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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5771#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1194 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCAGTGGTGATAGTATTACATAAACTGGTGCTCTAGACTGGAGCAGCAGTTAATAACCTCAGTCAACATTACGGAGACACACTTAGGCACCATAGTATTAGACTACACTATACCGTATTGAAATAGTTAGACATTGAAGTTGGAGGCGACAACTTCGAACTTCGCGCATAGGAAAATTCTAGATTAAATCCTCCTCAGCGGGTGAGGACCGCGTGACAATACTGTAGTGAACAATTGTTGTAAAATTCGTAAGCAAGTCATTCGGGACATTCGGCAGATTCTGGAAAACCCAACAAAGAGAAGCGTTTCGTGCTACAGAAAGAGTTCCAATTTCCTGCGCCATACAAAATGCGTGACTAGACACATACACACACACACACAAAGAGAGTGTGAGGAACGGAAGACACATCGTCGTTCTCATTTCCGGGAAGTACGAGTACGAGCTAGCAGCAACAGTAACAACAGTATTACAGTGGAGGCTTGTCCAGCACAACTGTCGTGAACGCGAACGGCGGCAACTGTGCGTGT--GTGTGTTGGGAAAGCAGCTCGGGAAGTAGCAGGTGTATCTGCTCTGGTGCCATCTTGTCGTGTGTCCACAGCACACCGCCGGAAAACTACTGCCGACCGAAGAAACGAACCACGGCAACCAGCAAACACCGTTAGCAGTCCAATGAAACCAAGTTTCAAGAACGGAAAGTTCGCCACATCCATCTACGAAAAATGTCTCTGCCAAAAGAATGGAATCTCCAGACATCGCAGGAGTGTCTTAATCAGTACCTGCGCCCACAAAGCCTCTTTTCGGAGGATATCGAAATACAGCCCCACGCGGACGATAACCGGCTCCGGTTCGACGGCGTGTACCATCCCTCCATCCCGGAGCAGCGATGCCGGGCGCCTCTCAATGCTGCCCTGCTGGCCGAGTTCGAGAACAGTGGTTCCATGTTCTCGATCCAGTCCGCACCGGTCGTTACCGCTGCTGCAGTCTCGACCACGGCCGCACCGACGACGACGACCGTCACCGAAGGTCCGAGCCTGCTGCTCGATGACTTTGGCATCCCAACGCAACCGGTTGCAGGAACGACGACGACGACCAACGGCGCCGGCGATGAACGCAGCGACACACTGCTCCCGGCCTTCCTCACTGGCCCTCGATACGCACTACAACCTG]
[+] EMBL BM604613 [CCGCGGACGCGTGGGCGGACGCGTGGGCAGTGGTGATAGTATTACATAAACTGGTGCTCTAGACTGGAGCAGCAGTTAATAACCTCAGTCAACATTACGGAGACACACTTAGGCACCATAGTATTAGACTACACTATACCGTATTGAAATAGTTAGACATTGAAGTTGGAGGCGACAACTTCGAACTTCGCGCATAGGAAAATTCTAGATTAAATCCTCCTCAGCGGGTGAGGACCGCGTGACAATACTGTAGTGAACAATTGTTGTAAAATTCGTAAGCAAGTCATTCGGGACATTCGGCAGATTCTGGAAAACCCAACAAAGAGAAGCGTTTCGTGCTACAGAAAGAGTTCCAATTTCCTGCGCCATACAAAATGCGTGACTAGACACATACACACACACACACAAAGAGAGTGTGAGGAACGGAAGACACATCGTCGTTCTCATTTCCGGGAAGTACGAGTACGAGCTAGCAGCAACAGTAACAACAGTATTACAGTGGAGGCTTGTCCAGCACAACTGTCGTGAACGCGAACGGCGGCAACTGTGCGTGT GTGTGTTGGGAAAGCAGCTCGGGAAGTAGCAGGTGTATCTGCTCTGGTGCCATCTTGTCGTGTGTCCACAGCACACCGCCGGAAAACTACTGCCGACCGAAGAAACGAACCACGGCAACCAGCAAACACCGTT ]
[+] EMBL BM621455 [ ccGCTTGTCCAGCACAACTGTCCTGAACGCGAACGGCGGTAACTGTGCGTGTGAGTGTGTTGGGAAAGCTGCTCGGGAAGTAGCAGGTGTATCTGCTCTGGTGCCATCTTGTCGTGTGTCCACAGCACACCGCCGGAAAACTACTGCCGACCGAAGAAACGAACCACGG AACCAGCAAACACCGTTAGCAGTCCAATGAAACCAAGTTTCAAGAACGGAAAGTTCGCCACATCCATCTACGAAAAATGTCTCTGCCAAAAGAATGGAATCTCCAGACATCGCAGGAGTGTCTTAATCAGTACCTGCGCCCACAAAGCCTCTTTTCGGAGGATATCGAAATACAGCCCCACGCGGACGATAACCGGCTCCGGTTCGACGGCGTGTACCATCCCTCCATCCCGGAGCAGCGATGCCGGGCGCCTCTCAATGCTGCCCTGCTGGCCGAGTTCGAGAACAGTGGTTCCATGTTCTCGATCCAGTCCGCACCGGTCGTTACCGCTGCTGCAGTCTCGACCACGGCCGCACCGACGACGACGACCGTCACCGAAGGTCCGAGCCTGCTGCTCGATGACTTTGGCATCCCAACGCAACCGGTTGCAGGAACGACGACGACGACCAACGGCGCCGGCGATGAACGCAGCGACACACTGCTCCCGGCCTTCCTCACTGGCCCTCGATACGCACTACAACCTG]
consensusID : consensus_5771#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 929 fasta sequence
[CCGACTTGCACGGGGTGGTCCACTGTCCACGGGCAGTCATTTTCTTTTCGACCACTGCGCTCAGTGCACCGCCGGAGTTGTGTTTTGTGCAAGTACCTAATTCCAATAGAATCAGGCTCTGCTGTCCTGACCAGCCTTCCTTGCCTCCCCTCTCCTGCAGAATTCTGGTAACGATCCAAGTGTGTGTTCTCGCGCCCACGTGTGTGTGTGCAGGTGAAAAAAGAAGCAACTAAAACCACCGAATTTTCCACGCTTCCAGTTGTGAAAAGAGAGAAAAGAATTTGGCTTTTAACCAACGACCACCCGCGCGCAGTGTGTGATATAGTTAGATAATTTGTACGGGACTGGCAGGAACTAGCCCCGGACAGAAAAAAAAGTTAGGCTCAAAAGGTTCGACACCGTGTCGGATTACGTATACTCTGGACGTTTTTTGTTTTTTGTTTTAATTTGGTTTGGGTCTTCGTGTGAAGGCTTTTATCTGTCCGGTTCTCGCCTACTACAGATCCTTACGAAGGTGTTGTAATTTTTGCGTTGTGTTACGTGTGCAAGAGGTACACCAGAAACGGATTGCCAAATCGAAGCAAGCACAGAAAGTAAGAGGTTACAGCAGAAAGAGAGAGGTATAGCTTTACCACCACACCACCAAAGTAGATTTGTCTGAAAGACAAGTTCAGTGGTGATAGTATTACATAAACTGGTGCTCTAGACTGGAGCAGCAGTTAATAACCTCAGTCAACATTACGGAGACACACTTAGGCACCATAGTATTAGACTACACTATACCGTATTGAAATAGTTAGACATTGAAGTTGGAGGCGACCACTTCGAACTTCGCGCATAGGAAAATTCTAGATTAAATCCTCCTCAGCGGGTGGAGGACCGCGTGACAATACTGTAGTGGACGAATTGGTGTAAAATTCGTAAGCAAG]
[+] EMBL BM651319 [CCGACTTGCACGGGGTGGTCCACTGTCCACGGGCAGTCATTTTCTTTTCGACCACTGCGCTCAGTGCACCGCCGGAGTTGTGTTTTGTGCAAGTACCTAATTCCAATAGAATCAGGCTCTGCTGTCCTGACCAGCCTTCCTTGCCTCCCCTCTCCTGCAGAATTCTGGTAACGATCCAAGTGTGTGTTCTCGCGCCCACGTGTGTGTGTGCAGGTGAAAAAAGAAGCAACTAAAACCACCGAATTTTCCACGCTTCCAGTTGTGAAAAGAGAGAAAAGAATTTGGCTTTTAACCAACGACCACCCGCGCGCAGTGTGTGATATAGTTAGATAATTTGTACGGGACTGGCAGGAACTAGCCCCGGACAGAAAAAAAAGTTAGGCTCAAAAGGTTCGACACCGTGTCGGATTACGTATACTCTGGACGTTTTTTGTTTTTTGTTTTAATTTGGTTTGGGTCTTCGTGTGAAGGCTTTTATCTGTCCGGTTCTCGCCTACTACAGATCCTTACGAAGGTGTTGTAATTTTTGCGTTGTGTTACGTGTGCAAGAGGTACACCAGAAACGGATTGCCAAATCGAAGCAAGCACAGAAAGTAAGAGG ]
[+] EMBL BM652015 [ ccgAAGAATTTGGCTTTTAACCAACGACCACCCGCGCGCAGTGTGTGATATAGTTAGATAATTTGTACGGGACTGGCAGGAACTAGCCCCGGACAG AAAAAAAGTTAGGCTCAAAAGGTTCGACACCGTGTCGGATTACGTATACTCTGGACGTTTTTTGTTTTTTGTTTTAATTTGGTTTGGGTCTTCGTGTGAAGGCTTTTATCTGTCCGGTTCTCGCCTACTACAGATCCTTACGAAGGTGTTGTAATTTTTGCGTTGTGTTACGTGTGCAAGAGGTACACCAGAAACGGATTGCCAAATCGAAGCAAGCACAGAAAGTAAGAGGTTACAGCAGAAAGAGAGAGGTATAGCTTTACCACCACACCACCAAAGTAGATTTGTCTGAAAGACAAGTTCAGTGGTGATAGTATTACATAAACTGGTGCTCTAGACTGGAGCAGCAGTTAATAACCTCAGTCAACATTACGGAGACACACTTAGGCACCATAGTATTAGACTACACTATACCGTATTGAAATAGTTAGACATTGAAGTTGGAGGCGACCACTTCGAACTTCGCGCATAGGAAAATTCTAGATTAAATCCTCCTCAGCGGGTGGAGGACCGCGTGACAATACTGTAGTGGACGAATTGGTGTAAAATTCGTAAGCAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5771#0 CCGCGGACGCGTGGGCGGACGCGTGGGCAGTGGTGATAGTATTACATAAACTGGTGCTCT 60
consensus_5771#1 ------------------------------------CCGACTTGCACGGGGTGGTCCACT 24
* ** ** **** * **
consensus_5771#0 AGACTGGAGCAGCAGTTAATAACCTCAGTCAACATTACGGAGACACACTTAGGCACCATA 120
consensus_5771#1 GTCCACGGGCAGTCATTT----TCTTTTCGACCACTGCG----CTCAGTGCACCGCCGGA 76
* * **** ** ** * ** * ** * ** * * ** *
consensus_5771#0 GTATTAGACTACACTA-TACCGTATTGAAATAG--TTAGACATTGAAGTTGGAGGCGACA 177
consensus_5771#1 GTTGTGTTTTGTGCAAGTACCTAATTCCAATAGAATCAGGCTCTGCTGTCCTGACCAGCC 136
** * * * * **** *** ***** * ** * ** ** * *
consensus_5771#0 ACTTCGAACTTCGCGCATAGG-AAAATTCTAGATTAAATCCTCCTCAGCGGGTGAGGACC 236
consensus_5771#1 TTCCTTGCCTCCCCTCTCCTGCAGAATTCTGGTAACGATCCA----AGTGTGT---GTTC 189
** * * * * * ****** * **** ** * ** * *
consensus_5771#0 GCGTGACAATACTGTAGTGAACAATTGTTGTAAAATTCGTAAGCAAGTCATTCGGGACAT 296
consensus_5771#1 TCGCGCCCACGTGTGTGTGTGCAG--GTGAAAAAAGAAGCAACTAAAAC-CACCGAATTT 246
** * * * *** ** ** **** * ** ** * * * * *
consensus_5771#0 TCGGCAGATTCTGGAAAACCCAACAAAGAGAAGCGTTTCGTGCTACAGAAAGAGTTCCAA 356
consensus_5771#1 TCCAC-GCTTCCAGTTGTGAAAAGAGAGAAAAGAATTTGGCTTTTAACCAA------CGA 299
** * * *** * ** * *** *** *** * * * ** * *
consensus_5771#0 TTTCCTGCGCCATACAAAATGCGTGACTAGACACATACACACACACACACAAAGAGAGTG 416
consensus_5771#1 CCACCCGCGCGCAGTGTGTGATATAGTTAGATA-ATTTGTACGGGACTGGCAGGAACTAG 358
** **** * **** * ** ** * ** *
consensus_5771#0 TGAGGAACGGAAGACACATCGTCGTTCTCATTTCCGGGAAGTACGAGTACGAGCTAGCAG 476
consensus_5771#1 CCCCGGACAGAAAAAAAA--GTTAGGCTCA------AAAGGTTCGACACCGTGTCGG--A 408
* ** *** * * * ** **** * ** *** ** * *
consensus_5771#0 CAACAGTAACAACAGTATTACAGTGGAGGCTTGTCCAGCACAACTGTCGTGAACGCGAAC 536
consensus_5771#1 TTACGTATACTCTGGACGTTTTTTGTTTTTTGTTTTAATTTGGT--TTGGGTCTTCGTGT 466
** ** * * ** * * * * * * **
consensus_5771#0 GGCGGCAACTGTGCGTGTGTGTGTTGGGAAA-GCAGCTCGGGAAGTAGCAGGTGTATCTG 595
consensus_5771#1 GAAGGCTTTTATCTGTCCGGTTCTCGCCTACTACAGATCCTTACGAAGGTGTTGTAATTT 526
* *** * * ** * * * * * *** ** * * ** * **** *
consensus_5771#0 CTCTGGTGCCATCTTGTCGTGTGTCCACAGCACACCGCCGGAAAACTACTGCCGACCGAA 655
consensus_5771#1 TTGCGTTG------TGTTACGTGTGCAAGAGGTAC-ACCAGAAACGGATTGCCAA---AT 576
* * ** *** **** ** ** ** **** * **** * *
consensus_5771#0 GAAACGAACCACGGCAACCAGCAAACACCGTTAGCAGTCCAATGAAACCAAGTTTCAAGA 715
consensus_5771#1 CGAAGCAAGCACAGAAAGTAAGAGGTTACAGCAGAAAG--AGAGAGGTATAGCTTTA--- 631
** ** *** * ** * * * ** * * ** ** ** *
consensus_5771#0 ACGGAAAGTTCGCCACATCCATCTACGAAAAATGTCTCTGCCAAAAGAATGGAATCTCCA 775
consensus_5771#1 ---------CCACCACA-CCACC-----AAAGTAGATTTGTCTGAAAGACAAG---TTCA 673
* ***** *** * *** * * ** * ** * * **
consensus_5771#0 GACATCGCAGGAGTGTCTTAATCAGTACCTGCGCCCACAAAGCCTCTTTTCGGAGGATAT 835
consensus_5771#1 GTGGTGATAGTATTACATAAACTGGTGCTCTAGACTGGAGCAGCAGTT-------AATAA 726
* * ** * * * ** ** * * * * * ** ***
consensus_5771#0 CGAAATACAGCCCCACGCGGACGATAACCGGCTCCGGTTCGACGGCGTGTACCATCCCTC 895
consensus_5771#1 CCTCAGTCAACATTACGGAGACACACTTAGGCACCATAGTATTAGACTACACTATAC--- 783
* * ** * *** *** *** ** * * ** ** *
consensus_5771#0 CATCCCGGAGCAGCGATGCCGGGCGCCTCTCAATGCTGCCCTGCTGGCCGAGTTCGAGAA 955
consensus_5771#1 CGTATTGAAATAGTTAGAC--ATTGAAGTTGGAGGCGACCACTTCGA---ACTTCGCGCA 838
* * * * ** * * * * * ** ** * * **** * *
consensus_5771#0 CAGTGGTTCCATGTTCTCGATCCAGTCCGCACCGGTCGTTACCGCTGCTGCAGTCTCGAC 1015
consensus_5771#1 TAGGAAAATTCTAGATTAAATCCTCCTCA-GCGGGTGGAGGACCGCGTGACAATACTG-T 896
** * * **** * * *** * * * ** * *
consensus_5771#0 CACGGCCGCACCGACGACGACGACCGTCACCGAAGGTCCGAGCCTGCTGCTCGATGACTT 1075
consensus_5771#1 AGTGGACGAATTGGTG-TAAAATTCGTAAGCAAG-------------------------- 929
** ** * * * * *** * * *
consensus_5771#0 TGGCATCCCAACGCAACCGGTTGCAGGAACGACGACGACGACCAACGGCGCCGGCGATGA 1135
consensus_5771#1 ------------------------------------------------------------
consensus_5771#0 ACGCAGCGACACACTGCTCCCGGCCTTCCTCACTGGCCCTCGATACGCACTACAACCTG 1194
consensus_5771#1 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||