cluster # 597

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Anopheles gambiae
cluster # 597 cluster # 597 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_597#0 length = 577 sequences # 1

consensus_597#1 length = 455 sequences # 1

consensusID : consensus_597#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 577
fasta sequence

                              [TGGATAAGTCGCCTGTAAACCGAGAAGAGCCAGCACAAGAGTCGTAGTAATATCTAGCATGGGAAATTAACGGAAAAAAAACTATTAAAAAAAACATAAGGAAACTTATTACACATACAATGCTAGCCAATTGTACGAAAGCGATAAGTATCGGGCAATGAAGGAGGGAGGGGAAAACAAAACATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGCATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAGTTTTGAAGAGCAGAAAAACAGGGAACAGGGAAAAGACACAGACAGGCCAGGGCCCAACACAGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACGAAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTTGTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTA]

[+] EMBL BX614340             [TGGATAAGTCGCCTGTAAACCGAGAAGAGCCAGCACAAGAGTCGTAGTAATATCTAGCATGGGAAATTAACGGAAAAAAAACTATTAAAAAAAACATAAGGAAACTTATTACACATACAATGCTAGCCAATTGTACGAAAGCGATAAGTATCGGGCAATGAAGGAGGGAGGGGAAAACAAAACATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGCATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAGTTTTGAAGAGCAGAAAAACAGGGAACAGGGAAAAGACACAGACAGGCCAGGGCCCAACACAGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACGAAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTTGTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTA]




>consensus_597#0
TGGATAAGTCGCCTGTAAACCGAGAAGAGCCAGCACAAGAGTCGTAGTAATATCTAGCAT
GGGAAATTAACGGAAAAAAAACTATTAAAAAAAACATAAGGAAACTTATTACACATACAA
TGCTAGCCAATTGTACGAAAGCGATAAGTATCGGGCAATGAAGGAGGGAGGGGAAAACAA
AACATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGCA
TGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAGT
TTTGAAGAGCAGAAAAACAGGGAACAGGGAAAAGACACAGACAGGCCAGGGCCCAACACA
GAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACGA
AATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTTG
TACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGAATGCTGTACGAC
ATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTA

consensusID : consensus_597#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 455
fasta sequence

                              [ATGCTAGCCAATTGTACGAAAGCGATAAGTATCGGACAATGAAGGAGGGAGGGGAAAACAAAAGCATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGCATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAGTTTTGAAGAGCAGAAAAACAGGGAACAGAGGAAAGACACAGACAGGCCAGGGCCCAACACAGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACGAAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTTGTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGTGCACCCGTGTAATGGATATACAACTTCGGAAGGGTAAACAATAAA]

[-] EMBL BX616071             [ATGCTAGCCAATTGTACGAAAGCGATAAGTATCGGACAATGAAGGAGGGAGGGGAAAACAAAAGCATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGCATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAGTTTTGAAGAGCAGAAAAACAGGGAACAGAGGAAAGACACAGACAGGCCAGGGCCCAACACAGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACGAAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTTGTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGTGCACCCGTGTAATGGATATACAACTTCGGAAGGGTAAACAATAAA]




>consensus_597#1
ATGCTAGCCAATTGTACGAAAGCGATAAGTATCGGACAATGAAGGAGGGAGGGGAAAACA
AAAGCATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAG
CATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAA
GTTTTGAAGAGCAGAAAAACAGGGAACAGAGGAAAGACACAGACAGGCCAGGGCCCAACA
CAGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTAC
GAAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGT
TGTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGTGCACCCGTGT
AATGGATATACAACTTCGGAAGGGTAAACAATAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_597#0      TGGATAAGTCGCCTGTAAACCGAGAAGAGCCAGCACAAGAGTCGTAGTAATATCTAGCAT 60
consensus_597#1      ------------------------------------------------------------
                                                                                 

consensus_597#0      GGGAAATTAACGGAAAAAAAACTATTAAAAAAAACATAAGGAAACTTATTACACATACAA 120
consensus_597#1      -----------------------------------------------------------A 1
                                                                                *

consensus_597#0      TGCTAGCCAATTGTACGAAAGCGATAAGTATCGGGCAATGAAGGAGGGAGGGGAAAACAA 180
consensus_597#1      TGCTAGCCAATTGTACGAAAGCGATAAGTATCGGACAATGAAGGAGGGAGGGGAAAACAA 61
                     ********************************** *************************

consensus_597#0      AA-CATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGC 239
consensus_597#1      AAGCATGGAAATAGAAAACATAAAACAGTGTAACGAAATCGAAGATGAAAACAGGAAAGC 121
                     ** *********************************************************

consensus_597#0      ATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAG 299
consensus_597#1      ATGGGGAAACGAAGATTAGTTCATCGAAAGAAACGTACGTGAACCGCGTTACGGAACAAG 181
                     ************************************************************

consensus_597#0      TTTTGAAGAGCAGAAAAACAGGGAACAGGGAAAAGACACAGACAGGCCAGGGCCCAACAC 359
consensus_597#1      TTTTGAAGAGCAGAAAAACAGGGAACAGAGGAAAGACACAGACAGGCCAGGGCCCAACAC 241
                     **************************** * *****************************

consensus_597#0      AGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACG 419
consensus_597#1      AGAGAATGAATGCTGTACGACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTACG 301
                     ************************************************************

consensus_597#0      AAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTT 479
consensus_597#1      AAATGTGGAATGCAAGAAAACCAGAAAGCGCAATCGTGCATGTGTCGTGCGTGGTGCGTT 361
                     ************************************************************

consensus_597#0      GTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGAATGCT-GTACG 538
consensus_597#1      GTACGGTGTTGGTGATAAAGCAGTAAAGAACTTTACACCCTGAAAATGTGCACCCGTGTA 421
                     ************************************************    *  **   

consensus_597#0      ACATACCCACTTTATGAGAGAAAATGAGAATGAGTTGTA 577
consensus_597#1      ATGGATATACAACTTCGGAAGGGTAAACAATAAA----- 455
                     *   *   **    *  **       * *** *