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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6397#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1098 fasta sequence
[GAGTTATTGCGCTTNATAGGACAATGAAGTTTTCGAACTACTGTAACTACCGTAACCTTCCTCTGAGGAGCATTGTATACAGAAATTTCTTCGTTTTTTTTTAACCGGCAGACAATCGTCGGACTCAGTAATCAATCATCATTTAGTGAGCAAAAGTATTACGCAAACAACTTTGAACAATCGAAACAATTCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCAGCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAAGAAACAGATAGATTAAAGGTAGGTGAAAGAGAAGTATCGATGATGAAGAAGAAGTTAGAAAGGCAGAGGCGATGAGCCGCCTTGCTATTCCGGAACATACATCTCCGAGGAGCGCAAAACAAGTAGAGTGAATGCATTTTATGGTTTTGTTTTTATCACCACACACTATTTAATTGTAAGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAGCACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAAGGAGCCGCCCAGGGCGAACAAAGCAAAGCTTAGGAGCTTTCGTGTTTGAGGGCCATATTGAAGTGCACGTGTTGGTTTCATTTAGCCGTAAAAGGATTCTCCTCCATTCCTAGCCCCGTTTATGTATCATAAATATATATGAAAAGGAATTACCTACATACTTGCATTCATAGGCTCTGCATTTTTCTCTCATTTCTGCAGTTTGTTTGAAATTCTTCGTTACTCGAAACCGTTATTTAGGG--CAGTGTTGCAGTGAAGTTGATCTGGATTATTAGTTACGTACGAGCAGAGTTTAAATCTTGTACTCGTTTTAAAAGCTTAATGTAAAAGGGAGTTTTGCTTTTAGTTTTGGTTTAGATCTTAATCTAACGAAAGAGAAAGA-TAGTCGTGCACTGAACCC-AGCGAAA-GAGAAAGAGAGGAAAAGCAAAAAGAGAATGCATTTTTAACTAATGTGGTGTGTGTTCGAATTTGTCTAACAAAATTTTCGATATGAATAAATGT]
[+] EMBL BX626195 [GAGTTATTGCGCTTNATAGGACAATGAAGTTTTCGAACTACTGTAACTACCGTAACCTTCCTCTGAGGAGCATTGTATACAGAAATTTCTTCGTTTTTTTTTAACCGGCAGACAATCGTCGGACTCAGTAATCAATCATCATTTAGTGAGCAAAAGTATTACGCAAACAACTTTGAACAATCGAAACAATTCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCAGCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAAGAAACAGATAGATTAAAGGTAGGTGAAAGAGAAGTATCGATGATGAAGAAGAAGTTAGAAAGGCAGAGGCGATGAGCCGCCTTGCTATTCCGGAACATACATCTCCGAGGAGCGCAAAACAAGTAGAGTGAATGCATTTTATGGTTTTGTTTTTATCACCACACACTATTTAATTGTAAGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAGCACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAAGGAGCCGCCCAGGGCGAACAAAGCAAAGCTTAGGAGCTTTCGTGTTTG ]
[+] EMBL BX624529 [ TCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCAGCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAAGAAACAGATAGATTAAAGGTAGGTGAAAGAGAAGTATCGATGATGAAGAAGAAGTTAGAAAGGCAGAGGCGATGAGCCGCCTTGCTATTCCGGAACATACATCTCCGAGGAGCGCAAAACAAGTAGAGTGAATGCATTTTATGGTTTTGTTTTTATCACCACACACTATTTAATTGTAAGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAGCACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAAGGAGCCGCCCAGGGCGAACAAAGCAAAGCTTAGGAGCTTTCGTGTTTGAGGGCCATATTGAAGTGCACGTGTTGGTTTCATTTAGCCGTAAAAGGATTCTCCTCCATTCCTAGCCCCGTTTATGTATCATAAATATATATGAAAAGGAATTACCTACATACTTGCATTCATAGGCTCTGCATTTTTCTC ]
[+] EMBL BX615686 [ AACATGTCTGCGAGACAGCACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAAGGAGCCGCCCAGGGCGAACAAAGCAAAGCTTAGGAGCTTTCGTATTTGAGGGCCATATTGAAGTGCACGTGTTGGTTTCATTTAGCCGTAAAAGGATTCTCCTCCATTCCTAGCCCCGTTTATGTATCATAAATATATATGAAAAGGAATTACCTACATACTTGCATTCATAGGCTCTGCATTTTTCTCTCATTTCTGCAGTTTGTTTGAAATTCTTCGTTACTCGAAACCGTTATTTAGGGCACAGTGTTGCAGTGAAGTTGATCTGGATTATTAGTTACGTACGAGCAGAGTTTAAATCTTGTACTCGTTTTAAAAGCTTAATGTAAAAGGGAGTTTTGCTTTTAGTTTTGGTTTAGATCTTAATCTAACGAAAGAGAAAGA TAGTCGTGCACTGAACCC AGCGAAA GAGAAAGAGAGGAAAAGCAAAAAGAGAATGCATTTTTAACTAATGTGGTGTGTGTTCGAATTTGTCTAACAAAATTTTCGATATGAATAAATGT]
[-] EMBL CNS08J1Y [ acTATATATGAAAAGGAATTACCTACATACTTGCATTCATAGGCTCTGCATTTTTCTCTCATTTCTGCAGTTTGTTTGAAATTCTTCGTTACTCGAAACCGTTATTTAGGG CAGTGTTGCAGTGAAGTTGATCTGGATTATTAGTTACGTACGAGCAGAGTTTAAATCTTGTACTCGTTTTACAAGCTTAATGTAAAAGGGAGTTTTGCTTTTAGTTTTGGTTTAGATCTTAATCTAACGAAAGAGAAAGACAAGTCGTGCACTGAACCCAAGCGAAAGGAGAAAGAGAGGAAAAGCAAA ]
consensusID : consensus_6397#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 643 fasta sequence
[CAGTGTTACATNTCTTGATGTTGTGAAGCGGCCGCAACATGCCTGGTCNTTTTTTTATTTTTTACCGGCAGACAATCGTCGGACTCAGTAATCAATCATCATTTAGTGAGCAAAAGTATTACGCAAACAACTTTGAACAATCGAAACAATTCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCAGCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAAGAAGCAGATAGATTAAAGGTAGGTGACAGAGAAGTATCGATGATGAAGAAGAAGTTAGAAAGGCAGAGGCGATGAGCCGCGTTGCAATTCCGGAACATACATCTCCGAGGAGCGCAAAACAAGTTGAGTGAATGCATTTTATGGTTTTGTTTTGTATCACCACGACACTATTTAATTGTAAGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAGCACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAAGGAGCCGCCCAGGGCGAACAAAGCAAAGGCTTAGGAGCTTTCGGTATTTGAGGGCCATATTGAAGTGCACGTGTNGGTTTCATT]
[+] EMBL BX466333 [CAGTGTTACATNTCTTGATGTTGTGAAGCGGCCGCAACATGCCTGGTCNTTTTTTTATTTTTTACCGGCAGACAATCGTCGGACTCAGTAATCAATCATCATTTAGTGAGCAAAAGTATTACGCAAACAACTTTGAACAATCGAAACAATTCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCAGCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAAGAAGCAGATAGATTAAAGGTAGGTGACAGAGAAGTATCGATGATGAAGAAGAAGTTAGAAAGGCAGAGGCGATGAGCCGCGTTGCAATTCCGGAACATACATCTCCGAGGAGCGCAAAACAAGTTGAGTGAATGCATTTTATGGTTTTGTTTTGTATCACCACGACACTATTTAATTGTAAGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAGCACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAAGGAGCCGCCCAGGGCGAACAAAGCAAAGGCTTAGGAGCTTTCGGTATTTGAGGGCCATATTGAAGTGCACGTGTNGGTTTCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6397#0 GAGTTATTGCGCTTNATAGGACAATGAAGTTTTCGAACTACTGTAAC-TACCGTAACCTT 59
consensus_6397#1 --------------------------------------CAGTGTTACATNTCTTGATGTT 22
* *** ** * * * * **
consensus_6397#0 CCTCTGAGGAGCATTGTATACAGAAATTTCTTCGTTTTTTTTTAACCGGCAGACAATCGT 119
consensus_6397#1 G---TGAAGCGGCCGCAACATGCCTGGTCNTTTTTTTATTTTTTACCGGCAGACAATCGT 79
*** * * * * * ** *** ***** ****************
consensus_6397#0 CGGACTCAGTAATCAATCATCATTTAGTGAGCAAAAGTATTACGCAAACAACTTTGAACA 179
consensus_6397#1 CGGACTCAGTAATCAATCATCATTTAGTGAGCAAAAGTATTACGCAAACAACTTTGAACA 139
************************************************************
consensus_6397#0 ATCGAAACAATTCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCA 239
consensus_6397#1 ATCGAAACAATTCCTATTGTGAAGGAGAAGAAGCGGAGGGAGAGGTGATACATTTTCCCA 199
************************************************************
consensus_6397#0 GCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAA 299
consensus_6397#1 GCACGAGGATTTACTTGTCAAACACACAATCCTCGCCTTTAGAAATAATAATAAAAAAAA 259
************************************************************
consensus_6397#0 GAAACAGATAGATTAAAGGTAGGTGAAAGAGAAGTATCGATGATGAAGAAGAAGTTAGAA 359
consensus_6397#1 GAAGCAGATAGATTAAAGGTAGGTGACAGAGAAGTATCGATGATGAAGAAGAAGTTAGAA 319
*** ********************** *********************************
consensus_6397#0 AGGCAGAGGCGATGAGCCGCCTTGCTATTCCGGAACATACATCTCCGAGGAGCGCAAAAC 419
consensus_6397#1 AGGCAGAGGCGATGAGCCGCGTTGCAATTCCGGAACATACATCTCCGAGGAGCGCAAAAC 379
******************** **** **********************************
consensus_6397#0 AAGTAGAGTGAATGCATTTTATGGTTTTGTTTT-TATCACCAC-ACACTATTTAATTGTA 477
consensus_6397#1 AAGTTGAGTGAATGCATTTTATGGTTTTGTTTTGTATCACCACGACACTATTTAATTGTA 439
**** **************************** ********* ****************
consensus_6397#0 AGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAG 537
consensus_6397#1 AGCTGTGTGGTTAGACAGCCGAGTGTGCACCGATTGCAGGCGAACATGTCTGCGAGACAG 499
************************************************************
consensus_6397#0 CACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAA 597
consensus_6397#1 CACCGTATATGAAGGTATCTGAAATGCACTTGCACGTTGGAGAGCTGCAACTGAGCGTAA 559
************************************************************
consensus_6397#0 GGAGCCGCCCAGGGCGAACAAAGCAAAG-CTTAGGAGCTTTCG-TGTTTGAGGGCCATAT 655
consensus_6397#1 GGAGCCGCCCAGGGCGAACAAAGCAAAGGCTTAGGAGCTTTCGGTATTTGAGGGCCATAT 619
**************************** ************** * **************
consensus_6397#0 TGAAGTGCACGTGTTGGTTTCATTTAGCCGTAAAAGGATTCTCCTCCATTCCTAGCCCCG 715
consensus_6397#1 TGAAGTGCACGTGTNGGTTTCATT------------------------------------ 643
************** *********
consensus_6397#0 TTTATGTATCATAAATATATATGAAAAGGAATTACCTACATACTTGCATTCATAGGCTCT 775
consensus_6397#1 ------------------------------------------------------------
consensus_6397#0 GCATTTTTCTCTCATTTCTGCAGTTTGTTTGAAATTCTTCGTTACTCGAAACCGTTATTT 835
consensus_6397#1 ------------------------------------------------------------
consensus_6397#0 AGGGCAGTGTTGCAGTGAAGTTGATCTGGATTATTAGTTACGTACGAGCAGAGTTTAAAT 895
consensus_6397#1 ------------------------------------------------------------
consensus_6397#0 CTTGTACTCGTTTTAAAAGCTTAATGTAAAAGGGAGTTTTGCTTTTAGTTTTGGTTTAGA 955
consensus_6397#1 ------------------------------------------------------------
consensus_6397#0 TCTTAATCTAACGAAAGAGAAAGATAGTCGTGCACTGAACCCAGCGAAAGAGAAAGAGAG 1015
consensus_6397#1 ------------------------------------------------------------
consensus_6397#0 GAAAAGCAAAAAGAGAATGCATTTTTAACTAATGTGGTGTGTGTTCGAATTTGTCTAACA 1075
consensus_6397#1 ------------------------------------------------------------
consensus_6397#0 AAATTTTCGATATGAATAAATGT 1098
consensus_6397#1 -----------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||