTCAGCCGGAAGCGGCCGAGGAGAGTGCAGCCACGGCAAAGCGGCCGCTCTTTTCGTTCGAGCCCGGTCTGATCGTGAGCATAAAGTTTCGCGAACCGTGCGTCGATGTGAAGGATTTCCGGGCCGAGCTGAAGCAGTACCCGTACGTGAAGTATATTGACCTGAAGGAGGGCGACTTTGAGGCGTTTGTGCGCGTCGATACGCCTGCGTCGGCCGTGGCGCTCGTGAAGGAGTACTGCTCGGCGGAGCACAGCGCGCAGATACTGAGCGGCGAGCAGGAGCAGCAGTACTGGGACAAGATGATGCGCGACCGGGAGGACAAGCTGAACAAGCGCGTCAAGACGGAGCGCATTCGAGGGCGTACGAAGTTGATTCGTAAGATAAACAGTCACATTAAGTTTGATGATGACGATGAATAATGGCAC AAACGACCTTGGTGGAATTATGGCGAAATAAAGTGAA]




>consensus_5237#0
GGTACCGGAAAAGCGGATCATTTTCCACTTCGTTCTAGTTCAGTATGGAATCGCTGGAAA
AGCCAAATGCTGGGAAGGATGCCGAGAAGGATAAGGCTGTGACGAAGGCAAAGGGACGCC
ACCGGAGCAAGCACAAGTTCAACTCGATTCGCAAGCAGATAGAATTTTACTTCTCCGACG
CTAACCTGACCAAAGACCGTTACATGGGACAGCTGCTGCGGAATGGGCCATTCATTCCAC
TGGAAGAGTTTTTAAAGTTCAACAAAATCAAAGCCCTCACTACGAACGTCGACGAGATAG
CGAATGCGTTTGAAAAATTCCACCCTGCTGGAGCTTTCCGACGATCGGGCGAAGGTGCGC
CGCAAGACGGAGGTTGTGGTGAAGGCCAACAGCGAGGAGTGTACGATCTACGTGGAAAGT
TTGCCACCGAAAGCGGACCACGATTGGGTGCGGAATGTGTTTTCCAGCTACGGCACGGTG
GCGTACGTATCGCTGCCCAAGTTTCGAAACTCGGGCAAAATCAAAGAGTTTGGCTTTGTG
GAGTTCGACGAGGAGGCGAGTGTGCAGAAGGCACTGAAAGCGTTCCAAACGTTTGGCGGT
GTGCTGGCGTACGATACGACGGACCCGGCCAAGATGGCAAGCATCAAGACGTACGAACCG
GGAAAGGGAGCGCACAGCACGGTGAAGGCTCTGGCGAAACGAAAGCCGAACAGGGTGCTG
ACATGGAGAAGCCGAATGAATCATCCACCGGTTCGATGGCTGAAGACGATGGTAACAAGC
GTGAGGAGGATGGCGATGAACCACCAGCGAAGAGACACAAAATCGATCCAACGAGTGACG
AGGACGATGACACACAGGACGATCAGCAGTCGGATCGGGAAGCAAATGGGCAGAAGGTTG
AGCCAGCAAGCGAAGAAGAGTTCCAGTCGGATCAGGAAGAGCCCGTCGGAGAGCATGATA
ACAAGGATGGGACGGACCAAGCAGAGGGTGATGGGCAGGATGTGAAACAAGACACTGGAA
AGAAGAAATGCCGCCAAAGGAAGGGTTGCAGCATCATCAAGAAAGAGCTGCAGCTGGACG
ATAAGGTTTACGAGCTCAAAATAATGACCAAGAAAGAATGGCGCCGGCTGAGAAACAAGT
ATCTCAACCTGCAAAAGGAAGAGGCAAAAAAGTTGAAGCGCTTGTTCCACCAAACGGACA
AGCATCATCATCATCATCATCATCATCAGCGGGGTGGCCATCCGAAGACGATTGCTTCCC
ATCCGAGCGGTGGAATTGCGATCAAATCGATTAAATCCTCCCCGAGGGTAAATTTCTACG
GCGCCATGCCGGTTGAGGAGGACGAGGAGCACGGCGAGCAGGATGGTACCGGCAGCCACC
TGCTTCAGCCGGAAGCGGCCGAGGAGAGTGCGGCCACGGCAAAGCGGCCGCTCTTCTCGT
TCGAGCCCGGTCTGATCGTGAGCATAAAGTTTCGCGAACCGTGCGTCGATGTGAAGGATT
TCCGGGCCGAGCTGAAGCAGTACCCGTACGTGAAGTATATTGACCTGAAGGAGGGCGACT
TTGAGGCGTTTGTGCGCGTCGATACGCCCGCGTCGGCCGTGGCGCTCGTGAAGGAGTACT
GCTCGGCGGAGCACAGCGCGCAGATACTGAGCGGCGAGCAGGAGCAGCAGTACTGGGACA
AGATGATGCGCGACCGGGAGGACAAGCTGAACAAGCGCGTCAAGACGGAGCGCATTCGAG
GGCGTACGAGGTTAATTCGTAAGATAAACAGTCACATTAAGTTTGATGATGACGATGAAT
AATGGCACAAAACGACCTTGATGGGATTATGGCGAAATAAAGTGAA

consensusID : consensus_5237#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 862
fasta sequence 
                              [AAGAATTGCCTGAGGTTCGGCTGAGAAACAAGTATCTCCAACCTGCAAAAGGAATATGCAAAAAAGCTGAAGCGCTTGTTCCAGCAGACGGACAAGCATCCTCATCATCATCATCAGCGTGNTGTGTGCCATCCGAAGACGATTGCTTCCCATCCTGAGCTGGTGTGAATTGCGATCAAATCTGATCAAATCCTCCCCGAGTGGTAAATTTCTACGTGTGCCATGCCGGTTGAGTGAGTGACGAGTGAGCACTGNGTGAGCAGGACGGAACCGGATGGCACTGGTTCAGCCTGGAAGCTGTGCGAATGAGAGTTGCAGACCACAGGNGAAAGCGGCGCNTCTATTATACAGGTNACAGAGCCCGGGTCTGATCGTGAGCATTAACGTTCTCTGCGAACCGTGCGTCGATGTGAAGGATTTCGGGNCGCAGACTGAANCAAGTACACCCGTACAGATTAAGGTATATTGANCTTGAAACGAGNGGCCGAAATTATGAANGCGTAATGTGCAGCACTCTGCAATAANAGCCCTGGGGTACNGNACGAGTGGACCACCGTGAAACNGAGGTACCTGGTCCGGCAGGACACACAACANAGAGGCGGCCCAGAAAAATAACCATNTGNANNACCGAGGCGGGAAGCCANCAGGAAGANCACAAGCACAGACTAACATAGTGGGGAAACCACNANAGAAANTGACANTGACGGCCGGACACGGNGCGAGCAGACGGAACAANAGACGNCCTAAACCAAAGACGGACCGGTACNCAAAAGCACNAGGAGGCAAGACCGGCGCAATTACACTCAAAGAGTGNTGGATATACNNAANAANATATAGAATGTACGCNTGAACGACAATAAAA]

[+] EMBL AL696402             [AAGAATTGCCTGAGGTTCGGCTGAGAAACAAGTATCTCCAACCTGCAAAAGGAATATGCAAAAAAGCTGAAGCGCTTGTTCCAGCAGACGGACAAGCATCCTCATCATCATCATCAGCGTGNTGTGTGCCATCCGAAGACGATTGCTTCCCATCCTGAGCTGGTGTGAATTGCGATCAAATCTGATCAAATCCTCCCCGAGTGGTAAATTTCTACGTGTGCCATGCCGGTTGAGTGAGTGACGAGTGAGCACTGNGTGAGCAGGACGGAACCGGATGGCACTGGTTCAGCCTGGAAGCTGTGCGAATGAGAGTTGCAGACCACAGGNGAAAGCGGCGCNTCTATTATACAGGTNACAGAGCCCGGGTCTGATCGTGAGCATTAACGTTCTCTGCGAACCGTGCGTCGATGTGAAGGATTTCGGGNCGCAGACTGAANCAAGTACACCCGTACAGATTAAGGTATATTGANCTTGAAACGAGNGGCCGAAATTATGAANGCGTAATGTGCAGCACTCTGCAATAANAGCCCTGGGGTACNGNACGAGTGGACCACCGTGAAACNGAGGTACCTGGTCCGGCAGGACACACAACANAGAGGCGGCCCAGAAAAATAACCATNTGNANNACCGAGGCGGGAAGCCANCAGGAAGANCACAAGCACAGACTAACATAGTGGGGAAACCACNANAGAAANTGACANTGACGGCCGGACACGGNGCGAGCAGACGGAACAANAGACGNCCTAAACCAAAGACGGACCGGTACNCAAAAGCACNAGGAGGCAAGACCGGCGCAATTACACTCAAAGAGTGNTGGATATACNNAANAANATATAGAATGTACGCNTGAACGACAATAAAA]




>consensus_5237#1
AAGAATTGCCTGAGGTTCGGCTGAGAAACAAGTATCTCCAACCTGCAAAAGGAATATGCA
AAAAAGCTGAAGCGCTTGTTCCAGCAGACGGACAAGCATCCTCATCATCATCATCAGCGT
GNTGTGTGCCATCCGAAGACGATTGCTTCCCATCCTGAGCTGGTGTGAATTGCGATCAAA
TCTGATCAAATCCTCCCCGAGTGGTAAATTTCTACGTGTGCCATGCCGGTTGAGTGAGTG
ACGAGTGAGCACTGNGTGAGCAGGACGGAACCGGATGGCACTGGTTCAGCCTGGAAGCTG
TGCGAATGAGAGTTGCAGACCACAGGNGAAAGCGGCGCNTCTATTATACAGGTNACAGAG
CCCGGGTCTGATCGTGAGCATTAACGTTCTCTGCGAACCGTGCGTCGATGTGAAGGATTT
CGGGNCGCAGACTGAANCAAGTACACCCGTACAGATTAAGGTATATTGANCTTGAAACGA
GNGGCCGAAATTATGAANGCGTAATGTGCAGCACTCTGCAATAANAGCCCTGGGGTACNG
NACGAGTGGACCACCGTGAAACNGAGGTACCTGGTCCGGCAGGACACACAACANAGAGGC
GGCCCAGAAAAATAACCATNTGNANNACCGAGGCGGGAAGCCANCAGGAAGANCACAAGC
ACAGACTAACATAGTGGGGAAACCACNANAGAAANTGACANTGACGGCCGGACACGGNGC
GAGCAGACGGAACAANAGACGNCCTAAACCAAAGACGGACCGGTACNCAAAAGCACNAGG
AGGCAAGACCGGCGCAATTACACTCAAAGAGTGNTGGATATACNNAANAANATATAGAAT
GTACGCNTGAACGACAATAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5237#0      GGTACCGGAAAAGCGGATCATTTTCCACTTCGTTCTAGTTCAGTATGGAATCGCTGGAAA 60
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      AGCCAAATGCTGGGAAGGATGCCGAGAAGGATAAGGCTGTGACGAAGGCAAAGGGACGCC 120
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      ACCGGAGCAAGCACAAGTTCAACTCGATTCGCAAGCAGATAGAATTTTACTTCTCCGACG 180
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      CTAACCTGACCAAAGACCGTTACATGGGACAGCTGCTGCGGAATGGGCCATTCATTCCAC 240
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      TGGAAGAGTTTTTAAAGTTCAACAAAATCAAAGCCCTCACTACGAACGTCGACGAGATAG 300
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      CGAATGCGTTTGAAAAATTCCACCCTGCTGGAGCTTTCCGACGATCGGGCGAAGGTGCGC 360
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      CGCAAGACGGAGGTTGTGGTGAAGGCCAACAGCGAGGAGTGTACGATCTACGTGGAAAGT 420
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      TTGCCACCGAAAGCGGACCACGATTGGGTGCGGAATGTGTTTTCCAGCTACGGCACGGTG 480
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      GCGTACGTATCGCTGCCCAAGTTTCGAAACTCGGGCAAAATCAAAGAGTTTGGCTTTGTG 540
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      GAGTTCGACGAGGAGGCGAGTGTGCAGAAGGCACTGAAAGCGTTCCAAACGTTTGGCGGT 600
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      GTGCTGGCGTACGATACGACGGACCCGGCCAAGATGGCAAGCATCAAGACGTACGAACCG 660
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      GGAAAGGGAGCGCACAGCACGGTGAAGGCTCTGGCGAAACGAAAGCCGAACAGGGTGCTG 720
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      ACATGGAGAAGCCGAATGAATCATCCACCGGTTCGATGGCTGAAGACGATGGTAACAAGC 780
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      GTGAGGAGGATGGCGATGAACCACCAGCGAAGAGACACAAAATCGATCCAACGAGTGACG 840
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      AGGACGATGACACACAGGACGATCAGCAGTCGGATCGGGAAGCAAATGGGCAGAAGGTTG 900
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      AGCCAGCAAGCGAAGAAGAGTTCCAGTCGGATCAGGAAGAGCCCGTCGGAGAGCATGATA 960
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      ACAAGGATGGGACGGACCAAGCAGAGGGTGATGGGCAGGATGTGAAACAAGACACTGGAA 1020
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      AGAAGAAATGCCGCCAAAGGAAGGGTTGCAGCATCATCAAGAAAGAGCTGCAGCTGGACG 1080
consensus_5237#1      ------------------------------------------------------------
                                                                                  

consensus_5237#0      ATAAGGTTTACGAGCTCAAAATAATGACCAAGAAAGAATGGCG--CCGGCTGAGAAACAA 1138
consensus_5237#1      -----------------------------AAGAATTGCCTGAGGTTCGGCTGAGAAACAA 31
                                                   *****      * *   **************

consensus_5237#0      GTATCTC-AACCTGCAAAAGGAAGAGGCAAAAAAGTTGAAGCGCTTGTTCCACCAAACGG 1197
consensus_5237#1      GTATCTCCAACCTGCAAAAGGAATATGCAAAAAAGCTGAAGCGCTTGTTCCAGCAGACGG 91
                      ******* *************** * ********* **************** ** ****

consensus_5237#0      ACAAGCATCATCATCATCATCATCATCATCAGCGGGGTGGCCATCCGAAGACGATTGCTT 1257
consensus_5237#1      ACAAGCATCCTCATCATCATCATCAGCGT--GNTGTGTG-CCATCCGAAGACGATTGCTT 148
                      ********* *************** * *  *  * *** ********************

consensus_5237#0      CCCATCC-GAGC-GGTG-GAATTGCGATCAAATC-GATTAAATCCTCCCCGAG-GGTAAA 1312
consensus_5237#1      CCCATCCTGAGCTGGTGTGAATTGCGATCAAATCTGATCAAATCCTCCCCGAGTGGTAAA 208
                      ******* **** **** **************** *** ************** ******

consensus_5237#0      TTTCTACG-GCGCCATGCCGGTTGAG-GAG-GACGAG-GAGCAC--GGCGAGCAGGATGG 1366
consensus_5237#1      TTTCTACGTGTGCCATGCCGGTTGAGTGAGTGACGAGTGAGCACTGNGTGAGCAGGACGG 268
                      ******** * *************** *** ****** ******   * ******** **

consensus_5237#0      TACCGGCAGCCACCTGCTTCAGCCGGAAGCGG--CCGAGGAGAGT-GCGG-CCAC--GGC 1420
consensus_5237#1      AACCGGATGGCACTGGTTCAGCCTGGAAGCTGTGCGAATGAGAGTTGCAGACCACAGGNG 328
                       *****  * ***  * *    * ****** *  *  * ****** ** * ****  *  

consensus_5237#0      AAAGCGGCCGCTCTTCT-------CGTTCGAGCCCGG-TCTGATCGTGAGCATAAAGTTT 1472
consensus_5237#1      AAAGCGGCGCNTCTATTATACAGGTNACAGAGCCCGGGTCTGATCGTGAGCATTAACGTT 388
                      ********   ***  *            ******** *************** **  **

consensus_5237#0      C---GCGAACCGTGCGTCGATGTGAAGGATTTCCGGGC-CGAGCTGAAGCAG---TACCC 1525
consensus_5237#1      CTCTGCGAACCGTGCGTCGATGTGAAGGATTTCGGGNCGCAGACTGAANCAAGTACACCC 448
                      *   ***************************** ** * *   ***** **     ****

consensus_5237#0      GTACG---TGAAGTATATTGACCTGAAGGAGGGCGACT-------TTGAGGCGTT-TGTG 1574
consensus_5237#1      GTACAGATTAAGGTATATTGANCTTGAAACGAGNGGCCGAAATTATGAANGCGTAATGTG 508
                      ****    * * ********* **  *   * * * *        *  * ****  ****

consensus_5237#0      C--------GCGTCGATACGCCCGCG---TCGGCCGTG---GCGCTCGTGAA---GGAGT 1617
consensus_5237#1      CAGCACTCTGCAATAANAGCCCTGGGGTACNGNACGAGTGGACCACCGTGAAACNGAGGT 568
                      *        **    * *  ** * *     *  ** *    *   ******   *  **

consensus_5237#0      ACT--GCTCGGCGGAGCACAGCGCGCAGATACTGAGCGGCGAGCAGG--AGCAGCAGTAC 1673
consensus_5237#1      ACCTGGTCCGGCAGGACACACAACANAGAGGCGGCCCAGAAAAATAACCATNTGNANNAC 628
                      **   *  **** *  ****   *  ***  * *  * *  *       *   * *  **

consensus_5237#0      TGGGACAAGATGATGC----GCGACCGGGAGGACAAGCTGAACAAGCGCG----TCAAGA 1725
consensus_5237#1      CGAGGCGGGAAGCCANCAGGAAGANCACAAGCACAGACTAACATAGTGGGGAAACCACNA 688
                       * * *  ** *          ** *   ** ***  ** *   ** * *     **  *

consensus_5237#0      CGGAGCG---CATTCGAGGGCGTACGAGGT-TAATTCGTAAGATAAACAGTCACATTAAG 1781
consensus_5237#1      NAGAAANTGACANTGACGGCCGGACACGGNGCGAGCAGACGGAACAANAGACGNCCTAAA 748
                        **      ** *   ** ** **  **    *   *   **  ** ** *    *** 

consensus_5237#0      TTTGATGATGAC-GATGAATAATGGCACAAAACGACC---TTGATGGGATTATGGCGAAA 1837
consensus_5237#1      CCAAAGACGGACCGGTACNCAAAAGCACNAGGAGGCAAGACCGGCGCAATTACACTCAAA 808
                          *    *** * *    **  **** *   * *      *  *  ****     ***

consensus_5237#0      TAA-AGTGAA-------------------------------------------- 1846
consensus_5237#1      GAGTGNTGGATATACNNAANAANATATAGAATGTACGCNTGAACGACAATAAAA 862
                       *    ** *


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)