Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5968 cluster # 5968       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5968#0 length = 1025 sequences # 5  
consensusID : consensus_5968#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1025
fasta sequence 
                              [CCGCCCACGCGTCCGGAGAAGTGCAGCAATAGGTGACCAGAGCTGCAATAGCTACTGGCAAGGGTAGTAGCAAAATAAAAGAAAAAGTCCATACAGAAGTAGTCGCCCGTAGGAAAAGTGCACCAGTATTGTGATACCCAACCTCTGTCCACCATTGAATAGTGCGAAGGGAGGGATACTCTCTTCCTGACCCCTGGGGACGTACTAAATCACCTCGTGCAGGTTCGGTGGTGCCACCGAAACTGCACTCCTTCCTGTGAGCAATCGTCCATCGGAACGGCACGGGTCAACTCCCTCCCCCTGCGATCTGGGAAAGGTTGGGAAGGAAAAAAAGTAAGGAAAAATGATATCGATTACGAAAACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATTTAAACCACGGACGTACGGAA-TTGTGTTGTGGTGCCCTGTTCATCCCACTGTGAGCTGTTTGCTGTGGGGAAAGTGCTTGCCCCTCGTTCCAACGTTTTTGTTTGACCAAGGCAAATCTTTGTGCCAGCTTCCCGGCCGTGCGAGCAGTGGATTTTTCTTCCCTGTTGTGACAGGAACAAACCTCGAGAAACGCAAAAGACGGTCAAGTTGCAGGCGGCACCCGCTCCCTCCCGAATGGACGTGATCGG-ACCGGACGGGCGTCCGACGGAAACGGGAACAAGCGGTAAACTTACCAATGGGAACGCAACGTCCGCGGAGGACTGCAGCACGGTGGCCGCGGTAGCGAGCGGTGCCGGAAGGCGCAAGAAGGCCAAGAGGAAAAATAAAGCTAAAAATAGCTCTACCGAGCCGGAGATGACGGGAGAAGCGAATGCGACAATCTCCTCCGCCACGCTAGACACGGCAAGGGCGCAACCATTGGAGGCGGTGCTAGCGAAGCAGGTGCAACAGCGGAATGCAGCGGTTGTAAATAGTAATTGTAGTAGTCATAGCAGTAACAACCACAGCAGTAGTCATAGCAACGGGCTGCCGGCCGAGGAGTCGCCATCGGCCGTCG]

[+] EMBL BM592446             [CCGCCCACGCGTCCGGAGAAGTGCAGCAATAGGTGACCAGAGCTGCAATAGCTACTGGCAAGGGTAGTAGCAAAATAAAAGAAAAAGTCCATACAGAAGTAGTCGCCCGTAGGAAAAGTGCACCAGTATTGTGATACCCAACCTCTGTCCACCATTGAATAGTGCGAAGGGAGGGATACTCTCTTCCTGACCCCTGGGGACGTACTAAATCACCTCGTGCAGGTTCGGTGGTGCCACCGAAACTGCACTCCTTCCTGTGAGCAATCGTCCATCGGAACGGCACGGGTCAACTCCCTCCCCCTGCGATCTGGGAAAGGTTGGGAAGGAAAAAAAGTAAGGAAAAATGATATCGATTACGAAAACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATTTAAACCACGGACGTACGGAA TTGTGTTGTGGTGCCCTGTTCATCCCACTGTGAGCTGTTTGCTGTGGGGAAAGTGCTTGCCCCTCGTTCCAACGTTTTTGTTTGACCAAGGCAAATCTTTGTGCCAGCTTCCCGGCCGTGCGAGCAGTGGATTTTTCTTCCCTGTTGTGACAGGAACAAACCTCGAGAAACGCAACAGACGATCAAGTTGCAGGCGGCACCCGCTCCCTCCCGAATGGACGTGATCGGAACCG                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM577439             [                      ccgGCAATAGGTGACCAGAGCTGCAATAGC ACTGGCAAGGGTAGTAGCAAAATAAAAGAAAAAGTCCACACAGAAGTAGTCGCCCGTAGGAAAAGTGCACCAGTATTGTGATACCCAACCTCTGCCCACCATTGATTAGTGCGAAGGGAGGGATACTCTCTTCCTGACCCCTGGGGACGTACTAAATCACCTCGTGCAGGTCCGGTGGTGCCACCGAAACTGCACTCCTTCCTGTGAGCAATCGTCCATCGGAACGGCACGGGTCAACTCCCTCCCCCTGCGATCTGGGAAAGGTTGGGAAGGAAAAAAAGTAAGG AAAATGATATCGATTACGAAAACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATCTGAACCACGGACGTACGGAA TTGTGTTGTGGTGCCCTGTTCATCCCACTGTGAGCCGTTTGCTGTGGGGAAAGTGCTTGCCCCTTGTTCCAACGTTTTTGTTTGACCAAGGCAAATCTTTGTGCCAGCTTCCCGGCCGTGCCAGCAGTGGATTTTTCTTCCCTGTTGTGACAGGAACAAACCTCGAGAAACGCAGAAGACGGTCAAGTTGCAGGCGGCACCCGCTCCCTCCCGAATGGACGTGATCGG ACCGGACGGGCGTCCGACGGAAACGGGAACAAGCGGTAAACTTACCAATG                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM586062             [                            ccgGGTGACCAGAGCTGCAATAGCTACTGGCAAGGGTAGTAGCAAAATAAAAGAAAAAGTCCATACAGAAGTAGTCGCCCGTAGGAAAAGTGCACCAGTATTGTGATACCCAACCTCTGTCCACCATTGAATAGTGCGAAGGGAGGGATACTCTCTTCCTGACCCCTGGGGACGTACTAAATCACCTCGTGCAGGTTCGGTGGTGCCACCGAAACTGCACTCCTTCCTGTGAGCAATCGTCCATCGGAACGGCACGGGTCAACTCCCTCCCCCTGCGATCTGGGAAAGGTTGGGAAGGAAAAAAAGTAAGGAAAAATGATATCGATTACGAAAACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATTTAAACCACGGACGTACGGAA TTGTGTTGTGGTGCCCTGTTCATCCCACTGTGAGCTGTTTGCTGTGGGGAAAGTGCTTGCCCCTCGTTCCAACGTTTTTGTTTGACCAAGGCAAATCTTTGTGCCAGCTTCCCGGCCGTGCGAGCAGTGGATTTTTCTTCCCTGTTGTGACAGGAACAAACCTCGAGAAACGCAAAAGACGGTCAAGTTGCAGGCGGCACCCGCTCCCTCCCGAATGGACGTGATCGG ACCGGACGGGCGTCCGACGGAAACGGCAACAAGCGGTAAACTTACCAATG                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM600602             [                             ccGGTGACCAGAGCTGCAATAGC ACTGGCAAGGGTAGTAGCAAAATAAAAGAAAAAGTCCACACAGAAGTAGTCGCCCGTAGGAAAAGTGCACCAGTATTGTGATACCCAACCTCTGCCCACCATTGATTAGTGCGAAGGGAGGGATACTCTCTTCCTGACCCCTGGGGACGTACTAAATCACCTCGTGCAGGTCCGGTGGTGCCACCGAAACTGCACTCCTTCCTGTGAGCAATCGTCCATCGGAACGGCACGGGTCAACTCCCTCCCCCTGCGATCTGGGAAAGGTTGGGAAGGAAAAAAAGTAAGG AAAATGATATCGATTACGAAAACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATCTGAACCACGGACGTACGGAATTTGTGTTGTGGTGCCCTGTTCATCCCACTGTGAGCCGTTTGCTGTGGGGAAAGTGCTTGCCCCTTGTTCCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM577185             [                                                                                                                                                                                                                                                                                                                                            AGTAAGGAAAAATGATATCGATTACGAAAACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATTTAAACCACGGACGTACGGAA TTGTGTTGTGGTGCCCTGTTCATCCCACTGTAAGCTGTTTGTTGTGGGGAAAGTGCTTGCTCCGCGTGCCAACGTTTTTGTTTGACCAAGGCAAATCTTTGTGCCAGCTTCCCGGCCGTGCGAGCAGTGGATTTTTCTTCCCTGTTGTGACAGGAACAAACCTCGAGAAACGCAGAAGACGGTCAAGTTGCAGGCGGCACCCGCTCCCTCCCGAATGGACGTGATCGG ACCGGACGGGCGTCCGACGGAAACGGGAACAAGCGGTAAACTTACCAATGGGAACGCAACGTCCGCGGAGGACTGCAGCACGGTGGCCGCGGTAGCGAGCGGTGCCGGAAGGCGCAAGAAGGCCAAGAGGAAAAATAAAGCTAAAAATAGCTCTACCGAGCCGGAGATGACGGGAGAAGCGAATGCGACAATCTCCTCCGCCACGCTAGACACGGCAAGGGCGCAACCATTGGAGGCGGTGCTAGCGAAGCAGGTGCAACAGCGGAATGCAGCGGTTGTAAATAGTAATTGTAGTAGTCATAGCAGTAACAACCACAGCAGTAGTCATAGCAACGGGCTGCCGGCCGAGGAGTCGCCATCGGCCGTCG]




>consensus_5968#0
CCGCCCACGCGTCCGGAGAAGTGCAGCAATAGGTGACCAGAGCTGCAATAGCTACTGGCA
AGGGTAGTAGCAAAATAAAAGAAAAAGTCCATACAGAAGTAGTCGCCCGTAGGAAAAGTG
CACCAGTATTGTGATACCCAACCTCTGTCCACCATTGAATAGTGCGAAGGGAGGGATACT
CTCTTCCTGACCCCTGGGGACGTACTAAATCACCTCGTGCAGGTTCGGTGGTGCCACCGA
AACTGCACTCCTTCCTGTGAGCAATCGTCCATCGGAACGGCACGGGTCAACTCCCTCCCC
CTGCGATCTGGGAAAGGTTGGGAAGGAAAAAAAGTAAGGAAAAATGATATCGATTACGAA
AACCGTATGATAGATCGCGGATCGTGGAAAAGCACCAAACTGTCCAATTTAAACCACGGA
CGTACGGAATTGTGTTGTGGTGCCCTGTTCATCCCACTGTGAGCTGTTTGCTGTGGGGAA
AGTGCTTGCCCCTCGTTCCAACGTTTTTGTTTGACCAAGGCAAATCTTTGTGCCAGCTTC
CCGGCCGTGCGAGCAGTGGATTTTTCTTCCCTGTTGTGACAGGAACAAACCTCGAGAAAC
GCAAAAGACGGTCAAGTTGCAGGCGGCACCCGCTCCCTCCCGAATGGACGTGATCGGACC
GGACGGGCGTCCGACGGAAACGGGAACAAGCGGTAAACTTACCAATGGGAACGCAACGTC
CGCGGAGGACTGCAGCACGGTGGCCGCGGTAGCGAGCGGTGCCGGAAGGCGCAAGAAGGC
CAAGAGGAAAAATAAAGCTAAAAATAGCTCTACCGAGCCGGAGATGACGGGAGAAGCGAA
TGCGACAATCTCCTCCGCCACGCTAGACACGGCAAGGGCGCAACCATTGGAGGCGGTGCT
AGCGAAGCAGGTGCAACAGCGGAATGCAGCGGTTGTAAATAGTAATTGTAGTAGTCATAG
CAGTAACAACCACAGCAGTAGTCATAGCAACGGGCTGCCGGCCGAGGAGTCGCCATCGGC
CGTCG

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)