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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1352 fasta sequence
[CCGCACAACCGAAACATTGCATCTACGTTCGATTCTGTTTGCACACCGATGTAGCCAGAATAATGCTAATCACAGTTTTCCCTTCCATTGTGCAAGCTACAGTAGTTAAAGCTAGTTAAGCGAACGTGCTGCTAACAATTGTTCGGCTCCAGATCACCCAAAAACACAGCAAATCAGTTTACGAGGAAGCCACGAGGACACACCGCATCGTTCAAAGCACTCAAAAGGGCGTGTGTAGCAAAACAAAAAGGCAATGAGCAATCGGCGGAAGAAAACCGATCGGCATGATCACGAAACGCTTCTCCCGCCTGTCGATGCCGACGAGGAAAAGCACGAAAAAAGTGACCTGCGGGGTGACTGGGGCAACATTGCCATCCTGTTCTTTCTCTACCTGCTGCAAGGCATTCCGATTGGACTGGCCTCGGCCATACCGATGTTGCTACAGAACCGTGGAGCAAGCTACAAACAGCAGGCTGAATTCAGTTTCGCTCACTGGCCGTTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCTGTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTCCGACGCAGTACCTGATCGGCATATTTATGCTGATACTTTCGCTGCACGTGAACCGTTGGCTGGGCGCGGAAACCACCGACACTGGTGGCGATGATCATGCCACCGAGCAAACCAGCACACTCAACATTCCGCTACTGACGGTCATCTTTTTCATGCTAAACTTCCTCGCCGCCACGCAGGACATTGCCGTCGATGGGTGGGCTTTAACGATGCTGAAGCGCTGCAACGTTGGGCACGCATCGACCTGCAACAGCGTCGGCCAGACGGCGGGCTATTTCCTCGGGTACGTCGCCTTCATGGCACTGGAATCGGCCGAATTCTGCAACAGCTATCTACGTGCCGAACCCGCCCCGGAAGGGTTGGTCAATCTGTCCGGTTACCTGTGGTTCTGGGGGTTGGTGTTTTTGGTTACCACCACGCTGGTTGCGCTTGGCAAGCGGGAACTATCGCCCAGCCTCGATCGGGGCCACGAGGAGCACCTGGAGCTGGACATCAAGCAAACCTACCGCTTGCTGGTGGACATTATGAAGACGAAACCGATTCTGACGCTGGTAGCAATACAGCTGACAGCCCAAGGCAGGGTTTGCTGCCTGCGACGCGGTCACCTCGCTGAAACTGATCGACGCAGGCGTACCGAAGGATAAACTGGCCCTGCTGGTTGTACCGCTCGTTCCACTGCAGATTGTACTACCGTTGGCAATCAGCAAATACACCGCTGGAACGCGACCGATGGAAGTGTACCTGAAAGCGATCCCGTACCGGATAGGGCTC]
[+] EMBL BM608644 [CCGCACAACCGAAACATTGCATCTACGTTCGATTCTGTTTGCACACCGATGTAGCCAGAATAATGCTAATCACAGTTTTCCCTTCCATTGTGCAAGCTACAGTAGTTAAAGCTAGTTAAGCGAACGTGCTGCTAACAATTGTTCGGCTCCAGATCACCCAAAAACACAGCAAATCAGTTTACGAGGAAGCCACGAGGACACACCGCATCGTTCAAAGCACTCAAAAGGGCGTGTGTAGCAAAACAAAAAGGCAATGAGCAATCGGCGGAAGAAAACCGATCGGCATGATCACGAAACGCTTCTCCCGCCTGTCGATGCCGACGAGGAAAAGCACGAAAAAAGTGACCTGCGGGGTGACTGGGGCAACATTGCCATCCTGTTCTTTCTCTACCTGCTGCAAGGCATTCCGATTGGACTGGCCTCGGCCATACCGATGTTGCTACAGAACCGTGGAGCAAGCTACAAACAGCAGGCTGAATTCAGTTTCGCTCACTGGCCGTTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCTGTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTCCGACGC ]
[+] EMBL BM637285 [ ccgTACAAACAGCAGGCTGAATTCAGTTTCGCTCACTGGCCGTTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCTGTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTCCGACGCAGTACCTGATCGGCATATTTATGCTGATACTTTCGCTGCACGTGAACCGTTGGCTGGGCGCGGAAACCACCGACACTGGTGGCGATGATCATGCCACCGAGCAAACCAGCACACTCAACATTCCGCTACTGACGGTCATCTTTTTCATGCTAAACTTCCTCGCCGCCACGCAGGACATTGCCGTCGATGGGTGGGCTTTAACGATGCTGAAGCGCTGCAACGTTGGGCACGCATCGACCTGCAACAGCGTCGGCCAGACGGCGGGCTATTTCCTCGGGTACGTCGCCTTCATGGCACTGGAATCGGCCGAATTCTGCAACAGCTATCTACGTGCCGAACCCGCCCCGGAAGGGTTGGTCAATCTGTCCGGTTACCTGTGGTTCTGGGGGTTGGTGTTTTTGGTTACCACCACGCTGGTTGCGCTTGGCAAGCGGGAACTATCGCCCAGCCTCGATCGGGGCCACGAGGAGCACCTGGAGCTGGACATCAAGCAAACCTACCGCTTGCTGGTGGACATTATGAAGACGAAACCGATTCTGACGCTGGTAGCAATACAGCTGACAGCCCAAGGCAG ]
[+] EMBL AGA285688 [ GATTCGCTGTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTCCGACGCAGTACCTGATCGGCATATTTATGCTGATACTTTCGCTGCACGTGAACCGTTGGCTGGGCGCGGAAACCACCGACACTGGTGGCGATGATCATGCCACCGAGCAAACCAGCACACTCAACATTCCGCTACTGACGGTCATCTTTTTCATGCTAAACTTCCTCGCCGCCACGCAGGACATTGCCGTCGATGGGTGGGCTTTAACGATGCTGAAGCGCTGCAACGTTGGGCACGCATCGACCTGCAACAGCGTCGGCCAGACGGCGGGCTATTTCCTCGGGTACGTCGCCTTCATGGCACTGGGATCGGCCGAATTCTGCAACAGCTATCTACGTGCCGAACCCGC ]
[-] EMBL AGA284382 [ GTGTTTTTGGTTACCCCCACGCTGGTTGCGCTTGGCAAGCGGGAACTATCGCCCAGCCTCGATCGGGGCCACGAGGAGCACCTGGAGCTGGACATCAAGCAAACCTACCGCTTGCTGGTGGACATTATGAAGATGAAACCGATTCTGACGCTGGTAGCAATACTGCTGACAG CCAAGGCAGGGTTTGCTGCCTGCGACGCGGTCACCTCGCTGAAACTGATCGACGCAGGCGTACCGAAGGATAAACTGGCCCTGCTGGTTGTACCGCTCGTTCCACTGCAGATTGTACTACCGTTGGCAATCAGCAAATACACCGCTGGAACGCGACCGATGGAAGTGTACCTGAAAGCGATCCCGTACCGGATAGGGCTC]
consensusID : consensus_6594#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence
[CCGGTTTGCACACCGATGTAGCCAGAATAATGCTAATCACAGTTTTCCCTTCCATTGTGCAAGCTATAGTAGTTAAAGCTAGCTAAGCGAACGTGCTGCTAACAATTGTTCGGCACCAGATCACAGCAATCCAGTTTACGAGGAAGCCACGGGGACACACCGCATCGTTCAAAGCACTCAAAAGGGCGTGTGTAGCAGAGCCAAAAGGCAATGAGCAATCGGCGCAAGAAAACCGATCGGCATGATCACGAAACGCTTCTCCCGCCGGTCGATGCCGACGAGGAAAAGCACGAAAAAAGTGACCTGCGGGGTGACTGGGGCAACATTGCCATCCTGTTCTTTCTCTACCTGCTGCAAGGCATTCCGATTGGACTGGCCTCGGCCATACCGATGTTGCTACAGAACCGTGGAGCAAGCTACAAACAGCAGGCTGAATTCAGTTTCGCTCACTGGCCATTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCTGTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTTCCGACGCAGTACCTGATCGGCATATTCATGCTGATACTTATCGCTGCACGTGAACCGTTGGGCTGGGGCGCGGAGACCACCGACACCGGTGGCGACAACCATGCCACCGAGCAAACCAGCACACTCAACATTCCG]
[+] EMBL BM605613 [CCGGTTTGCACACCGATGTAGCCAGAATAATGCTAATCACAGTTTTCCCTTCCATTGTGCAAGCTATAGTAGTTAAAGCTAGCTAAGCGAACGTGCTGCTAACAATTGTTCGGCACCAGATCACAGCAATCCAGTTTACGAGGAAGCCACGGGGACACACCGCATCGTTCAAAGCACTCAAAAGGGCGTGTGTAGCAGAGCCAAAAGGCAATGAGCAATCGGCGCAAGAAAACCGATCGGCATGATCACGAAACGCTTCTCCCGCCGGTCGATGCCGACGAGGAAAAGCACGAAAAAAGTGACCTGCGGGGTGACTGGGGCAACATTGCCATCCTGTTCTTTCTCTACCTGCTGCAAGGCATTCCGATTGGACTGGCCTCGGCCATACCGATGTTGCTACAGAACCGTGGAGCAAGCTACAAACAGCAGGCTGAATTCAGTTTCGCTCACTGGCCATTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCTGTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTTCCGACGCAGTACCTGATCGGCATATTCATGCTGATACTTATCGCTGCACGTGAACCGTTGGGCTGGGGCGCGGAGACCACCGACACCGGTGGCGACAACCATGCCACCGAGCAAACCAGCACACTCAACATTCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6594#0 CCGCACAACCGAAACATTGCATCTACGTTCGATTCTGTTTGCACACCGATGTAGCCAGAA 60
consensus_6594#1 ---------------------------------CCGGTTTGCACACCGATGTAGCCAGAA 27
* ************************
consensus_6594#0 TAATGCTAATCACAGTTTTCCCTTCCATTGTGCAAGCTACAGTAGTTAAAGCTAGTTAAG 120
consensus_6594#1 TAATGCTAATCACAGTTTTCCCTTCCATTGTGCAAGCTATAGTAGTTAAAGCTAGCTAAG 87
*************************************** *************** ****
consensus_6594#0 CGAACGTGCTGCTAACAATTGTTCGGCTCCAGATCACCCAAAAACACAGCAAATCAGTTT 180
consensus_6594#1 CGAACGTGCTGCTAACAATTGTTCGGCACCAGATCAC----------AGCAATCCAGTTT 137
*************************** ********* ***** ******
consensus_6594#0 ACGAGGAAGCCACGAGGACACACCGCATCGTTCAAAGCACTCAAAAGGGCGTGTGTAGCA 240
consensus_6594#1 ACGAGGAAGCCACGGGGACACACCGCATCGTTCAAAGCACTCAAAAGGGCGTGTGTAGCA 197
************** *********************************************
consensus_6594#0 AAACAAAAAGGCAATGAGCAATCGGCGGAAGAAAACCGATCGGCATGATCACGAAACGCT 300
consensus_6594#1 GAGCCAAAAGGCAATGAGCAATCGGCGCAAGAAAACCGATCGGCATGATCACGAAACGCT 257
* * ********************** ********************************
consensus_6594#0 TCTCCCGCCTGTCGATGCCGACGAGGAAAAGCACGAAAAAAGTGACCTGCGGGGTGACTG 360
consensus_6594#1 TCTCCCGCCGGTCGATGCCGACGAGGAAAAGCACGAAAAAAGTGACCTGCGGGGTGACTG 317
********* **************************************************
consensus_6594#0 GGGCAACATTGCCATCCTGTTCTTTCTCTACCTGCTGCAAGGCATTCCGATTGGACTGGC 420
consensus_6594#1 GGGCAACATTGCCATCCTGTTCTTTCTCTACCTGCTGCAAGGCATTCCGATTGGACTGGC 377
************************************************************
consensus_6594#0 CTCGGCCATACCGATGTTGCTACAGAACCGTGGAGCAAGCTACAAACAGCAGGCTGAATT 480
consensus_6594#1 CTCGGCCATACCGATGTTGCTACAGAACCGTGGAGCAAGCTACAAACAGCAGGCTGAATT 437
************************************************************
consensus_6594#0 CAGTTTCGCTCACTGGCCGTTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCT 540
consensus_6594#1 CAGTTTCGCTCACTGGCCATTCAGCTTAAAGCTGCTGTGGGCCCCGATCGTAGATTCGCT 497
****************** *****************************************
consensus_6594#0 GTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATT-CCGACGCAGTACCTGATCG 599
consensus_6594#1 GTTCTGGAAACGCTTCGGACGGCGAAAATCATGGCTCATTTCCGACGCAGTACCTGATCG 557
**************************************** *******************
consensus_6594#0 GCATATTTATGCTGATACTT-TCGCTGCACGTGAACCGTTGGCT--GGGCGCGGAAACCA 656
consensus_6594#1 GCATATTCATGCTGATACTTATCGCTGCACGTGAACCGTTGGGCTGGGGCGCGGAGACCA 617
******* ************ ********************* ********* ****
consensus_6594#0 CCGACACTGGTGGCGATGATCATGCCACCGAGCAAACCAGCACACTCAACATTCCGCTAC 716
consensus_6594#1 CCGACACCGGTGGCGACAACCATGCCACCGAGCAAACCAGCACACTCAACATTCCG---- 673
******* ******** * ************************************
consensus_6594#0 TGACGGTCATCTTTTTCATGCTAAACTTCCTCGCCGCCACGCAGGACATTGCCGTCGATG 776
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 GGTGGGCTTTAACGATGCTGAAGCGCTGCAACGTTGGGCACGCATCGACCTGCAACAGCG 836
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 TCGGCCAGACGGCGGGCTATTTCCTCGGGTACGTCGCCTTCATGGCACTGGAATCGGCCG 896
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 AATTCTGCAACAGCTATCTACGTGCCGAACCCGCCCCGGAAGGGTTGGTCAATCTGTCCG 956
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 GTTACCTGTGGTTCTGGGGGTTGGTGTTTTTGGTTACCACCACGCTGGTTGCGCTTGGCA 1016
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 AGCGGGAACTATCGCCCAGCCTCGATCGGGGCCACGAGGAGCACCTGGAGCTGGACATCA 1076
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 AGCAAACCTACCGCTTGCTGGTGGACATTATGAAGACGAAACCGATTCTGACGCTGGTAG 1136
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 CAATACAGCTGACAGCCCAAGGCAGGGTTTGCTGCCTGCGACGCGGTCACCTCGCTGAAA 1196
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 CTGATCGACGCAGGCGTACCGAAGGATAAACTGGCCCTGCTGGTTGTACCGCTCGTTCCA 1256
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 CTGCAGATTGTACTACCGTTGGCAATCAGCAAATACACCGCTGGAACGCGACCGATGGAA 1316
consensus_6594#1 ------------------------------------------------------------
consensus_6594#0 GTGTACCTGAAAGCGATCCCGTACCGGATAGGGCTC 1352
consensus_6594#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||