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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6734#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1107 fasta sequence
[GAAAACAATGATATAGGGCATATATTTATAAGTGTTTTGTTTTGTTTTTTCTTCTTTTTAACGTTTACCTATAATAGCATGTCGCTGTTTTGTTGTTTGCTTGTGTACAAGAGTGTGTGTTAAACATTTTGCTGTATTTGTTGCTTTCGTTTGTTTGTGTGTTTTGGGCTGTTAGTTTCGCTTGCGTTTTGCTGGCTGCAGGCATGCTGTTATGTCTGTTTTTGTATGTGTTTGTTTGTTTGTTGTTTCTGTGTCGCTTTCTTTGTGTAGTTTTCAGCATGGAATTGCTCACTGCGCCTGCGGATCACATTGCAACAGCCGCACGATCGACGGATCACTCTTCGCGCCCTCGATGAACTCCTCCAGGCTCAGCTTGCCGTCCTTGTTGCGATCCATCTGGCGGAAGATTTTGTCCGTCCGCTTTTCCGGCGTGCTTTCGTCCTCGGGCATCTTCATCACCGAGCCGACCATTTTGTAGATTGCGGTAACAATTTCCAGCATTTCCTGTCGGGAGATGTATCCGTTACCGTCCAGATCGTACATCGAGAACGCCCATTTCAGCTTCTGCTCTAGCTTGCCGCGCGAGGTAACGCTCAGTGCGCACAGGAACTCCCGGAAGTCGATCGTACCGTCACCGTTCGCGTCGAACGTTCGAAACACATGCTCGGCGAACTTGCTGGCGTCGCCGTAGGGGAAGAAGTTGCCATAAATTTTCTTAAACTCCTCCACCGACAGATGACCGCTCGGGCAGTCTTTCAGGAAGCCTTTGTACCATTCCTGTATCTCAGCATCTGAGAATTCTGTGTTCTGCTTCAGGTCCTCCAGCACCTCCGGCTTCAGTTTGCTGTTTTGCTTGCCCATTCTGGCTGTGTTTTTGTGTGTTTGAAGTCTGGTGGGGGGGGAAGGGATGGGGGAGTGCTTCTCGGTGTGTTGAACACTCTCCAGAGACTCCAGAGAGGGCTGGTTGGCTGGTAATGGCTCGGAGCTTGTGACGAGATGCCTTCTCCGTTTGTTACGCGCGTTCCGGGATGAACGAACGACGAGTGCCGCTGCTGCTTACTTCACA--CTGCGTCGGGGGTTTTCAGTACACACTCTCACTCTCTCCGG]
[+] EMBL CNS09PL6 [GAAAACAATGATATAGGGCATATATTTATAAGTGTTTTGTTTTGTTTTTTCTTCTTTTTAACGTTTACCTATAATAGCATGTCGCTGTTTTGTTGTTTGCTTGTGTACAAGAGTGTGTGTTAAACATTTTGCTGTATTTGTTGCTTTCGTTTGTTTGTGTGTTTTGGGCTGTTAGTTTCGCTTGCGTTTTGCTGGCTGCAGGCATGCTGTTATGTCTGTTTTTGTATGTGTTTGTTTGTTTGTTGTTTCTGTGTCGCTTTCTTTGTGTAGTTTTCAGCATGGAATTGCTCACTGCGCCTGCGGATCACATTGCAACAGCCGCACGATCGACGGATCACTCTTCGCGCCCTCGATGAACTCCTCCAGGCTCAGCTTGCCGTCCTTGTTGCGATCCATCTGGCGGAAGATT ]
[+] EMBL CNS08SP1 [ aTTGTTTTGTTTTTTCTTCTTTTTAACGTTTACCTATAATAGCATGTCGCTGTTTTGTTGTTTGCTTGTGTACAAGAGTGTGTGTTAAACATTTTGCTGTATTTGTTGCTTTCGTTTGTTTGTGTGTTTTGGGCTGTTAGTTTCGCTTGCGTTTTGCTGGCTGCAGGCATGCTGTTATGTCTGTTTTTGTATGTGTTTGTTTGTTTGTTGTTTCTGTGTCGCTTTCTTTGTGTAGTTTTCAGCATGGAATTGCTCACTGCGCCTGCGGATCACATTGCAACAGCCGCACGATCGACGGATCACTCTTCGCGCCCTCGATGAACTCCTCCAGGCTCAGCTTGCCGTCCTTGTTGCGATCCATCTGGCGGAAGATTTTGTCCGTCCGCTTTTCCGGCGTGCTTTCGTCCTCGGGCATCTTCATCACCGAGCCGACCATTTTGTAGATTGCGGTAACAATTTCCAGCATTTCCTGTCGGGAGATGTATCCGTTACCGTCCAGATCGTACATCGAGAACGCCCATTTCAGCTTCTGCTCTAGCTTGCCGCGCGAGGTAACGCTCAGTGCGCACAGGAACTCCCGGAAGTCGATCGTACCGTCACCGTTCGCGTCGAACGTTCGAAACACATGCTCGGCGAACTTGCTGGCGTCGCCGTA GGGAAGAAGTTGCCATAAATTTTCTTAAACTCCTCCACCGACAGATGACCGCTTGGGCAGTCTTTCAGGAAGCCTTTGTACCATTCCTGTATCTCAGCATCTGAGAATTCTGTGTTCTGCTTCAGGTCCTCCAGCACCTCCGGCTTCAGTTTGCTGTTTTGCTTGCCCATTCTGGCTGTGTTTTTGTGTGTTTGAAGTCTGGTGGGGGGGGAAGGGATGGGGGAGTTCTTCTCGGTGTGTTG ACACTCTCCAGAGACTCCAGAGAGGGCTGGTTGGCT ]
[+] EMBL CNS08M72 [ GCTTGTGTACAAGAGTGTGTGTTAAACATTTTGCTGTATTTGTTGCTTTAGTTTGTTTGTGTGTTTTGGGCTGTTAGTTTCGCTTGCGTTTTGCTGGCTGCAGGCATGCTGTTATGTCTGTTTTTGTATGTGTTTGTTTGTTTGTTGTTTCTGTGTCGCTTTCTTTGTGTAGTTTTCAGCATGGAATTGCTCACTGCGCCTGCGGATCACATTGCAACAGCCGCACGATCGACGGATCACTCTTCGCGCCCTCGATGAACTCCTCCAGGCTCAGCTTGCCGTCCTTGTTGCGATCCATCTGGCGGAAGATTTTGTCCGTCCGCTTTTCCGGCGTGCTTTCGTCCTCGGGCATCTTCATCACCGAGCCGACCATTTTGTAGATTGCGGTAACAATTTCCAGCATTTCCTTTC ]
[-] EMBL BM648776 [ GCTTTCGTCCTCGGGCATCTTCATCACCGAGCCGACCATTTTGTAGATTGCGGTAACAATTTCCAGCATTTCCTGTCGGGAGATGTATCCGTTACCGTCCAGATCGTACATCGAGAACGCCCATTTCAGCTTCTGCTCTAGCTTGCCGCGCGAGGTAACGCTCAGTGCGCACAGGAACTCCCGGAAGTCGATCGTACCGTCACCGTTCGCGTCGAACGTTCGAAACACATGCTCGGCGAACTTGCTGGCGTCGCCGTAGGGGAAGAAGTTGCCATAAATTTTCTTAAACTCCTCCACCGACAGATGACCGCTCGGGCAGTCTTTCAGGAAGCCTTTGTACCATTCCTGTATCTCAGCATCTGAGAATTCTGTGTTCTGCTTCAGGTCCTCCAGCACCTCCGGCTTCAGTTTGCTGTTTTGCTTGCCCATTCTGGCTGTGTTTTTGTGTGTTTGAAATCTGGTGGGGGGGGAAGGGATGGGGGAGTGCTTCTCGGTGTGTTGAACACTCTCCAGAGACTCCAGAGAGGGCTGGTTGGCTGGTAATGGCTCGGAGCTTGTGACGAGATGCCTTCTCCGTTTGTTACGCGCGTTCCGGGATGAACGAACGACGAGTGCCGCTGCTGCTTACTTCACA CTGCGTCGGGGGTTTTCAGTACACACTCTCACTCTCTCCGG]
[-] EMBL BX620836 [ ATCTTCATCACCGAGCCGACCATTTTGTAGATTGCGGTAACAATTTCCAGCATTTCCTGTCGGGAGATGTATCCGTTACCGTCCAGATCGTACATCGAAAACGCCCATTTCAGCTTCTGCTCTAGCTTGCCGCGCGAGGTAACGCTCAGTGCGCACAGGAACTCCCGGAAGTCGATCGTACCGTCACCGTTCGCGTCGAACGTTCGAAACACATGCTCGGCGAACTTGCTGGCGTCGCCGTAGGGGAAGAAGTTGCCATAAATTTTCTTAAACTCCTCCACCGACAGATGACCGCTCGGGCAGTCTTTCAGGAAGCCTTTGTACCATTCCTGTATCTCAGCATCTGAGAATTCTGTGTTCTGCTTCAGGTCCTCCAGCACCTCCGGCTTCAGTTTGCTGTTTTGCTTGCCCATTCTGGCTGTGTTTTTGTGTGCTTGAAGACTGGTGGGGGGGGGAGGGATGGGGGAGTGCTTCTCGGTGTGTTGAACACTCTCCAGAGACTCCAGAGAGGGCTGGTTGGCTGGTAATGGCTCGGAGCTTGTGTCGAGCTGCCTTCTCCGTTTGTTACGCGCGTTCCGGGATGAACTAACGACGAGTGCCGCTGCTGCTTACTTCACAGCCTGCaa ]
consensusID : consensus_6734#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 106 fasta sequence
[CGCCGCGACCAGGTCAAGCGCCCGAACGCGAAGAACGACAGGGCCGATGAACGTGCCGCCACCACGTACCTGCTGGTCGGTGGAGCCGCCGTCTCGACGGGGTACG]
[+] EMBL BX613190 [CGCCGCGACCAGGTCAAGCGCCCGAACGCGAAGAACGACAGGGCCGATGAACGTGCCGCCACCACGTACCTGCTGGTCGGTGGAGCCGCCGTCTCGACGGGGTACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6734#0 GAAAACAATGATATAGGGCATATATTTATAAGTGTTTTGTTTTGTTTTTTCTTCTTTTTA 60
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 ACGTTTACCTATAATAGCATGTCGCTGTTTTGTTGTTTGCTTGTGTACAAGAGTGTGTGT 120
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 TAAACATTTTGCTGTATTTGTTGCTTTCGTTTGTTTGTGTGTTTTGGGCTGTTAGTTTCG 180
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 CTTGCGTTTTGCTGGCTGCAGGCATGCTGTTATGTCTGTTTTTGTATGTGTTTGTTTGTT 240
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 TGTTGTTTCTGTGTCGCTTTCTTTGTGTAGTTTTCAGCATGGAATTGCTCACTGCGCCTG 300
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 CGGATCACATTGCAACAGCCGCACGATCGACGGATCACTCTTCGCGCCCTCGATGAACTC 360
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 CTCCAGGCTCAGCTTGCCGTCCTTGTTGCGATCCATCTGGCGGAAGATTTTGTCCGTCCG 420
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 CTTTTCCGGCGTGCTTTCGTCCTCGGGCATCTTCATCACCGAGCCGACCATTTTGTAGAT 480
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 TGCGGTAACAATTTCCAGCATTTCCTGTCGGGAGATGTATCCGTTACCGTCCAGATCGTA 540
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 CATCGAGAACGCCCATTTCAGCTTCTGCTCTAGCTTGCCGCG-CGAGGTAACGC-TCAGT 598
consensus_6734#1 -----------------------------------CGCCGCGACCAGGTCAAGCGCCCGA 25
****** * **** * ** * *
consensus_6734#0 GCGCACAGGAACTCCCGGAAGTCGATCGTACCGTCACC--GTTCGCGTCGAACGTTCGAA 656
consensus_6734#1 ACGCGAAGAACGACAGGGCCGATGAACGTGCCGCCACCACGTACCTGCTGGTCGGTGGAG 85
*** ** * * ** * ** *** *** **** ** * * * ** * **
consensus_6734#0 ACACATGCTCGGCGAACTTGCTGGCGTCGCCGTAGGGGAAGAAGTTGCCATAAATTTTCT 716
consensus_6734#1 CCGCCGTCTCGACGGGGTACG--------------------------------------- 106
* * **** ** *
consensus_6734#0 TAAACTCCTCCACCGACAGATGACCGCTCGGGCAGTCTTTCAGGAAGCCTTTGTACCATT 776
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 CCTGTATCTCAGCATCTGAGAATTCTGTGTTCTGCTTCAGGTCCTCCAGCACCTCCGGCT 836
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 TCAGTTTGCTGTTTTGCTTGCCCATTCTGGCTGTGTTTTTGTGTGTTTGAAGTCTGGTGG 896
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 GGGGGGAAGGGATGGGGGAGTGCTTCTCGGTGTGTTGAACACTCTCCAGAGACTCCAGAG 956
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 AGGGCTGGTTGGCTGGTAATGGCTCGGAGCTTGTGACGAGATGCCTTCTCCGTTTGTTAC 1016
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 GCGCGTTCCGGGATGAACGAACGACGAGTGCCGCTGCTGCTTACTTCACACTGCGTCGGG 1076
consensus_6734#1 ------------------------------------------------------------
consensus_6734#0 GGTTTTCAGTACACACTCTCACTCTCTCCGG 1107
consensus_6734#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||