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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6726#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 847 fasta sequence
[CATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTCGGTCATCTACGGCTCTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGGTAAGAATGCGAAGACCGGCGGTAACAAGAAGACGGTTCCAATAAAAATCAGTTCCCCGAATTGACTCCCACATCATTCGCGATCAGCGAACCGTCGGAAGTTGGTGACCCTCGTAGGTGCCACGGGACGCACACACAGCACACACCGATTAAGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGCGGCGAACGCCATCAGCCTGCCGGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGGCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAACAGGGACCGTTTCCGCAGCCAGTTTGAAAAAGCGTGCCCAGGGCGCGGCGCTCAAACCCGGCGGCAAGGCGGTGCGCATCAAGCTGAACGTTACGGATGACTCGCTCGCGCTAAACTACGAAACCGACGAAAGTTACTCCTTTACCGTGGGGGCCGGCTCTAGCAAGGACGAGCTGCAGG]
[+] EMBL BX626343 [CATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTCGGTCATCTACGGCTCTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGGTAAGAATGCGAAGACCGGCGGTAACAAGAAGACGGTTCCAATAAAAATCAGTTCCCCGAATTGACTCCCACATCATTCGCGATCAGCGAACCGTCGGAAGTTGGTGACCCTCGTAGGTGCCACGGGACGCACACACAGCACACACCGATTAAGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGCGGCGAACGCCATCAGCCTGCCGGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGGCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTG ]
[+] EMBL BX623598 [ CGAAAACCGGCCAGCAGATCCGGGTAAGAATGCAAAGACCGGCGGTAACAAGAAGACGGTTCCAATAAAAATCAGTTCCCCGAATTGACTCCCACATCATTCGCGATCAGCGAACCGTCGGAAGTTGGTGACCCTCGTAGGTGCCACGGGACG CACACAGCGCACACCGATTAAGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCGGCGGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAACAGGGACCGTTTCCGCAGCCAGTTTGAAAAAGCGTGCCCAGGGCGCGGCGCTCAAACCCGGCGGCAAGGCGGTGCGCATCAAGCTGAACGTTACGGATGACTCGCTCGCGCTAAACTACGAAACCGACGAAAGTTACTCCTTTACCGTGGGGGCCGGCTCTAGCAAGGACGAGCTGCAGG]
consensusID : consensus_6726#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 742 fasta sequence
[CCGCGGACGCGTGGGTTAGCTCCATCCCAACGTCCCTATCCAAGCGAAGAAAAAAACACAAACACAAATTTCAAGTAGTGTGTAGAACCCTCCAACTCGCAACACAAGTGGGAGATGGTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTTGGTCGTCTACGGCTTTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCGGCGGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAACAGGGGACCGTTTCCGCAGCCAGCCTTAAAAAGCGTGCCCAGGGCGCGGCGCTCAAACCCGGCGGCAAGGCGGTGCGAATCAAGCTGA]
[+] EMBL BM621115 [CCGCGGACGCGTGGGTTAGCTCCATCCCAACGTCCCTATCCAAGCGAAGAAAAAAACACAAACACAAATTTCAAGTAGTGTGTAGAACCATCCAACTCGCAACACAAGTGGGAGATGGTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTTGGTCGTCTACGGCTTTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCCTTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGCGGCGAACGCCATCAGCC ]
[+] EMBL BM622733 [ ccgAAAAACACAAACATAAATTTCAAGTAGTGTGTAGAACCCTCCAACTCGCAACACAAGTGGGAGATGGTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTCGGTCATCTACGGCTTTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCGGCGGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACC ]
[+] EMBL BM583917 [ CCGCCAACTCGCAACACAAGTGGGAGATGGTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTTGGTCGTCTACGGCTTTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGCTGTTCGATTATCTCCAGCAGTCTTCGAAACAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCGGCGGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAACAGGGGACCGTTTCCGCAGCCAGCCTTAAAAAGCGTGCCCAGGGCGCGGCGCTCAAACCCGGCGGCAAGGCGGTGCGAATCAAGCTGA]
consensusID : consensus_6726#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCACGGACCAGCTGCTGGCGTTGTTTACCCTTTTGGGTTCCCTTTTTTCCTTAGCTCCATCCCAACGTCCCTATCCAAGCGAAGAAAAAAACACAAACACAAATTTCAAGTAGTGTGTAGAACCATCCAACTCGCAACACAAGTGGGAGATGGTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTTGGTCGTCTACGGCTTTACCTGCTCCGACGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCCTTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGCGGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAACAGGGGACCGTTTCCGCAGCCAGCTTAAAAAAGCGTGCCCAGGG]
[+] EMBL BM647687 [CCGCGGACGCGTGGGCGGACGCGTGGGCACGGACCAGCTGCTGGCGTTGTTTACCCTTTTGGGTTCCCTTTTTTCCTTAGCTCCATCCCAACGTCCCTATCCAAGCGAAGAAAAAAACACAAACACAAATTTCAAGTAGTGTGTAGAACCATCCAACTCGCAACACAAGTGGGAGATGGTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACCGGTTTTTTGGTCGTCTACGGCTTTACCTGCTCCGACGCTGTTCGATTATCTCCAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCCTTATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGGCTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGCGGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCTCTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGACCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAACAGGGGACCGTTTCCGCAGCCAGCTTAAAAAAGCGTGCCCAGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6726#1 ----------------------------------------------------------CC 2
consensus_6726#2 CCGCGGACGCGTGGGCGGACGCGTGGGCACGGACCAGCTGCTGGCGTTGTTTACCCTTTT 60
consensus_6726#0 ----CATTGCCCGAATCAACCCATCAACCC--ATCCAGAACCGGT-TTTTCGGTCATCTA 53
consensus_6726#1 GCGGACGCGTGG---GTTAGCTCCATCCCAACGTCCCTATCCAAGCGAAGAAAAAAACAC 59
consensus_6726#2 GGGTTCCCTTTTTTCCTTAGCTCCATCCCAACGTCCCTATCCAAGCGAAGAAAAAAACAC 120
consensus_6726#0 CGGCTCTACCTGCTCCGACGGTACGTAATCGCGTGCGAAGGAAAGGCAAAGTGGGTGCCT 113
* * * * * * *** * * *** ** *
consensus_6726#1 AAACACAAATTTCAAGTAG-TGTGTAGAACCCTCCAACTCGCAACA-CAAGTGGGAGATG 117
consensus_6726#2 AAACACAAATTTCAAGTAG-TGTGTAGAACCATCCAACTCGCAACA-CAAGTGGGAGATG 178
consensus_6726#0 ACCGAAAACCGGCCAGCAGATCCGGGTAAGAATGCGAAGACCGGCGGTAACAAGAAGACG 173
* * ** * ** ** * * ** * * * * * ** * *** *
consensus_6726#1 GTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACC 177
consensus_6726#2 GTGCAGAAGATGAAATAATCAGGACATTGCCCGAATCAACCCATCAACCCATCCAGAACC 238
consensus_6726#0 GTTCCAAT-----AAAAATCAG----TTCCCCGAATTGACTC-CCACATCATTCGCGATC 223
** * * ** ****** ** ******* ** * ** *** * * *
consensus_6726#1 GGT---TTTTTGGTCGTCTACGGCTTTACCTGCTCCGACGGTACGTAATCGCGTGCGAAG 234
consensus_6726#2 GGT---TTTTTGGTCGTCTACGGCTTTACCTGCTCCGACG-------------------- 275
consensus_6726#0 AGCGAACCGTCGGAAGTTGGTGACCCTCGTAGGTGCCACGGGACGCACACACAGCACACA 283
* * ** ** * * * * * * ***
consensus_6726#1 GAAAGGCAAAGTGGGTGCCTACCGAAAACCGGCCAGCAGATCCGGCTGTTCGATTATCTC 294
consensus_6726#2 ---------------------------------------------CTGTTCGATTATCTC 290
consensus_6726#0 ------------------------------------CCGATTAAGCTGTTCGATTATCTC 307
***************
consensus_6726#1 CAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATT 354
consensus_6726#2 CAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCCTT 350
consensus_6726#0 CAGCAGTCTTCGAAGCAGCGACAGCAGGATGGCTGAAGTACAATATCTTGTGACGGCATT 367
********************************************************* **
consensus_6726#1 ATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGG 414
consensus_6726#2 ATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGG 410
consensus_6726#0 ATTTGCTCTATTTGTTTGCACTGGAATCGGAGTCCACTCGGAGGGCGAAGCCGTATGGGG 427
************************************************************
consensus_6726#1 CTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCGGC 474
consensus_6726#2 CTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGC 470
consensus_6726#0 CTACCAGTGCAAGAACGATCGCTGCGTCAAAACGGCCATCTCGGAGGAATCATACCCAGC 487
********************************************************* **
consensus_6726#1 GGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCT 534
consensus_6726#2 GGCGAACGCCATCAGCCTACCAGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGCCTCCT 530
consensus_6726#0 GGCGAACGCCATCAGCCTGCCGGCATGTCGGCTGTTCTGCGGCGAAGGAGCTGGGCTCCT 547
****************** ** ******************************** *****
consensus_6726#1 CTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGA 594
consensus_6726#2 CTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGA 590
consensus_6726#0 CTGGCCACAGCCAACCGGGCAGCTGGCGGTGGAGAACGAGCTCGCCCACATCGACCCCGA 607
************************************************************
consensus_6726#1 CCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAA 654
consensus_6726#2 CCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAA 650
consensus_6726#0 CCAGGTGTGGTTCCAGTGGGACGAAAAGCTGACCCAGCTCGTCGGTCTGTGGGAAGCGAA 667
************************************************************
consensus_6726#1 CAGGGGACCGTTTCCGCAGCCAGCCTTAAAAAGCGTGCCCAGGGCGCGGCGCTCAAACCC 714
consensus_6726#2 CAGGGGACCGTTTCCGCAGCCAGCTTAAAAAAGCGTGCCCAGGG---------------- 694
consensus_6726#0 CAGGG-ACCGTTTCCGCAGCCAGTTTGAAAAAGCGTGCCCAGGGCGCGGCGCTCAAACCC 726
***** ***************** * *****************
consensus_6726#1 GGCGGCAAGGCGGTGCGAATCAAGCTGA-------------------------------- 742
consensus_6726#2 ------------------------------------------------------------
consensus_6726#0 GGCGGCAAGGCGGTGCGCATCAAGCTGAACGTTACGGATGACTCGCTCGCGCTAAACTAC 786
consensus_6726#1 ------------------------------------------------------------
consensus_6726#2 ------------------------------------------------------------
consensus_6726#0 GAAACCGACGAAAGTTACTCCTTTACCGTGGGGGCCGGCTCTAGCAAGGACGAGCTGCAG 846
consensus_6726#1 -
consensus_6726#2 -
consensus_6726#0 G 847
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||