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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6595#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 696 fasta sequence
[CCGCCCACGCGTCCGTGTTTACATCCTTGGAAAACGTATTTGTTCGCCGT-GAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGACCTGAAGGCGTTCCCGCAAACGCTGGTCGACCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCTGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGGACACGAACCCGAAGGCGGCCAAGATGTCGGTGGACATCATGATCGAGCTGTAC-CGGAAGCAGGTGTGGAACGATGCGAAAACGGTGAACGTGATCGCGAACGTGGGCTGCTTTTCCAAGTTTACCAAGGT]
[+] EMBL BM597423 [CCGCCCACGCGTCCGTGTTTACATCCTTGGAAAACGTATTTGTTCGCCGTGGAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGACCTGAAGGCGTTCCCGCAAACGCTGGTCGACCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCTGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGGACACGAACCCGAAGGCGGCCAAGATGTCGGTGGACATCATGATCGAGCTGTAC CGGAAGCAGGTGTGGAACGAT ]
[+] EMBL BM599659 [ ccgCGTATTTGTTCGCGGT GAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGACCTGAAGGCGTTCCCGCAAACGCTGGTCGACCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCTGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGGACACGAACCCGAAGGCGGCCAAGATGTCGGTGGACATCATGATCGAGCTGTACAGGGAAGCAGGTGTGGAACGATGCGAAAACGGTGAACGTGATCGCGAACGTGGGCTGCTTTTCCAAGTTTACCAAGGT]
[+] EMBL BM617168 [ c cgAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGACCTGAAGGCGTTCCCGCAAACGCTGGTCGACCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCTGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGGACACGAACCCGAAGGCGGCCAAGATGTCGGTGGACATCATGATCGAGCTGTAC CGGAAGCAGGTGTGGAACGATGCGAAAACGGTGAACGTGATCGCGAACGTGGGCTGCTTTTCCAAGTTTACC ]
consensusID : consensus_6595#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 612 fasta sequence
[CCGCCCACGCGTCCGGTGGTCAGGCCCGTAGCGTAGCTGGCTGTGTTTGTTTACATCCTTGGAAAACGTATTTGTTCGCCGTGGAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGATCTGAAGGCGTTCCCGCAAACGCTGGTCGATCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCTGGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGGACACGAACCCGA]
[+] EMBL BM637988 [CCGCCCACGCGTCCGGTGGTCAGGCCCGTAGCGTAGCTGGCTGTGTTTGTTTACATCCTTGGAAAACGTATTTGTTCGCCGTGGAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGATCTGAAGGCGTTCCCGCAAACGCTGGTCGATCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCTGGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGA ]
[+] EMBL BM623334 [ GCCCGTAGCGTAGCTGGCTGTGTTTGTTTACATCCTTGGAAAACGTATTTGTTCGCCGTGGAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGACAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTTCCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAAGGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCTGGACGATCTGAAGGCGTTCCCGCAAACGCTGGTCGATCTGCTGAAGACGCACTCGACCACGCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAACCTAATCTCGCCGCTCGATCT GCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACAAGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCAAGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGGACACGAACCCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6595#0 --------------------------------CCGCCCACGCGTCCGTGTTTACATCCTT 28
consensus_6595#1 CCGCCCACGCGTCCGGTGGTCAGGCCCGTAGCGTAGCTGGCTGTGTTTGTTTACATCCTT 60
* ** *************
consensus_6595#0 GGAAAACGTATTTGTTCGCCGTG-AAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGA 87
consensus_6595#1 GGAAAACGTATTTGTTCGCCGTGGAAAAAGGATGGTGCGCCACAATAATCAGCTGCCGGA 120
*********************** ************************************
consensus_6595#0 CAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTT 147
consensus_6595#1 CAATTTGCCGCAGCTGCAGAACCTGATCAAGCGCGATCCGGAATCGTACCGCGATGAGTT 180
************************************************************
consensus_6595#0 CCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAA 207
consensus_6595#1 CCTGCAGCAGTACCACCATTTCCACAGCGTGCTGGACATCTTCCGGCTCGAGCCGGACAA 240
************************************************************
consensus_6595#0 GGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCT 267
consensus_6595#1 GGAAAACAAGAGCCTGTGCGAGTCGATCATGTTTCTGGCGCAGATCGCCCAGTGCTACCT 300
************************************************************
consensus_6595#0 GGACGACCTGAAGGCGTTCCCGCAAACGCTGGTCGACCTGCTGAAGACGCACTCGACCAC 327
consensus_6595#1 GGACGATCTGAAGGCGTTCCCGCAAACGCTGGTCGATCTGCTGAAGACGCACTCGACCAC 360
****** ***************************** ***********************
consensus_6595#0 GCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAA 387
consensus_6595#1 GCTCGATCCGGAGATGCGCAACACGTTCTGCCGGGCGCTGATACTGCTGCGGAACAAGAA 420
************************************************************
consensus_6595#0 CCTAATCTCGCCGCTCGATCTG-CTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACA 446
consensus_6595#1 CCTAATCTCGCCGCTCGATCTGGCTGGAGCTGTTCTTCCAGCTGCTGCGCTGCCCGGACA 480
********************** *************************************
consensus_6595#0 AGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCA 506
consensus_6595#1 AGGCGCTGCGCACGTTCCTGGAGAACCACATCATCAACGACATCAAAAACATGAACGCCA 540
************************************************************
consensus_6595#0 AGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGG 566
consensus_6595#1 AGCAGAAGGACATGAAGCTGAACTCGACGCTGCAGAACTTCATGTACACGATGCTGCGGG 600
************************************************************
consensus_6595#0 ACACGAACCCGAAGGCGGCCAAGATGTCGGTGGACATCATGATCGAGCTGTACCGGAAGC 626
consensus_6595#1 ACACGAACCCGA------------------------------------------------ 612
************
consensus_6595#0 AGGTGTGGAACGATGCGAAAACGGTGAACGTGATCGCGAACGTGGGCTGCTTTTCCAAGT 686
consensus_6595#1 ------------------------------------------------------------
consensus_6595#0 TTACCAAGGT 696
consensus_6595#1 ----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||