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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6816#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 730 fasta sequence
[GCAGATNCCCCGAGGTTTCATACCATCGGGA-CTCCAGCAATCATGGCAATTTTCAATAAAATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCACCGTGCTTACCTTCGGATACACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTTCCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACATTCCCTCGTNTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCGTATCTGGATTAAACCATTCAACCAAATACTAAACTTTANATAAACCCCCCGAGCTGTGGTCCACGTGGTGTACATCTTGCTGCGTGAGGTGTGGACTACATATGCACACAACACCCNCCCCCCCCCCACCANCACAAACTCCTAAACGCGCAGGCCGCAAGCTATATCCCCTTANANCTGACCCGCTANAATCCTATACCCCTTGNCCACATGGCCCCGCACGCTCCANACAACCNCTCACTACACNTGGNCAAAACCCTTGCCGATATACCCCACCCTATCAACTCGCCCTTTGCCNCCCACATCCCCCTCTATCGCCACCCTTGCCG]
[+] EMBL AL692427 [GCAGATNCCCCGAGGTTTCATACCATCGGGA CTCCAGCAATCATGGCAATTTTCAATAAAATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCACCGTGCTTACCTTCGGATACACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTTCCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACATTCCCTCGTNTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCGTATCTGGATTAAACCATTCAACCAAATACTAAACTTTANATAAACCCCCCGAGCTGTGGTCCACGTGGTGTACATCTTGCTGCGTGAGGTGTGGACTACATATGCACACAACACCCNCCCCCCCCCCACCANCACAAACTCCTAAACGCGCAGGCCGCAAGCTATATCCCCTTANANCTGACCCGCTANAATCCTATACCCCTTGNCCACATGGCCCCGCACGCTCCANACAACCNCTCACTACACNTGGNCAAAACCCTTGCCGATATACCCCACCCTATCAACTCGCCCTTTGCCNCCCACATCCCCCTCTATCGCCACCCTTGCCG]
[+] EMBL BM632413 [ ccgGGGACCTCCAGCAATCATGGCAATTTTCAATAAAATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCACCGTGCTTACCTTCGGAT CACGGAACAGGAATTCACCCAGCTGCCGA CCATATAATTTTCCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACATTCCCTCGT TCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCGTATCTGGATTAAACCATTCAACCAAATACTAAACTTTAAATAAACCCCCCGAG TGTGGTCCACGTGGTGTACATCTTGCTGCGTGAGGTGTGGA TA ATATG ]
consensusID : consensus_6816#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 522 fasta sequence
[CCGGGCAATTTTCAATAAAATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCACCGTGCTTACCTTCGGATCACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTTCCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACATTCCCTCGTTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCG-TATCTGGATTAAACCATTCAACCAAATACTA-AACTTTAAATAAACCCCCCG-AGTGTGGTCCACGTGGTGTACATCTTGCTGCGTGAGGTGTGGATAATATGAAAATCGAAGCATATTTTCATTTTAAATTTTAGATAACGTCTTTAAAGGTATTACACCTTCAT]
[+] EMBL BM606057 [CCGGGCAATTTTCAATAAAATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCACCGTGCTTACCTTCGGATCACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTTCCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACATTCCCTCGTTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCG TATCTGGATTAAACCATTCAACCAAATACTA AACTTTAAATAAACCCCCCG AGTGTGGTCCACGTGGTGTACATCTTGCTGCGTGAGGTGTGGATAATATGAAAATCGAAGCATATTTTCATTTTAAATTTTAGATAACGTCTTTAAAGGTATTACACCTTCAT]
[+] EMBL BX613706 [ TACTCTGCCGCCCAGCACCGTGCTTACCTTCGGATCACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTTCCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACATTCCCTCGTTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCG TATCTGGATTAAACCATTCAACCAAATACTA AACTTTAAATAAACCCCCCG AGTGTGGTCCACGTGGTGTACATCTTGCTGCGTGAGGTGT ]
[-] EMBL BM603332 [ ATTTCAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTTGCGAACATTCCCTCGTTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCTCCAGTGTACGAGCAGCCCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCG TATCTGGATTAAACCATTCAACCAAATACTA AACTCTAAATAAACCCCCCG AGTGTGGTCCACGTGGTGTACATCATGCTGCGTGAGGTGTGGATAATATGAAAAaaaacgg ]
[+] EMBL BX619483 [ ctgctCGTACACTACGGAACCGNGATCTGGATTAAACCATTCAACCAAATACTATCACTTTAAATAAACCCCCCGNAGTGTGGTCCACGTGGTGTACATCTTGCTGCGTGng ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6816#0 GCAGATNCCCCGAGGTTTCATACCATCGGGACTCCAGCAATCATGGCAATTTTCAATAAA 60
consensus_6816#1 -----------------------------------------CCGGGCAATTTTCAATAAA 19
* ****************
consensus_6816#0 ATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCAC 120
consensus_6816#1 ATTCAAATCGTGCTCGGATTTCTGTCCCTGCTTCATGCGGCTTACTCTGCCGCCCAGCAC 79
************************************************************
consensus_6816#0 CGTGCTTACCTTCGGATACACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTT 180
consensus_6816#1 CGTGCTTACCTTCGGAT-CACGGAACAGGAATTCACCCAGCTGCCGATCGATATAATTTT 138
***************** ******************************************
consensus_6816#0 CCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTT 240
consensus_6816#1 CCAAGCGATTGCGAGCTTAATCTACATCATCTACAACATCCTGCAAGTGGTGGGCGATTT 198
************************************************************
consensus_6816#0 CAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACAT 300
consensus_6816#1 CAAGGAGATTCGTGCTGCGGTTGATTTGCAGGCGAAATCGTGGGAAACTCTCGCGAACAT 258
************************************************************
consensus_6816#0 TCCCTCGTNTCTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGC 360
consensus_6816#1 TCCCTCGTT-CTACACGTTCAACCACCGAGGCAAAGCGCTGTCCCCAGTGTACGAGCAGC 317
******** **************************************************
consensus_6816#0 CCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCGTATCTGGATTAAACCATTC 420
consensus_6816#1 CCGACCCGGAGCAGTACGATCGTGCGTACACGACGGAACCGTATCTGGATTAAACCATTC 377
************************************************************
consensus_6816#0 AACCAAATACTAAACTTTANATAAACCCCCCGAGCTGTGGTCCACGTGGTGTACATCTTG 480
consensus_6816#1 AACCAAATACTAAACTTTAAATAAACCCCCCGAG-TGTGGTCCACGTGGTGTACATCTTG 436
******************* ************** *************************
consensus_6816#0 CTGCGTGAGGTGTGGACTACATATGCACACAACACCCNCCCCCCCCCCACCANCACAAAC 540
consensus_6816#1 CTGCGTGAGGTGTGGATAATATGAAAAT-CGAAGCATATTTTC--------ATTTTAAAT 487
**************** * ** * * * * * * ***
consensus_6816#0 TCCTAAACGCGCAGGCCGCAAGCTATATCCCCTTANANCTGACCCGCTANAATCCTATAC 600
consensus_6816#1 TTTAGATAACGTCT-TTAAAGGTATTACACCTTCAT------------------------ 522
* * ** * * ** ** * *
consensus_6816#0 CCCTTGNCCACATGGCCCCGCACGCTCCANACAACCNCTCACTACACNTGGNCAAAACCC 660
consensus_6816#1 ------------------------------------------------------------
consensus_6816#0 TTGCCGATATACCCCACCCTATCAACTCGCCCTTTGCCNCCCACATCCCCCTCTATCGCC 720
consensus_6816#1 ------------------------------------------------------------
consensus_6816#0 ACCCTTGCCG 730
consensus_6816#1 ----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||