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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1383 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGCGGCACGAGCGGTGCATTTTTTCTATCCTCAAAACGCAAAACATTCTTTTTATTGAGCAGTGAATCTGGTTGGTGCTAAATCGAGTGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAAGATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATGTCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGAACCAGCGTGCATGCGTATGTGTGTGTGGCACAATGTTTACAACGGTTTGCGTGTCTATATCTGTAACGCATTCCGCACTGGCTGGCTGGCGATGGCATCATGATCGATGAATCGATCATTTCACATCGCAATGTATGAGCCCCATTCTCGTTCCTGTTTGTACAGATAGACGGGACACACAGGGATCATAGTAAACTGCGCATTGCTTCGTCACACAATAAGCACATTCAGCAAACGACCACGCACGCAATAAATGCCGCGATGCCATGGACGATCGTCGTTGATCGCCCGCCCCTCTGGAGTGCATCGAAAAAATCCCATTTTTCTGCTACTCGCATAGCACCGCGCGCCGCGCACAACAACCGTTTTCGTTTTCTGTTTCGCGCAAAATAACATAACATAAATCATCGTTCTAGTTGATTCGCGATTGAGCATATCGAGTTATGCAAATGAGATAGCATTAGTTGTAGTAGAAAAGAAGTGAGCTATCGATCAGAGATGCTCCGCCAGGGCCAGGAAAACTTCCCTACCGGGTACCGGGAGAAAGACGCACAAGAGCGATAGTGGGAAATT--AAAAAAAAATGCAGAAGAATATGGACTGACTATACATCTCCCGCTAGACCACAGCAAGGTACGTCAGAGCAGAATAAAAGTGAAAGCAATTAGGAGCCGTTGCTTACGCACATGTAACATCCCC----CCGCCCATCACCCCACATTCTGACCTTACGAGTTTTCCACTCTGACCAGAACCAGAGACATTGAAACACCCTGCGAAGTGTGCGTACAAAATTTGTGAAAAAGAACCAGTGGGTTACTACCCCTCGCCTTTGGCTGGAATCTTTAATTCTGAGTTTCCTTTCGTTTTACCTTTTGAGGGAATATAAAATGCATATTGAGCTGTATGGGCAGGACTGTAGCAAAAAGTATTTGTAGTAGTGCATTAATTCTCGTTTTTAAATAGTGATATATAAACACCGTTTTTTGTGACAATAATGAAGGCAAGTGAGGGCTAACGACATGGGTAGAAAGTCCTAGCTATAGTGTATGGATTGTTCTTTGTAGCAGCATTGAGCAAAAAAAAGGATTGTGCCTCA]
[+] EMBL BM583863 [CCGCCCACGCGTCCGCCCACGCGTCCGGCGGCACGAGCGGTGCATTTTTTCTATCCTCAAAACGCAAAACATTCTTTTTATTGAGCAGTGAATCTGGTTGGTGCTAAATCGAGTGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAAGATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATGTCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGAACCAGCGTGCATGCGTATGTGTGTGTGGCACAATGTTTACAACGGTTTGCGTGTCTATATCTGTAACGCATTCCGCACTGGCTGGCTGGCGATGGCATCATGATCGATGAATCGATCATTTCACATCGCAATGTATGAGCCCCATTCTCGTTCCTGTTTGTACAGATAGACGGGACACACAGGGATCATAGTAAACTGCGCATTGCTTCGTCACACAATAAGCACATTCAGCAAACGACCACGCACGCAATAAATGCCGCGATGCCATGGACGATCGTCGTTGATCGCCC ]
[+] EMBL BM650280 [ ccgcggacgCGTGGGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAAGATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATGTCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGAACCAGCGTGCATGCGTATGTGTGTGTGGCACAATGTTTACAACGGTTTGCGTGTCTATATCTGTAACGCATTCCGCACTGGCTGGCTGGCGCTGGCATCATGATCGATGAATCGATCATTTCACATCGCAATGTATGAGCCCCATTCTCGTTCCTGTTTGTACAGATAGACGGGACACACAGGGATCATAGTAAACTGCGCATTGCTTCGTCACACAATAAGCACATTCAGCAAACGACCACGCACGCAATAAATGCCGCGATGCCATGGACGATCGTCGTTGATCGCCCGCCCCTCTGGAGTGCATCGAAAAAATCCCATTTTTCTGCTACTCGCATAGCACCGCGCGCCGCGCACAACAACCGTTTTCGTTTTCTGTTTCGCGCAAAATAACATAACATAAATCATCGTTCTAGTTGATTCGCGATTGAGCATATCGAGTTATGCAAATGAGATAGCATTAGTTGTAGTAGAAAAGAAGTGAGCTATC ]
[+] EMBL BM619630 [ ccgGACGGGACACACAGGGATCATAGTAAACTGCGCATTGCTTCGTCACACAATAAGTACATTCAGCAAACGACCACGCACGCAATAAATGCCGCGATGCCATGGACGATCGTCGTTGATCGCCCGCCCCTCTGGAGTGCATCGAAAAAATCCCATTTTTCTGCTACTCAAATAGCACCGCGCGCCGCGCACAACAACCGTTTTCGTTTTCTGTTTCGCGCAAAATAACATAACATAAATCATCGTTCTAGTTGATTCGCGATTGAGCATATCGAGGTATGCAAATGAGATAGCATTAGTTGTAGTAGAAAAGGGGTGAGCTATCGATCAGAGATGCTCCGCCAGGGCCAGGAAAACTTCCCTACCGGGTACCGGGAGAAAGACGCACAAGAGCGATAGTGGGAAATTTAAAAAAAAAATGCAGAAGAATATGGACTGACTATACATCTCCCGCTAGACCACAGCAAGGTACGTCAGAGCAGAATAAAAGTGAAAGCAATTAGGAGCCGTTGCTTACGCACATGTAACATCCCC CCGCCCATCACCCCACATTCTGACCTTACGAGTTTTCCACTCTGACCAGAACCAGAG ]
[+] EMBL BM627190 [ ccgGCAAAATAACATAACATAAATCATCGTTCTAGTTGATTCGCGATTGAGCATATCGAGTTATGCAAATGAGATAGCATTAGTTGTAGTAGAAAAGAAGTGAGCTATCGATCAGAGATGCTCCGCCAGGGCCAGGAAAACTTCCCTACCGGGTACCGGGAGAAAGACGCACAAGCGCGATAGTGGGAAATT AAAAAAAAATGCAGAAGAATATGGACTGACTATACATCTCCCGCTAGACCACAGGAAGGTACGTCAGAGCAGAATAAAAGTGAAAGCAATTAGGAGCCGTTGCTTACCAACATGTAACATCCCCCCCTCCCCCCATCACCCCACATTCTGACCTTACGAGTTTTCCACTCTGACAAGAACCAGAGACATTGAAACACCCTGCGAAGTGTGCGTACAAAATTTGTGAAAAAGAACCAGTGGGTTACTACCCCTCGCCTTTGGCTGGAATCTTTAATTCTGAGTTTCCTTTCGTTTTACCTTTTGAGGGAATATAAAATGCATATTGAGCTGTATGGGCAGGACTGTAGCAAAAAGTATTTGTAGTAGTGCATTAATTCTCGTTTTTAAATAGTGATATATAAACACCGTTTTTTGTGACAATAATGAAGGCAAGTGAGGGCTAACGACATGGGTAGAAAGTCCTAGCTATAGTGTATGGATTGTTCTTTGTAGCAGCATTGAGCAAAAAAAAGGATTGTGCCTCA]
consensusID : consensus_6014#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence
[CCCGCCCCTCTGGAGTGCATCGAAAAAAAAAAACGTGTGGTGAAACAGAGGGGCAATTTTGATTTTTTAAACAAACACGATAAAAAACGCCATCTGTTCTGGCCCGGTTCTCAGGAAGATTTTTTCGTTTTGGTCCGTAGTTCCGTAGACACTCGGTGCGGCACGAGCGGTGCATTTTTTCTATCCTCAAAACGCAAAACATTCTTTTTATTGAGCAGTGAATCTGGTTGGTGCTAAATCGAGTGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAAGATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATGTCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGAACCAGCGTGTGTCGGATCGGATTTGTACATTTTTAAATGAA]
[+] EMBL BX617153 [CCCGCCCCTCTGGAGTGCATCGAAAAAAAAAAACGTGTGGTGAAACAGAGGGGCAATTTTGATTTTTTAAACAAACACGATAAAAAACGCCATCTGTTCTGGCCCGGTTCTCAGGAAGATTTTTTCGTTTTGGTCCGTAGTTCCGTAGACACTCGGTGCGGCACGAGCGGTGCATTTTTTCTATCCTCAAAACGCAAAACATTCTTTTTATTGAGCAGTGAATCTGGTTGGTGCTAAATCGAGTGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAAGATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATGTCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGAACCAGCGTGTGTCGGATCGGATTTGTACATTTTTAAATGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6014#0 ------------------------------------------------------------
consensus_6014#1 CCCGCCCCTCTGGAGTGCATCGAAAAAAAAAAACGTGTGGTGAAACAGAGGGGCAATTTT 60
consensus_6014#0 ------------------------------------------------------------
consensus_6014#1 GATTTTTTAAACAAACACGATAAAAAACGCCATCTGTTCTGGCCCGGTTCTCAGGAAGAT 120
consensus_6014#0 ----------CCGCCCACGCGTCCGCCCACGCGTCCGGCGGCACGAGCGGTGCATTTTTT 50
consensus_6014#1 TTTTTCGTTTTGGTCCGTAGTTCCGTAGACACTCGGTGCGGCACGAGCGGTGCATTTTTT 180
* ** **** ** * ***********************
consensus_6014#0 CTATCCTCAAAACGCAAAACATTCTTTTTATTGAGCAGTGAATCTGGTTGGTGCTAAATC 110
consensus_6014#1 CTATCCTCAAAACGCAAAACATTCTTTTTATTGAGCAGTGAATCTGGTTGGTGCTAAATC 240
************************************************************
consensus_6014#0 GAGTGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAA 170
consensus_6014#1 GAGTGATTTCCTGCTGCGTGACTTATGTCCTGCGTCTGTCGCTTTTTGTTGTTATTCCAA 300
************************************************************
consensus_6014#0 GATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATG 230
consensus_6014#1 GATTTTTACGCAAGCTTACGTGAGTGGGTGGATGGAATTTCGTGTGCAGCTTCTTGTATG 360
************************************************************
consensus_6014#0 TCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGA 290
consensus_6014#1 TCCGGTGTGAAGATTTAATTTTAATTTCTCGTTTTGTTTTGCATACCGGATCCAACATGA 420
************************************************************
consensus_6014#0 ACCAGCGTGCATGCGTATGTGTGTGTGGCACAATGTTTACAACGGTTTGCGTGTCTATAT 350
consensus_6014#1 ACCAGCGTGTGTCGGATCGGATTTGTAC----ATTTTTA-AATGAA-------------- 461
********* * * * * *** ** **** ** *
consensus_6014#0 CTGTAACGCATTCCGCACTGGCTGGCTGGCGATGGCATCATGATCGATGAATCGATCATT 410
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 TCACATCGCAATGTATGAGCCCCATTCTCGTTCCTGTTTGTACAGATAGACGGGACACAC 470
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 AGGGATCATAGTAAACTGCGCATTGCTTCGTCACACAATAAGCACATTCAGCAAACGACC 530
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 ACGCACGCAATAAATGCCGCGATGCCATGGACGATCGTCGTTGATCGCCCGCCCCTCTGG 590
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 AGTGCATCGAAAAAATCCCATTTTTCTGCTACTCGCATAGCACCGCGCGCCGCGCACAAC 650
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 AACCGTTTTCGTTTTCTGTTTCGCGCAAAATAACATAACATAAATCATCGTTCTAGTTGA 710
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 TTCGCGATTGAGCATATCGAGTTATGCAAATGAGATAGCATTAGTTGTAGTAGAAAAGAA 770
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 GTGAGCTATCGATCAGAGATGCTCCGCCAGGGCCAGGAAAACTTCCCTACCGGGTACCGG 830
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 GAGAAAGACGCACAAGAGCGATAGTGGGAAATTAAAAAAAAATGCAGAAGAATATGGACT 890
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 GACTATACATCTCCCGCTAGACCACAGCAAGGTACGTCAGAGCAGAATAAAAGTGAAAGC 950
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 AATTAGGAGCCGTTGCTTACGCACATGTAACATCCCCCCGCCCATCACCCCACATTCTGA 1010
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 CCTTACGAGTTTTCCACTCTGACCAGAACCAGAGACATTGAAACACCCTGCGAAGTGTGC 1070
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 GTACAAAATTTGTGAAAAAGAACCAGTGGGTTACTACCCCTCGCCTTTGGCTGGAATCTT 1130
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 TAATTCTGAGTTTCCTTTCGTTTTACCTTTTGAGGGAATATAAAATGCATATTGAGCTGT 1190
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 ATGGGCAGGACTGTAGCAAAAAGTATTTGTAGTAGTGCATTAATTCTCGTTTTTAAATAG 1250
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 TGATATATAAACACCGTTTTTTGTGACAATAATGAAGGCAAGTGAGGGCTAACGACATGG 1310
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 GTAGAAAGTCCTAGCTATAGTGTATGGATTGTTCTTTGTAGCAGCATTGAGCAAAAAAAA 1370
consensus_6014#1 ------------------------------------------------------------
consensus_6014#0 GGATTGTGCCTCA 1383
consensus_6014#1 -------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||