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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6927#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 814 fasta sequence
[CCGGACTAGTTCTAGCCCACGCGTCCGGCCTTGCCCCGTACAAGCGTACAGCGCACGAGATCATTCACCACACAGTTCGCCAGTGTGCTGATTCGTATGCGGTTGCGTGTAGTAGCGGATCATAGTTAGCGTCGCTCCAAACATGTCCACCACGCTTCGCCGAGTGTTTGTTTACGGGACGCTGAAGAGGGGCGAACCGAACCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGACGTACGGTTGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTGCCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATCGTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAATAGCAGGCGCTGGTACTAATTAGACATTCAGGGCGCGTGCACAACAAAAATAAAGATAAGCTGCAGCGGCAAAGAAGAGCCAACAGATTCGCAATGAGTCGTCAAACATTATTGAAGGTCATTTGAAATCGCTTAAACACATCTTTTATAATCTACATTGGGGAACATGATGGGAAG]
[+] EMBL BM652293 [CCGGACTAGTTCTAGCCCACGCGTCCGGCCTTGCCCCGTACAAGCGTACAGCGCACGAGATCATTCACCACACAGTTCGCCAGTGTGCTGATTCGTATGCGGTTGCGTGTAGTAGCGGATCATAGTTAGCGTCGCTCCAAACATGTCCACCACGCTTCGCCGAGTGTTTGTTTACGGGACGCTGAAGAGGGGCGAACCGAACCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGACGTACGGTTGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTGCCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATCGTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAATAGCAGGCGCTGGTACTAATTAGACAT ]
[-] EMBL BX627418 [ TTTACGGGACGCTGAAGAGGGGCGANCCGANCCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGACGTACGGTTGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTGCCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATCGTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAATAGCAGGCGCTGGTACTAATTAGACATTCAGGGCGCGTGCACAACAAAAATAAAGATAAGCTGCAGCGGCAAAGAAG ]
[+] EMBL BX613773 [ CCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTGCCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCGGTACGCGGAATCGGATGATATCGTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACAATGCCGCCAATAATAGCAGGCGCTGGTACTAATTAGACATTCAGGGCGCGTGCACAACAAAAATAAAGATAAGCTGCAGCGACAAAGAAGAGCCAACAGATTCGCAATGAGTCGTCAAACATTATTGAAGGTCATTTGAAATCGCTTAAACACATCTTTTATAATCTACATTGGGGAACATGATGGGAAG]
consensusID : consensus_6927#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence
[TGAGATTGGCATAGTGCGCTAGCCTTGCCCCGTACAAGCGTACAGCGCACGAGATCATTCACCACACAGTTCGCCAGTGTGCTGATTCGTATGCGGTTGCGTGTAGTAGCGGATCATAGTTAGCGTCGCTCCAAACATGTCCACCACGCTTCGCCGAGTGTTTGTTTACGGGACGCTGAAGAGGGGCGAACCGAACCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGACGTACGGTTGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTGCCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATCGTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAATAGCAGGCGCTGGTACTAATTAGACAT]
[-] EMBL BX620333 [TGAGATTGGCATAGTGCGCTAGCCTTGCCCCGTACAAGCGTACAGCGCACGAGATCATTCACCACACAGTTCGCCAGTGTGCTGATTCGTATGCGGTTGCGTGTAGTAGCGGATCATAGTTAGCGTCGCTCCAAACATGTCCACCACGCTTCGCCGAGTGTTTGTTTACGGGACGCTGAAGAGGGGCGAACCGAACCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGACGTACGGTTGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTGCCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATCGTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAATAGCAGGCGCTGGTACTAATTAGACAT]
consensusID : consensus_6927#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence
[CCTCGAGGCACGACTCGGGCTTTAGGCGTATGCGGTTGCGTGTAGTAGCGGATCATAGTTAGCGTCGCTCCAAACATGTTCACCNCACGGCTTCGCCGAGTGTTTGTTTACGGGACGCTTAAAGGGGCGAACCGGAAACCACCACTGGCTGACGGATGCTGGGCAACGGGGCAGGGCCCGGCGTTCATACGCGCAAAGGTCGTACGGTGGGCGCGCTATACCGCTACGTCGGTTTGGCACACCGGGGACAACGTGCCCTTTCTNGGCTGGANCGTATCCGCGGGCGACCCGTGTGGCGACTCTGNGTCCGTGGGCGAACATTTTACTGGAAAATTCGGANCGGATACCGCCATTAGCTAGGGAGCCCAGGGGTTCTGNACACGTTGCTAGGAGGGGACTAATTCCCGGCG]
[+] EMBL BX469056 [CCTCGAGGCACGACTCGGGCTTTAGGCGTATGCGGTTGCGTGTAGTAGCGGATCATAGTTAGCGTCGCTCCAAACATGTTCACCNCACGGCTTCGCCGAGTGTTTGTTTACGGGACGCTTAAAGGGGCGAACCGGAAACCACCACTGGCTGACGGATGCTGGGCAACGGGGCAGGGCCCGGCGTTCATACGCGCAAAGGTCGTACGGTGGGCGCGCTATACCGCTACGTCGGTTTGGCACACCGGGGACAACGTGCCCTTTCTNGGCTGGANCGTATCCGCGGGCGACCCGTGTGGCGACTCTGNGTCCGTGGGCGAACATTTTACTGGAAAATTCGGANCGGATACCGCCATTAGCTAGGGAGCCCAGGGGTTCTGNACACGTTGCTAGGAGGGGACTAATTCCCGGCG]
consensusID : consensus_6927#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[TCAGCAGAATCGGNCCGAGGTGCGATCATAGTTAGCGTCGCTCCAAAACATGTNCACCACGCTTCGCCGAGTGTTGTTTACGGGACGCTAAGAGGGGCGAACCGAACCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGTCGTACGGTGGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATC]
[+] EMBL BX466619 [TCAGCAGAATCGGNCCGAGGTGCGATCATAGTTAGCGTCGCTCCAAAACATGTNCACCACGCTTCGCCGAGTGTTGTTTACGGGACGCTAAGAGGGGCGAACCGAACCACCACTGGCTGACGGATGCGGCCAACGGGCAGGCCCGCTTCATCGCCAAAGGTCGTACGGTGGGGCGCTATCCGCTCGTCGTTGCCACCCGGCACAACGTGCCCTTTCTGCTGGACGTTCGCGGCACCGGGCACTCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTGGAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGTGCGGTGGAGTGCTGCTGGGTCTATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6927#0 CCGGACTAGTTCTAGCCCACGCGTCCGGCCTTGCCCCGTACAAGCGTACAGCGCACGAGA 60
consensus_6927#1 ------TGAGATTGGCATAGTGCGCTAGCCTTGCCCCGTACAAGCGTACAGCGCACGAGA 54
consensus_6927#3 ------------------------------------------------------------
consensus_6927#2 ------------------------------------------------------------
consensus_6927#0 TCATTCACCACACAGTTCGCCAGTGTGCTGATTCGTATGCGGTTGCGTGTAGTAGCG-GA 119
consensus_6927#1 TCATTCACCACACAGTTCGCCAGTGTGCTGATTCGTATGCGGTTGCGTGTAGTAGCG-GA 113
consensus_6927#3 -----------------------------------TCAGCAGAATCGGNCCGAGGTGCGA 25
consensus_6927#2 -------CCTCGAGGCACGACTCGGGCTTTAGGCGTATGCGGTTGCGTGTAGTAGCG-GA 52
* ** * ** * * * **
consensus_6927#0 TCATAGTTAGCGTCGCTCCAAA-CATGTCCACCAC---GCTTCGCCGAGTGTTTGTTTAC 175
consensus_6927#1 TCATAGTTAGCGTCGCTCCAAA-CATGTCCACCAC---GCTTCGCCGAGTGTTTGTTTAC 169
consensus_6927#3 TCATAGTTAGCGTCGCTCCAAAACATGTNCACCAC---GCTTCGCCGAGTGTT-GTTTAC 81
consensus_6927#2 TCATAGTTAGCGTCGCTCCAAA-CATGTTCACCNCACGGCTTCGCCGAGTGTTTGTTTAC 111
********************** ***** **** * *************** ******
consensus_6927#0 GGGACGCTGAAGAGGGGCGAACCG--AACCACCACTGGCTGACGGATGC-GGCCAACGGG 232
consensus_6927#1 GGGACGCTGAAGAGGGGCGAACCG--AACCACCACTGGCTGACGGATGC-GGCCAACGGG 226
consensus_6927#3 GGGACGCT-AAGAGGGGCGAACCG--AACCACCACTGGCTGACGGATGC-GGCCAACGGG 137
consensus_6927#2 GGGACGCTTAA-AGGGGCGAACCGGAAACCACCACTGGCTGACGGATGCTGGGCAACGGG 170
******** ** ************ *********************** ** *******
consensus_6927#0 C--AGGCCCGC--TTCAT-CGC-CAAAGGACGTACGGTTGG-GCGCTAT-CCGCT-CGTC 283
consensus_6927#1 C--AGGCCCGC--TTCAT-CGC-CAAAGGACGTACGGTTGG-GCGCTAT-CCGCT-CGTC 277
consensus_6927#3 C--AGGCCCGC--TTCAT-CGC-CAAAGGTCGTACGGTGGG-GCGCTAT-CCGCT-CGTC 188
consensus_6927#2 GCAGGGCCCGGCGTTCATACGCGCAAAGGTCGTACGGTGGGCGCGCTATACCGCTACGTC 230
****** ***** *** ****** ******** ** ******* ***** ****
consensus_6927#0 GTTGC----CACCCGGCACAACGTGCCCTTTCTG--CTGGACGTTCGCGGCACCGGGCAC 337
consensus_6927#1 GTTGC----CACCCGGCACAACGTGCCCTTTCTG--CTGGACGTTCGCGGCACCGGGCAC 331
consensus_6927#3 GTTGC----CACCCGGCACAACGTGCCCTTTCTG--CTGGACGTTCGCGGCACCGGGCAC 242
consensus_6927#2 GGTTTGGCACACCGGGGACAACGTGCCCTTTCTNGGCTGGAN---CGTATCCGCGGGCGA 287
* * **** ** **************** ***** ** * *****
consensus_6927#0 TCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTG 397
consensus_6927#1 TCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTG 391
consensus_6927#3 TCGGTCGTGGGCGAAATTTACGAAATCGACGATCGCATGCTGGGCCGGCTCGACGTGCTG 302
consensus_6927#2 CC---CGTGTGGCGACTCTGNG---TCCGTGGGCGAACATTTTACTGG---AAAATTCGG 338
* **** * * * * * ** * ** * * * ** * * * *
consensus_6927#0 GAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGT 457
consensus_6927#1 GAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGT 451
consensus_6927#3 GAGGACTATCCGCAGCTGTACGATCGCCGGCCAGAAGAGATACGGAACGAGACGAGCAGT 362
consensus_6927#2 ANCGGATACC----GCCATTAGCTAGGGAGCCCAGGGGTTCTGNACACGTTGCTAGGAG- 393
* ** * ** * * * * *** * *** * ** **
consensus_6927#0 GCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTG 517
consensus_6927#1 GCGGTGGAGTGCTGCTGGGTCTATCTGATACGAAGCTTTCCGAAGCGTTTGCTGGAGCTG 511
consensus_6927#3 GCGGTGGAGTGCTGCTGGGTCTATC----------------------------------- 387
consensus_6927#2 GGGACTAATTCCCGGCG------------------------------------------- 410
* * * * * * *
consensus_6927#0 CCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATC 577
consensus_6927#1 CCCCTGCTGGAGGAGTACCGGGACACGCCCGAAAAGCCGTACGCGGAATCGGATGATATC 571
consensus_6927#3 ------------------------------------------------------------
consensus_6927#2 ------------------------------------------------------------
consensus_6927#0 GTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAA 637
consensus_6927#1 GTGTTTGATGAGTGATCTGTATTGGATGGGGTGGTACGGTTGGTACGATGCCGCCAATAA 631
consensus_6927#3 ------------------------------------------------------------
consensus_6927#2 ------------------------------------------------------------
consensus_6927#0 TAGCAGGCGCTGGTACTAATTAGACATTCAGGGCGCGTGCACAACAAAAATAAAGATAAG 697
consensus_6927#1 TAGCAGGCGCTGGTACTAATTAGACAT--------------------------------- 658
consensus_6927#3 ------------------------------------------------------------
consensus_6927#2 ------------------------------------------------------------
consensus_6927#0 CTGCAGCGGCAAAGAAGAGCCAACAGATTCGCAATGAGTCGTCAAACATTATTGAAGGTC 757
consensus_6927#1 ------------------------------------------------------------
consensus_6927#3 ------------------------------------------------------------
consensus_6927#2 ------------------------------------------------------------
consensus_6927#0 ATTTGAAATCGCTTAAACACATCTTTTATAATCTACATTGGGGAACATGATGGGAAG 814
consensus_6927#1 ---------------------------------------------------------
consensus_6927#3 ---------------------------------------------------------
consensus_6927#2 ---------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||