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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5725#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 838 fasta sequence
[CCGCGAGAGCACGCAGCCGGTGTTTATCGTGTGCTTCAACATGGCCAACATGGACACGATTGCGACGATGCTCATCAGCAAGGGCATCATGATGCTGATCTCCGTGTTCTTCCTGCTCGTCACGCTCTACATCTACTACATCATACCGGACCTGCGCGAAACGCAGGACAAGGTGACGTCGGCAGCCGTCGGCAGCCTGGCCGTATTCATGTTCCTGCTCAGCCTGGTCCAGCTGTGGGTGTCACTAACGCACACGCCCTTCTGCACCGTCATCGCGTTCCTGATGTACTTCTTCCTCATCAGCTACTTCGCATGGTTGAACATGGTGATGGCGAACGTATGGAAATTGACAGTTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCAGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTATATCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACATGAGCGAAGGTCTGGTGCCCCAGTCCTGGTTTTGGATCATCGTCGACGCGGTCAACTGTCTGCACGGGGTGCTCATCTTCTTCGTTCTGATCGTCTGGCGGCAGCGCATCAAGCGCGAGCTG]
[+] EMBL BM638184 [CCGCGAGAGCACGCAGCCGGTGTTTATCGTGTGCTTCAACATGGCCAACATGGACACGATTGCGACGATGCTCATCAGCAAGGGCATCATGATGCTGATCTCCGTGTTCTTCCTGCTCGTCACGCTCTACATCTACTACATCATACCGGACCTGCGCGAAACGCAGGACAAGGTGACGTCGGCAGCCGTCGGCAGCCTGGCCGTATTCATGTTCCTGCTCAGCCTGGTCCAGCTGTGGGTGTCACTAACGCACACGCCCTTCTGCACCGTCATCGCGTTCCTGATGTACTTCTTCCTCATCAGCTACTTCGCATGGTTGAACATGGTGATGGCGAACGTATGGAAATTGACAGTTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCAGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTATAT ]
[+] EMBL BM599191 [ CCGGCGCGAAACGCAGGACAAGGTGACGTCGGCAGCCGTCGGCAGCCTGGCCGTATTCATGTTCCTGCTCAGCCTGGTCCAGCTGTGGGTGTCACTAACGCACACGCCCTTCTGCACCGTCATCGCGTTCCTGATGTACTTCTTCCTCATCAGCTACTTCGCATGGTTGAACATGGTGATGGCGAACGTATGGAAATTGACAGTTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCAGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTATATCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACATGAGCGAAGGTCTGGTGCCCCAGTCCTGGTTTTGGATCATCGTCGACGCGGTCAACTGTCTGCACGGGGTGCTCATCTTCTTCGTTCTGATCGTCTGGCGGCAGCGCATCAAGCGCGAGCTG]
consensusID : consensus_5725#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 599 fasta sequence
[CCGCCATCCTGTCATCCCACGGTCCCGTGCGTGGGATTTCCAGTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAAGTGAGTTTTTGTCCTTCTAATAGAATTGAGTGTCGTTCGTTGCCTCCATTCAGAAGCCTCCTTCATATTGACTCGCTCTCTGTCTGTTTTCCTTTCCCTGCTTTCCTTCCAGCCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCGGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTGTATCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACATGAGCGAAGGTCTGGTGCCCCAGTCCTGGTTTTGGATCATCGTCGACGCGGTCAACTGTCTGCACGGGGTGCTCATCTTCTT]
[+] EMBL BM603197 [CCGCCATCCTGTCATCCCACGGTCCCGTGCGTGGGATTTCCAGTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAAGTGAGTTTTTGTCCTTCTAATAGAATTGAGTGTCGTTCGTTGCCTCCATTCAGAAGCCTCCTTCATATTGACTCGCTCTCTGTCTGTTTTCCTTTCCCTGCTTTCCTTCCAGCCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCGGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTGTATCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACATGAGCGAAGGTCTGGTGCCCCAGTCCTGGTTTTGGATCATCGTCGACGCGGTCAACTGTCTGCACGGGGTGCTCATCTTCTT]
consensusID : consensus_5725#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 561 fasta sequence
[TCATCCCACGGTCCCGTGCGTGGGATTTCCAGTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCGGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTGTATCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACATGAGCGAAGGTCTGGTGCCCCAGTCCTGGGTTTTGGATCATCGTCGACGCNGTCAACTGTCTGCACNNGGTGCTCATCTNNCTTCGTGCTGATCGTCTGGCGGCAGCGCATCAAGCGCGAGCNGGGCCAACCGGTNGGTGTTCTGCTTCCGGGGCGCCGGCACCGCT]
[+] EMBL BX619235 [TCATCCCACGGTCCCGTGCGTGGGATTTCCAGTGCACGCCGGTGGAAGATCCGAGAGCGATCCTGGTATATCCTGAACCACATCTACGCCATCACCGTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGTGAAATCTCCTGCTGGTTCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCTGAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGCGAGCGGGGACGACCTTAGCCCGGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTGTATCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACATGAGCGAAGGTCTGGTGCCCCAGTCCTGGGTTTTGGATCATCGTCGACGCNGTCAACTGTCTGCACNNGGTGCTCATCTNNCTTCGTGCTGATCGTCTGGCGGCAGCGCATCAAGCGCGAGCNGGGCCAACCGGTNGGTGTTCTGCTTCCGGGGCGCCGGCACCGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5725#0 CCGCGAGAGCACGCAGCCGGTGTTTATCGTGTGCTTCAACATGGCCAACATGGACACGAT 60
consensus_5725#2 ------------------------------------------------------------
consensus_5725#1 ------------------------------------------------------------
consensus_5725#0 TGCGACGATGCTCATCAGCAAGGGCATCATGATGCTGATCTCCGTGTTCTTCCTGCTCGT 120
consensus_5725#2 ------------------------------------------------------------
consensus_5725#1 ------------------------------------------------------------
consensus_5725#0 CACGCTCTACATCTACTACATCATACCGGACCTGCGCGAAACGCAGGACAAGGTGACGTC 180
consensus_5725#2 ------------------------------------------------------------
consensus_5725#1 ------------------------------------------------------------
consensus_5725#0 GGCAGCCGTCGGCAGCCTGGCCGTATTCATGTTCCTGCTCAGCCTGGTCCAGCTGTGGGT 240
consensus_5725#2 ------------------------------------------------------------
consensus_5725#1 ---------CCGCCATCCTGTCAT-CCCACGGTCCCGTGCG--TGGGATTTCCAGTGCAC 48
consensus_5725#0 GTCACTAACGCACACGCCCTTCTGCACCGTCATCGCGT-TCCTGATGTACTTCTTCCTCA 299
consensus_5725#2 ------------------------------------------------------------
consensus_5725#1 GCCGGTGGAAGATCCGA------GAGCGATCCTGGTATATCCTGAACCACATCTACGCCA 102
consensus_5725#0 TCAGCTACTTCGCATGGTTGAACATGGTGATGGCGAACGTATGGAAATTGACAGTTGCAC 359
consensus_5725#2 ---------------------TCATCCCACGGTCCCGTGCGTGGGATTT--CCAGTGCAC 37
consensus_5725#1 TCACCGTCGCAGTGACGTTAACGACCATGGT-TTACATTTATCACAGCCGGTATCCG-AC 160
* * * * **
consensus_5725#0 GCCGGTGGAAGATCCGAGAGCGATCCTG-GTATATCCTGAACCACATCTACGCCATCACC 418
consensus_5725#2 GCCGGTGGAAGATCCGAGAGCGATCCTG-GTATATCCTGAACCACATCTACGCCATCACC 96
consensus_5725#1 GCTGGGTGAAATCTCCTGCTGGTTCCGAAGTGAGTTTTTGTCCTTCTAATAGAATTGAGT 220
** ** *** * * * *** ** * * ** * * * *
consensus_5725#0 GTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGT 478
consensus_5725#2 GTCGCAGTGACGTTAACGACCATGGTTTACATTTATCACAGCCGGTATCCGACGCTGGGT 156
consensus_5725#1 GTCGTT-CGTTGCCTCCATTCAGAAGCCTCCTTCATATTGACTCGCTCTCTGT-CTGTTT 278
**** * * * ** * ** ** * * * *** *
consensus_5725#0 GAAATCTCCTGCTGGT-TCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCT 537
consensus_5725#2 GAAATCTCCTGCTGGT-TCCGAACCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCT 215
consensus_5725#1 TCCTTTCCCTGCTTTCCTTCCAGCCGAGCGGGAACAGTCGTACTTCGTCTACCTACCGCT 338
* ****** * * * *************************************
consensus_5725#0 GAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGC 597
consensus_5725#2 GAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGC 275
consensus_5725#1 GAGCGTGATGCTGAGCATAAACATTTTCCTGTTCGTCTGGACGAGCCTGCATCTGCATGC 398
************************************************************
consensus_5725#0 GAGCGGGGACGACCTTAGCCCAGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTATA 657
consensus_5725#2 GAGCGGGGACGACCTTAGCCCGGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTGTA 335
consensus_5725#1 GAGCGGGGACGACCTTAGCCCGGATCGAAAAAAGTCACTCCGGTACAAGTGCATGCTGTA 458
********************* *********************************** **
consensus_5725#0 TCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACAT 717
consensus_5725#2 TCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACAT 395
consensus_5725#1 TCTGAAGCTGTTCCTGCTGTCCGGGCTGATCTGGGTGTTCGAGATCCTGTCGTTCCACAT 518
************************************************************
consensus_5725#0 GAGCGAAGGTCTGGTGCCCCAGTCCTGG-TTTTGGATCATCGTCGACGCGGTCAACTGTC 776
consensus_5725#2 GAGCGAAGGTCTGGTGCCCCAGTCCTGGGTTTTGGATCATCGTCGACGCNGTCAACTGTC 455
consensus_5725#1 GAGCGAAGGTCTGGTGCCCCAGTCCTGG-TTTTGGATCATCGTCGACGCGGTCAACTGTC 577
**************************** ******************** **********
consensus_5725#0 TGCACGGGGTGCTCATCTTC-TTCGTTCTGATCGTCTGGCGGCAGCGCATCAAGCGCGAG 835
consensus_5725#2 TGCACNNGGTGCTCATCTNNCTTCGTGCTGATCGTCTGGCGGCAGCGCATCAAGCGCGAG 515
consensus_5725#1 TGCACGGGGTGCTCATCTTCTT-------------------------------------- 599
***** *********** *
consensus_5725#0 CTG------------------------------------------- 838
consensus_5725#2 CNGGGCCAACCGGTNGGTGTTCTGCTTCCGGGGCGCCGGCACCGCT 561
consensus_5725#1 ----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||