cluster # 5946

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Anopheles gambiae
cluster # 5946 cluster # 5946 Sequences # 5 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5946#0 length = 1065 sequences # 3

consensus_5946#1 length = 698 sequences # 1
consensus_5946#2 length = 659 sequences # 1

consensusID : consensus_5946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1065
fasta sequence

                              [AGCGAAT-CGCCACGAGG-TNA-TCCGACGCGATACACGATCCACCAAAACCAGCGTATATCGGCACACATCGCGCAGCTACCGGGAGCAAGTCGCTCCGATACAACCGCACCGATCGACTTTTCCGCGTCACCTCCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGTGGACTACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCGGACCGTTCGGACCGGCCGCTCAGCTGCCGGGCGCAGTCGGCGGCTATCCGGGCGCGGTCGGAGGGTATCCGGGCGCGGTCGGCGGTTTGCCCATGTACCCGGGCCGTCCCGGCCTTGGACAGCTGCCCGTGTACCCGCCGCTCTACCCGGCCGCACCGATGCTGCCCCCGACGCCGGCCATGCCGTA-CGCTTACGGTCGCGCCATG-CCGGCGATGATG-CCAGTTG-CGCCCCCACCGGCAGCCAACCTGCGCACCGTTGCCTCGAACACCGACGTGCTGGGACGGTTGG-CTGTGGCCGACCTGCCGAGGATTTG-CAGCAGNCGCGCCCA--GGACATG-CAGGGCCG-CA--GCG-AGCAGGGCCTTACGAACGCCTGCGAAACAGATGGCTGACGAACGGAACCGGAGTCCGTACTTGGGCAGTACAAGGCGCTTGCAATGCGGCTTCCCAAGGGCTTGGATGGCACACCCGTCCTTGGAACCCGCGGGGCGNAAAAGGGGCTTCATCGGAGGCCAGGGAAAGGCTTACAGGGGGAACCGCCTTCGGGAGACGGGCACAGACGGGNTGGANCCGGGTATGGCATTGGCCAGACCNCAGCGAGGANCACACACTTGGATTNGGTGTTTCAAGGCCCAAGGGTTTGAGCCACGTTAACCCAGCGGCAGGNCGAAAGTGGCCGTTAAAAACCCGTTGGGATAACCCCCCGAGCGATTTGTCACAAAATAGGGNCCTCTCGAANACGGNGTTTTCAGGAACACATTNCGGNGANTTCNAAGATTGACACCCTANNANNGGACGACAGCANTGTCGATTTGGGGAAAACANCGCGANAACCA]

[+] EMBL BX619585             [AGCGAATACGGCACGAGGAACACTCCGACGCCATACACGATCCACCAAAACCAGCGTATATCGGCACACATCGCGCAGCTACCGGGAGCAAGTCGCTCCGATACAACCGCACCGATCGACTTTTCCGCGTCACCTCCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGTGGACTACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCGGACCGTTCGGACCGGCCGCTCAGCTGCCGGGCGCAGTCGGCGGCTATCCGGGCGCGGTCGGAGGGTATCCGGGCGCGGTCGGCGGTTTGCCCATGTACCCGGGCCGTCCCGGCCTTGGACAGCTGCCCGTGTACCCGCCGCTCTACCCGGCCGCACCGATGCTGCCCCCGACGCCGGCCATGCCGTACCGCTTACGGTCGCGCCATGCCCGGCGATGATGNCCAGTTGCCGCCCCCca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX466262             [    AAT CGCCACGAGG TNA TCCGACGCGATACACGATCCACCAAAACCAGCGTATATCGGCACACATCGCGCAGCTACCGGGAGCAAGTCGCTCCGATACAACCGCACCGATCGACTTTTCCGCGTCACCTCCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGTGGACTACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCGGACCGTTCGGACCGGCCGCTCAGCTGCCGGGCGCAGTCGGCGGCTATCCGGGCGCGGTCGGAGGGTATCCGGGCGCGGTCGGCGGTTTGCCCATGTACCCGGGCCGTCCCGGCCTTGGACAGCTGCCCGTGTACCCGCCGCTCTACCCGGCCGCACCGATGCTGCCCCCGACGCCGGCCATGCCGTA CGCTTACGGTCGCGCCATG CCGGCGATGATG CCAGTTG CGCCCCCACCGGCAGCCAACCTGCGCACCGTTGCCTCGAACACCGACGTGCTGGGACGGTTGG CTGTGGCCGACCTGCCGAGGATTTG CAGCAGNCGCGCCCA  GGACATG CAGGGCCG CA  GCG AGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX467608             [     AT CNCCACGAGG TN     GACGCGATACACGATCCACCAACAACAGCGTATATCGGCACACATCGCGCAGCTACCGGGAGCAAGTCGCTCCGATACAACCGCACCGATCGACTTTTCCGCGTCACCTCCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGTGGACTACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCGGACCGTTCGGACCGGCCGCTCAGCTGCCGGGCGCAGTCGGCGGCTATCCGGGCGCGGTCGGAGGGTATCCGGGCGCGGTCGGCGGTTTGCCCATGTACCCGGGCCGTCCCGGCCTTGGACAGCTGCCCGTGTACCCGCCGCTCTACCCGGCCGCACCGATGCTG CCCCGACGCCGGCCATGCCGTA CGCTTACGGTCGCGCCATG CCGGCGATGATG CCAGTTG CGCCCCCACCGGTNGGCAACCTGCGCACCGTTGCCTCGAACACCGAC TGCTGGGACGGTTGGCCTGTGGCCGACCTGCC AGGATTTGCCAGCA  CGCGCCCAAGGGACATGNCACGGACGCCANGGCGAAGCAGGGCCTTACGAACGCCTGCGAAACAGATGGCTGACGAACGGAACCGGAGTCCGTACTTGGGCAGTACAAGGCGCTTGCAATGCGGCTTCCCAAGGGCTTGGATGGCACACCCGTCCTTGGAACCCGCGGGGCGNAAAAGGGGCTTCATCGGAGGCCAGGGAAAGGCTTACAGGGGGAACCGCCTTCGGGAGACGGGCACAGACGGGNTGGANCCGGGTATGGCATTGGCCAGACCNCAGCGAGGANCACACACTTGGATTNGGTGTTTCAAGGCCCAAGGGTTTGAGCCACGTTAACCCAGCGGCAGGNCGAAAGTGGCCGTTAAAAACCCGTTGGGATAACCCCCCGAGCGATTTGTCACAAAATAGGGNCCTCTCGAANACGGNGTTTTCAGGAACACATTNCGGNGANTTCNAAGATTGACACCCTANNANNGGACGACAGCANTGTCGATTTGGGGAAAACANCGCGANAACCA]




>consensus_5946#0
AGCGAATCGCCACGAGGTNATCCGACGCGATACACGATCCACCAAAACCAGCGTATATCG
GCACACATCGCGCAGCTACCGGGAGCAAGTCGCTCCGATACAACCGCACCGATCGACTTT
TCCGCGTCACCTCCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGTGGACTA
CTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCGGACCG
TTCGGACCGGCCGCTCAGCTGCCGGGCGCAGTCGGCGGCTATCCGGGCGCGGTCGGAGGG
TATCCGGGCGCGGTCGGCGGTTTGCCCATGTACCCGGGCCGTCCCGGCCTTGGACAGCTG
CCCGTGTACCCGCCGCTCTACCCGGCCGCACCGATGCTGCCCCCGACGCCGGCCATGCCG
TACGCTTACGGTCGCGCCATGCCGGCGATGATGCCAGTTGCGCCCCCACCGGCAGCCAAC
CTGCGCACCGTTGCCTCGAACACCGACGTGCTGGGACGGTTGGCTGTGGCCGACCTGCCG
AGGATTTGCAGCAGNCGCGCCCAGGACATGCAGGGCCGCAGCGAGCAGGGCCTTACGAAC
GCCTGCGAAACAGATGGCTGACGAACGGAACCGGAGTCCGTACTTGGGCAGTACAAGGCG
CTTGCAATGCGGCTTCCCAAGGGCTTGGATGGCACACCCGTCCTTGGAACCCGCGGGGCG
NAAAAGGGGCTTCATCGGAGGCCAGGGAAAGGCTTACAGGGGGAACCGCCTTCGGGAGAC
GGGCACAGACGGGNTGGANCCGGGTATGGCATTGGCCAGACCNCAGCGAGGANCACACAC
TTGGATTNGGTGTTTCAAGGCCCAAGGGTTTGAGCCACGTTAACCCAGCGGCAGGNCGAA
AGTGGCCGTTAAAAACCCGTTGGGATAACCCCCCGAGCGATTTGTCACAAAATAGGGNCC
TCTCGAANACGGNGTTTTCAGGAACACATTNCGGNGANTTCNAAGATTGACACCCTANNA
NNGGACGACAGCANTGTCGATTTGGGGAAAACANCGCGANAACCA

consensusID : consensus_5946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [AGCAAAAAGCAACTCGTTCCAAGCGAGAAGTTGTGCCCGCACTCGTCGAAGCGAAAGAAAAGCGCCCGGTGGTTTTTCCCCACTTTTTGCCTCAGTGCTTTTTCGCGTGTGTCCTACCGACCGAGACCAACAACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCATTCGATCCCCGCTTCCCCAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCTACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGGGAGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTATGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAATTTGAAATTCAACCTACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAGGTGCC]

[+] EMBL CNS08FRJ             [AGCAAAAAGCAACTCGTTCCAAGCGAGAAGTTGTGCCCGCACTCGTCGAAGCGAAAGAAAAGCGCCCGGTGGTTTTTCCCCACTTTTTGCCTCAGTGCTTTTTCGCGTGTGTCCTACCGACCGAGACCAACAACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCATTCGATCCCCGCTTCCCCAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCTACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGGGAGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTATGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAATTTGAAATTCAACCTACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAGGTGCC]




>consensus_5946#1
AGCAAAAAGCAACTCGTTCCAAGCGAGAAGTTGTGCCCGCACTCGTCGAAGCGAAAGAAA
AGCGCCCGGTGGTTTTTCCCCACTTTTTGCCTCAGTGCTTTTTCGCGTGTGTCCTACCGA
CCGAGACCAACAACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCATTCGATCCC
CGCTTCCCCAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCTACCGC
TGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCG
TCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTT
GCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGGGAGCGCTGA
TGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTATGCATACACCCTTTGCTAG
TAAACCATCAGAAGTAACAGAAATTTGAAATTCAACCTACTACTACTACTGCTACCACCA
GCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGA
TCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAGGTGCC

consensusID : consensus_5946#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGCTCGTTCCAAGCGAGAAGTTGTGCCCGCATCGTCGAAGCGAAAGAAAAGCGCCCGGTGGTTTTTCCCCACTTTTTGCCTCAGTGCTTTTTCGCGTGTGTCCTACCGACCGAGACCTACCCCGTACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCATTCGATCCCCGCTTCCCGAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCCACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGGGAGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTTTGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAATTTGAAATTCAACCTACTACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAA]

[+] EMBL BM620645             [CCGCGGACGCGTGGGCGGACGCGTGGGCTCGTTCCAAGCGAGAAGTTGTGCCCGCATCGTCGAAGCGAAAGAAAAGCGCCCGGTGGTTTTTCCCCACTTTTTGCCTCAGTGCTTTTTCGCGTGTGTCCTACCGACCGAGACCTACCCCGTACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCATTCGATCCCCGCTTCCCGAACCAGAACCAGACCAAGCACTGCTACCAGAGCTATCTGGATTTCCACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTACTTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAGCGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAGAGAGAGAGGGAGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTTTGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAATTTGAAATTCAACCTACTACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAA]




>consensus_5946#2
CCGCGGACGCGTGGGCGGACGCGTGGGCTCGTTCCAAGCGAGAAGTTGTGCCCGCATCGT
CGAAGCGAAAGAAAAGCGCCCGGTGGTTTTTCCCCACTTTTTGCCTCAGTGCTTTTTCGC
GTGTGTCCTACCGACCGAGACCTACCCCGTACCAGCGAGAAGATGGCGTACGAACCGAAG
ACGGCCCCATTCGATCCCCGCTTCCCGAACCAGAACCAGACCAAGCACTGCTACCAGAGC
TATCTGGATTTCCACCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGGTATGCAAGTAC
TTCAAGAACGTCTTCTCGTCGATGTGCCCCAACTCGTGGGTTGAGAAGTGGGACAGCCAG
CGCGAGGAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAACCGGGAGAGGGAG
AGAGAGAGGGAGCGCTGATGTTTGGTGCAACGATGTCGTCGCTCTCCCGGGATCCCTTTT
TGCATACACCCTTTGCTAGTAAACCATCAGAAGTAACAGAAATTTGAAATTCAACCTACT
ACTACTACTACTGCTACCACCAGCAATACAAATCCGGAAGAAGAATGTTGTGTCGCGTGC
GCAACGTTGCCATCCGTCACGATCCACGTGGCGCGGGCACGCGATGAAATTGAAATAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5946#1      ------------------------------------------------------------
consensus_5946#2      ------------------------------------------------------------
consensus_5946#0      AGCGAATCGCCACGAGGTNATCCGACGCGATACACGATCCACCAAAACCAGCGTATATCG 60
                                                                                  

consensus_5946#1      ------------------------------------------------------------
consensus_5946#2      ------------------------------------------------------------
consensus_5946#0      GCACACATCGCGCAGCTACCGGGAGCAAGTCGCTCCGATACAACCGCACCGATCGACTTT 120
                                                                                  

consensus_5946#1      ------------------------------------------------------------
consensus_5946#2      ------------------------------------------------------------
consensus_5946#0      TCCGCGTCACCTCCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGTGGACTA 180
                                                                                  

consensus_5946#1      ------------------------------------------------------------
consensus_5946#2      ------------------------------------------------------------
consensus_5946#0      CTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCGGACCG 240
                                                                                  

consensus_5946#1      --------------------------------------------------------AGCA 4
consensus_5946#2      -----------------------------------------CCGCGGACGCGTGGGCGGA 19
consensus_5946#0      TTCGGACCGGCCGCTCAGCTGCCGGGCGCAGTCGGCGGCTATCCGGGCGCGGTCGGAGGG 300
                                                                               *  

consensus_5946#1      AAAAGCAACTCGTTCCA-AGCGAGAAGTTGTGCCCGCACTCGTCGAAGCGAAAGAAAAGC 63
consensus_5946#2      CGCGTGGGCTCGTTCCA-AGCGAGAAGTTGTGCCCGCA-TCGTCGAAGCGAAAGAAAAGC 77
consensus_5946#0      TATCCGGGCGCGGTCGGCGGTTTGCCCATGTACCCGGG-CCGTCCCGGCCTTGGACAGCT 359
                              * ** **    *   *    *** ****    ****   **    ** *   

consensus_5946#1      GCCCG-GTGGTTTTT-CCCCACTTT-TTGCCTCAGTGCTTTTTC--GCGTGTGTCCTACC 118
consensus_5946#2      GCCCG-GTGGTTTTT-CCCCACTTT-TTGCCTCAGTGCTTTTTC--GCGTGTGTCCTACC 132
consensus_5946#0      GCCCGTGTACCCGCCGCTCTACCCGGCCGCACCGATGCTGCCCCCGACGCCGGCCATGCC 419
                      ***** **        * * **      **  *  ****    *   **   * * * **

consensus_5946#1      GACCG---AGACCAACA----ACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCA 171
consensus_5946#2      GACCG---AGACCTACCCCGTACCAGCGAGAAGATGGCGTACGAACCGAAGACGGCCCCA 189
consensus_5946#0      GTACGCTTACGGTCGCGCCATGCCGGCGATGATGCCAGTTGCGCCCCCACCGGCAGCCAA 479
                      *  **   *      *      ** ****  *       * **  ** *       ** *

consensus_5946#1      TTCGATCCCCGCTTCCCCAACCA-----GAACCAGACCAAGCACTGCTACCAGAGCTATC 226
consensus_5946#2      TTCGATCCCCGCTTCCCGAACCA-----GAACCAGACCAAGCACTGCTACCAGAGCTATC 244
consensus_5946#0      CCTGCGCACCGTTGCCTCGAACACCGACGTGCTGGGACGGTTGGCTGTGGCCGACCTGCC 539
                         *  * *** * **   * **     *  *  *  *         *  * ** **  *

consensus_5946#1      T-GGATTTCTA----CCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGG--TATGCAAG 279
consensus_5946#2      T-GGATTTCCA----CCGCTGCGAGAAGGTCAAGGGCGAGGGCGACCAGG--TATGCAAG 297
consensus_5946#0      GAGGATTTGCAGCAGNCGCGCCCAGGACATGCAGGGCCGCAGCGAGCAGGGCCTTACGAA 599
                        ******  *     ***  * ** *  *  *****    **** ****    * * * 

consensus_5946#1      TACTTCAAGAACGTCTTCTCGTCGA-TGTGCCCCAACTCGTGGGTTGAGAAGT----GGG 334
consensus_5946#2      TACTTCAAGAACGTCTTCTCGTCGA-TGTGCCCCAACTCGTGGGTTGAGAAGT----GGG 352
consensus_5946#0      CGCCTGCGAAACAGATGGCTGACGAACGGAACCGGAGTCCGTACTTGGGCAGTACAAGGC 659
                        * *    ***   *    * ***  *   **  * **     *** * ***    ** 

consensus_5946#1      ACAGCCAGCGCGAG-----GAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAA 389
consensus_5946#2      ACAGCCAGCGCGAG-----GAGGGCACCTTTGCCGGCCACATCTAAGGCATCCAAGCGAA 407
consensus_5946#0      GCTTGCAATGCGGCTTCCCAAGGGCTTGGATGGCACACCCGTCCTTGGAACCC--GCGGG 717
                       *   **  ***        *****     ** *   * * **   ** * **  ***  

consensus_5946#1      CCGGGAGAGGGA--------GAGAGAGAGGGAGCGCTGATGTTTGGTGCAACGAT--GTC 439
consensus_5946#2      CCGGGAGAGGGA--------GAGAGAGAGGGAGCGCTGATGTTTGGTGCAACGAT--GTC 457
consensus_5946#0      GCGNAAAAGGGGCTTCATCGGAGGCCAGGGAAAGGCTTACAGGGGGAACCGCCTTCGGGA 777
                       **  * ****         ***     ** *  *** *     **  *  *  *  *  

consensus_5946#1      GTCGCTCTCCCGGGATCCCTTAT-GCATACACCCTTTGCTAGTAAACCATCAGAAGTA-- 496
consensus_5946#2      GTCGCTCTCCCGGGATCCCTTTTTGCATACACCCTTTGCTAGTAAACCATCAGAAGTA-- 515
consensus_5946#0      GACGGGCACAGACGGGNTGGANCCGGGTATGGCATTGGCCAGACCNCAGCGAGGANCACA 837
                      * **  * *    *          *  **   * ** ** **    *    ** *  *  

consensus_5946#1      -ACAGAAATTTGAAATTCAA---CCTACTACTACTA---CTGCTA--CCACCAGCAATAC 547
consensus_5946#2      -ACAGAAATTTGAAATTCAA---CCTACTACTACTACTACTGCTA--CCACCAGCAATAC 569
consensus_5946#0      CACTTGGATTNGGTGTTTCAAGGCCCAAGGGTTTGAGCCACGTTAACCCAGCGGCAGGNC 897
                       **    *** *   **  *   ** *    *   *     * **  *** * ***   *

consensus_5946#1      AAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGT 607
consensus_5946#2      AAATCCGGAAGAAGAATGTTGTGTCGCGTGCGCAACGTTGCCATCCGTCACGATCCACGT 629
consensus_5946#0      GAAAGTGGCCGTTAAAAACCCGTTGGGATAACCCCCCGAGCGATTTGTCACAAAATAGGG 957
                       **   **  *   **       * *  *   *  *   ** **  ***** *   * * 

consensus_5946#1      GGCGCGGGCACGCGATGAAATTGAAATAAAACCATTATTAAACAGAGAGAAAAAAAAAAA 667
consensus_5946#2      GGCGCGGGCACGCGATGAAATTGAAATAAA------------------------------ 659
consensus_5946#0      NCCTCTCGAANACGGNGTTTTCAGGAACACATTNCGGNGANTTCNAAGATTGACACCCTA 1017
                        * *  * *  **  *   *    *  *                               

consensus_5946#1      AAAAAAAAAAAAAAAAAAGGCCACAGGTGCC----------------- 698
consensus_5946#2      ------------------------------------------------
consensus_5946#0      NNANNGGACGACAGCANTGTCGATTTGGGGAAAACANCGCGANAACCA 1065