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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6732#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1182 fasta sequence
[CCGGTTTGTTTTCATTGTTTTTTTTTCTATTAGTTTGGGATTAGAGGAACACACACACACATACTTACACGATGCATTATTGCTCTTTATCGAGATATATGGTGCCTCAATCTGAATGCTCACAGTGAAAATTCTTTTCCTTTTCGAAACCTAGCGACAATGTGTGCTTTTACACTGTAACCGATCGTTACGACACATTACTCAAATATACCAACGCGTACTTAGAGCTACACTGATTTGCTGCTACTTTTATGTACAATCATGCGAATAGAACGTCCACCTGTGCTCACCTGAGTGCTCAGTGAGCGTCCTATCAAGCGCAAACAATGAACAAATCAAAGATAGTTATTTAAGACGGAAAAGGCACGCTCTAGCAGTAATGGTGAGAGTAAGCAACCAACACAAGGTGCGTTTAGTTAGTATTTCATGCTCATTTCTGTTCACCGTAACGCGATCGACCCTATATAATAACCTTAACCTCGTCCCAACGTGTACCACCAGCAAAACTGCAACCGAAACAATCCAAACCTGACAACAACACA-AAAAAACAGTCGCCAAATCTTACAGTATAGAGATTATCTTTTTCCTAAATAAAACAATACGACTTGTAGTGATGGATACCAGCAGAGACGATTTTGCGCGATTTTCTTTACAAAAGAGATTTCATGTTCACGCGGTTCGTTTCGGGGACGTTAGGTGTCTCAAGGAAAAAGGAAACATGTACAATTGCTGTCTATTTTCTGTAAAGTGCTACACAAAATATAGCAATTAGGAGCTCGTGCTTTTTCCGTAACGGTTTTTGTATAGTAACTTATGTGCTTTCTTAGCGACACTTAATAATCTACACACCACTCTCCCCCATATCTCCTCGCGACCGTGCGCAATCTGTGCTTTTCACAACGTAAACGTAACGCAAAGAGCGTG----TTACGCCAGTTTCTTTCCGTTAGTCACCGAGGTGCTGTATCCCGGTAGGTTTGCTTCATTCTGTTCGAGTACGAGTTTTTAGTTTTTAAGTGCGTTAATGCGCACGGGCAGCAAAGGTAAACTTACGTTCTATTTACGAAGTAATGCAATGCAACCATTTATATGAGTACTATTAACTATGTATATTCGGTAACTGTGTAATGGACGGCGTGCGAAGGTAACAAAAATAAAGCAAAACAAATACCTTTTTTTTTACTC]
[+] EMBL BM600381 [CCGGTTTGTTTTCATTGTTTTTTTTTCTATTAGTTTGGGATTAGAGGAACACACACACACATACTTACACGATGCATTATTGCTCTTTATCGAGATATATGGTGCCTCAATCTGAATGCTCACAGTGAAAATTCTTTTCCTTTTCGAAACCTAGCGACAATGTGTGCTTTTACACTGTAACCGATCGTTACGACACATTACTCAAATATACCAACGCGTACTTAGAGCTACACTGATTTGCTGCTACTTTTATGTACAATCATGCGAATAGAACGTCCACCTGTGCTCACCTGAGTGCTCAGTGAGCGTCCTATCAAGCGCAAACAATGAACAAATCAAAGATAGTTATTTAAGACGGAAAAGGCACGCTCTAGCAGTAATGGTGAGAGTAAGCAACCAACACAAGGTGCGTTTAGTTAGTATTTCATGCTCATTTCTGTTCACCGTAACGCGATCGACCCTATATAATAACCTTAACCTCGTCCCAACGTGTACCACCAGCAAAACTGCAACCGAAACAATCCAAACCTGATAACAACACACAAAAAACAGTCGCCAAATCTTACAATATAGAGATTATCTTTTTCCTAAATAAAACAATACGACTTGTAGTGATGGATACCAGCAGAGACGATTTTGCGCGATTTTCTTTACAAAAGAGATTTCATTTTCACG ]
[+] EMBL BX628532 [ CGATCGACCCTATATAATAACCTTAACCTCGTCCCAACGTGTACCACCAGCAAAACTGCAACCGAAACAATCCAAACCTGACAACAACACA AAAAAACAGTCGCCAAATCTTACAGTATAGAGATTATCTTTTTCCTAAATAAAACAATACGACTTGTAGTGATGGATACCAGCAGAGACGATTTTGCGCGATTTTCTTTACAAAAGAGATTTCATGTTCACGCGGTTCGTTTCGGGGACGTTAGGTGTCTCAAGGAAAAAGGAAACATGTACAATTGCTGTCTATTTTCTGTAAAGTGCTACACAAAATATAGCAATTAGGAGCTCGTGCTTTTTCCGTAACGGTTTTTGTATAGTAACTTATGTGCTTTCTTAGCGACACTTAATAATCTACACACCACTCTCCCCCATATCTCCTCGCGACCGTGCGCAATCTGTGCTTTTCACAACGTAAACGTAACGCAAAGAGCGTG TTACGCCAGTTTCTTTCCGTTAGTCACCGAGGTGCTGTATCCCGGTAGGTTTGCTTCATTCTGTTCGAGTACGAGTTTTTAGTTTTTAAGTGCGTTAATGCGCACGGGCAGCAAAGGTAAACTTACGTTCTATTTACGAAGTAATGCAATGCAACCATTTATATGAGTACTATTAATTATGTATATTCGGTAACTGTGTAATGGACGGCAAGCGAAGGTAACAAAAATAAAGCAAAACAAATACATT ]
[+] EMBL BM577635 [ CGACCC ACGCGT CC GCAAAACTGCAACCGAAACAATCCAAACCTGACAACAACACA AAAAAACAGTCGCCAAATCTTACAGTATAGAGATTATCTTTTTCCTAAATAAAACAATACGACTTGTAGTGATGGATACCAGCAGAGACGATTTTGCGCGATTTTCTTTACAAAAGAGATTTCATGTTCACGCGGTTCGTTTCGGGGACGTTAGGTGTCTCAAGGAAAAAGGAAACATGTACAATTGCTGTCTATTTTCTGTAAAGTGCTACACAAAATATAGCAATTAGGAGCTCGTGCTTTTTCCGTAACGGTTTTTGTATAGTAACTTATGTGCTTTCTTAGCGACACTTAATAATCTACACACCACTCTCCCCCATATCTCCTCGCGACCGTGCGCAATCTGTGCTTTTCACAACGTAAACGTAACGCAAAGAGCGTG TTACGCCAGTTTCTTTCCGTTAGTCACCGAGGTGCTGTATCCCGGTAGGTTTGCTTCATTCTGTTCGAGTACGAGTTTTTAGTTTTTAAGTGCGTTAATGCGCACGGGCAGCAAAGGTAAACTTACGTTCTATTTACGAAGTAATGCAATGCAACCATT ]
[+] EMBL BM614207 [ CGCGATCGTGCGCAATCTGTGCTTTTCACAACGTAAACGTAACGCAAAGAGCGTGTAGTTTACGCCAGTTTCTTTGCGTTAGACACCGAGGTGCTGTATCCCGGTAGGTTTGCTTCATTCTGTTCGAGTACGAGTTTTTAGTTTTTAAGTGCGTTAATGCGCACGGGCAGCAAAGGTAAACTTACGTTCTATTTACGAAGTAATGCAATGCAACCATTTATATGAGTACTATTAACTATGTATATTCGGTAACTGTGTAATGGACGGCGTGCGAAGGTAACAAAAATAAAGCAAAACAAATACCTTTTTTTTTACTC]
[+] EMBL BM614213 [ CGCGATCGTGCGCAATCTGTGCTTTTCACAACGTAAACGTAACGCAAAGAGCGTGTAGTTTACGCCAGTTTCTTTGCGTTAGACACCGAGGTGCTGTATCCCGGTAGGTTTGCTTCATTCTGTTCGAGTACGAGTTTTTAGTTTTTAAGTGCGTTAATGCGCACGGGCAGCAAAGGTAAACTTACGTTCTATTTACGAAGTAATGCAATGCAACCATTTATATGAGTACTATTAACTATGTATATTCGGTAACTGTGTAATGGACGGCGTGCGAAGGTAACAAAAATAAAGCAAAACAAATACCTTTTTTTTTACTC]
consensusID : consensus_6732#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 304 fasta sequence
[ACAATCATGCGAATAGAACGTNCNCACCTGTGCTCACCTGAGCAGTGAGCGTACCTATCAAGCGCAAACAATGAACAAATCAAAGATAGTTATTTAAGACGGAAAAGGCACGCTCTAGCAGTGATGGTGAGAGAATGCAACCAATACAAGGTGCGTATAGTTAGTATTTCATGCTCATTTCTGTNNCACCGTAACGCGATCGACCCTATATAATAACCTTAACCTCGTCCCAACGTGTACCACCAGCAAAACTGCCAACCGAAACAATCCCAGATACCTGACAACCACCACCAAAAAAACAGCT]
[+] EMBL BX619096 [ACAATCATGCGAATAGAACGTNCNCACCTGTGCTCACCTGAGCAGTGAGCGTACCTATCAAGCGCAAACAATGAACAAATCAAAGATAGTTATTTAAGACGGAAAAGGCACGCTCTAGCAGTGATGGTGAGAGAATGCAACCAATACAAGGTGCGTATAGTTAGTATTTCATGCTCATTTCTGTNNCACCGTAACGCGATCGACCCTATATAATAACCTTAACCTCGTCCCAACGTGTACCACCAGCAAAACTGCCAACCGAAACAATCCCAGATACCTGACAACCACCACCAAAAAAACAGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6732#0 CCGGTTTGTTTTCATTGTTTTTTTTTCTATTAGTTTGGGATTAGAGGAACACACACACAC 60
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 ATACTTACACGATGCATTATTGCTCTTTATCGAGATATATGGTGCCTCAATCTGAATGCT 120
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CACAGTGAAAATTCTTTTCCTTTTCGAAACCTAGCGACAATGTGTGCTTTTACACTGTAA 180
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CCGATCGTTACGACACATTACTCAAATATACCAACGCGTACTTAGAGCTACACTGATTTG 240
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CTGCTACTTTTATGTACAATCATGCGAATAGAACGTCCAC--CTGTGCTCACCTGAGTGC 298
consensus_6732#1 ---------------ACAATCATGCGAATAGAACGTNCNCACCTGTGCTCACCTGAG--- 42
********************* * * ***************
consensus_6732#0 TCAGTGAGCGT-CCTATCAAGCGCAAACAATGAACAAATCAAAGATAGTTATTTAAGACG 357
consensus_6732#1 -CAGTGAGCGTACCTATCAAGCGCAAACAATGAACAAATCAAAGATAGTTATTTAAGACG 101
********** ************************************************
consensus_6732#0 GAAAAGGCACGCTCTAGCAGTAATGGTGAGAGTAAGCAACCAACACAAGGTGCGTTTAGT 417
consensus_6732#1 GAAAAGGCACGCTCTAGCAGTGATGGTGAGAGAATGCAACCAATACAAGGTGCGTATAGT 161
********************* ********** * ******** *********** ****
consensus_6732#0 TAGTATTTCATGCTCATTTCTGTTC-ACCGTAACGCGATCGACCCTATATAATAACCTTA 476
consensus_6732#1 TAGTATTTCATGCTCATTTCTGTNNCACCGTAACGCGATCGACCCTATATAATAACCTTA 221
*********************** **********************************
consensus_6732#0 ACCTCGTCCCAACGTGTACCACCAGCAAAACTGC-AACCGAAACAATCCAA---ACCTGA 532
consensus_6732#1 ACCTCGTCCCAACGTGTACCACCAGCAAAACTGCCAACCGAAACAATCCCAGATACCTGA 281
********************************** ************** * ******
consensus_6732#0 CAACAACA--CAAAAAAACAGTCGCCAAATCTTACAGTATAGAGATTATCTTTTTCCTAA 590
consensus_6732#1 CAACCACCACCAAAAAAACAGCT------------------------------------- 304
**** ** ***********
consensus_6732#0 ATAAAACAATACGACTTGTAGTGATGGATACCAGCAGAGACGATTTTGCGCGATTTTCTT 650
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 TACAAAAGAGATTTCATGTTCACGCGGTTCGTTTCGGGGACGTTAGGTGTCTCAAGGAAA 710
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 AAGGAAACATGTACAATTGCTGTCTATTTTCTGTAAAGTGCTACACAAAATATAGCAATT 770
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 AGGAGCTCGTGCTTTTTCCGTAACGGTTTTTGTATAGTAACTTATGTGCTTTCTTAGCGA 830
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CACTTAATAATCTACACACCACTCTCCCCCATATCTCCTCGCGACCGTGCGCAATCTGTG 890
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CTTTTCACAACGTAAACGTAACGCAAAGAGCGTGTTACGCCAGTTTCTTTCCGTTAGTCA 950
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CCGAGGTGCTGTATCCCGGTAGGTTTGCTTCATTCTGTTCGAGTACGAGTTTTTAGTTTT 1010
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 TAAGTGCGTTAATGCGCACGGGCAGCAAAGGTAAACTTACGTTCTATTTACGAAGTAATG 1070
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 CAATGCAACCATTTATATGAGTACTATTAACTATGTATATTCGGTAACTGTGTAATGGAC 1130
consensus_6732#1 ------------------------------------------------------------
consensus_6732#0 GGCGTGCGAAGGTAACAAAAATAAAGCAAAACAAATACCTTTTTTTTTACTC 1182
consensus_6732#1 ----------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||