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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6951#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1036 fasta sequence
[CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATGACGCGGACNGATAGTNATCGCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACCGCATACCACACCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCCTGGCAGTGAAACCCTGCAACCGATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGCTGCCCCTGCTGGAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTATTACTGAGTGGNACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAAGCAAGCNACGGTGTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGTATANTACATGGTTGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGGAACACCCGGNGGCCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTNGCNGATGGNCACCGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGAACGCACACCTTNATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGGCAAATGTGGGTAGGCGAAGCAGGTTACGAGGAAAGGCCAAGAGAAGCGGCAGNNCAAACCCCGACTAAAACCAAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTNTTACCAACACGCGANACAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAGCAATGGAGGAAGAATTTAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGATACAACTACCCGAGCCCCTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGGNGTCAGACACTAGCAACCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCCTTACCAGCTNGCAACATTATGCCANCCAACAG]
[+] EMBL AL693666 [CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATGACGCGGACNGATAGTNATCGCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACCGCATACCACACCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCCTGGCAGTGAAACCCTGCAACCGATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGCTGCCCCTGCTGGAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTATTACTGAGTGGNACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAAGCAAGCNACGGTGTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGTATANTACATGGTTGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGGAACACCCGGNGGCCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTNGCNGATGGNCACCGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGAACGCACACCTTNATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGGCAAATGTGGGTAGGCGAAGCAGGTTACGAGGAAAGGCCAAGAGAAGCGGCAGNNCAAACCCCGACTAAAACCAAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTNTTACCAACACGCGANACAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAGCAATGGAGGAAGAATTTAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGATACAACTACCCGAGCCCCTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGGNGTCAGACACTAGCAACCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCCTTACCAGCTNGCAACATTATGCCANCCAACAG]
consensusID : consensus_6951#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 839 fasta sequence
[TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAAACATTCTTTCGGTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC-GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG-GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTCAAAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGGAGACGGTCGCCGACTCGGCGCTACCGTACACGGCGTTCCGGTATTCGCTCGGTGTCGGCGAGGGAGAGACAAACCTGCCGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG]
[+] EMBL BX608592 [TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAAACATTCTTTCGGTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCGCAACCCGATGGTTACATCAAACCAGCCCATCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTCAAAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGGAGACGGTCGCCGACTCGGCGCTACCGTACACGGCGTTCCGGTATTCGCTCGGTGTCGGCGAGGGAGAGACAAACCTGCCGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG]
[+] EMBL CNS094OM [ gtaaTCGCTAGACGCAGACACAATGCTGCTCACAAGGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGCTGCGTTTCCAGCCCTGGCAGTG AACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCGCGCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGG ]
[+] EMBL CNS094KW [ GGTGTGGTACATCCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCCGGTTGCGTTTCCAGCCCTGGCAGTGAAACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCACTGGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTCAAAGATCCTCGAC ]
[+] EMBL AGA283274 [ CCGCCACCGCCATCCACACCGTTCGCCAGCGATGGCAGGCTGCGTTTCCAGCCCTGGCAGTGAAACCCGCGACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACAATCATCTACAAGCGGCCCGGGGCTGAACCG GCCGACTATTTGCTCGAGTGCGATGCGGCCGTTGCGCCGCGGCTCGAGAAACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGGAGCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGGAAGAGGAGATGCCGGCTGCAAGCGATCTCGCCTGTCCGGAGGGTCGGTTACACGTGTTC AAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATGAATGCAAAACGCGACTGAAGCGTATCTTTCCGGAGGCGGAGACGGTtc ]
[+] EMBL AGA283104 [ CAAACCAGCCCAGCGCACAGCCCCTTCACGATAGCGCCCCTGCCGGAGCGTAAGTTTGTGCGCGTACAAGGATCCGACGCGGTCAGCTTTCTGCAGGGACTGATGACGAACGATATGCGACACCTCGAGCACAGCAGCAC GGTGTACGCAATGTTTCTCAAGGCGAATGGGCGCGTTTTCTGTGATACA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6951#0 --CTCATGCCANATTGCCCAGGTTTTTGTCTGGACACAACATG-----ACGCGGACNGAT 53
consensus_6951#1 TCGCTAGGTAAGCATTTCTAAACCCCGTACCGTGCGCTGTCTTTAGCTGCGCGCACTGAA 60
* * * * * * * * * * * **** ** **
consensus_6951#0 AG---TNATCGCTAGACGCAGACACAAATGCTGCTCACAAGGTGTGGTACATCCTGCACC 110
consensus_6951#1 ACATTCTTTCGGTAGACGCAGACACAA-TGCTGCTCACAAGGTGTGGTACATCCGCCACC 119
* *** *************** ************************** ****
consensus_6951#0 GCATACCACACCGTATACGCAGCGATAGGCGGCTGCTGTATTACCAGCC-TGGCAGTGAA 169
consensus_6951#1 GCCATCCACACCGTTCGC-CAGCGATGGCCGGCTGC---GTTTCCAGCCCTGGCAGTGAA 175
** ********* * ******* * ******* ** ****** **********
consensus_6951#0 ACCCTGCAACCGATGGTTACATACAAACAGACCAGCGCACAGAACCCTTACACTGATAGC 229
consensus_6951#1 ACCCGCAACCCGATGGTTACATCAAACCAGCCCAGCGCACAGCCCCTTCAC---GATAGC 232
**** * ************* ** *** *********** ** * ** ******
consensus_6951#0 TGCCCCTGCTGGAGCGTAACGATTTGTGCGCGTACNAGGATCCTGACGACGGTCAGNTAT 289
consensus_6951#1 -GCCCCTGCCGGAGCGTAA--GTTTGTGCGCGTACAAGGATCC-GACG-CGGTCAGCT-T 286
******** ********* ************* ******* **** ******* * *
consensus_6951#0 TACTGAGTGGNACTTGATTGACAGAAACGCATCATTGCTAGCNACCTACAGAGACACAA- 348
consensus_6951#1 TCTGCAGGGACTGATGACGAAC-GATATGCGACACCTCGAGCA-----CAGCAGCACGGT 340
* ** * *** ** ** * ** ** * *** *** ***
consensus_6951#0 GCAAGCNACGGTGTTAACTGCGACATGTATTACTCCAAAGTGCGGANATAGGGGCGCTGT 408
consensus_6951#1 GTACGCAATGTTTCTCAAGGCGA-ATGGGCGCGTTTTCTGTGATACAATCAT--CTACAA 397
* * ** * * * * * **** *** * *** ** *
consensus_6951#0 ATANTACATGGTTGCATNNCACAAATCATACTAACCACAGCGAGNCCCGGTGGGCTTGGG 468
consensus_6951#1 GCGGCCCGGGGCTGAACCGGCCGAC---TATTTGCTCGAGTGCGATGCGGCCGTTGCGCC 454
* ** ** * * * ** * * ** * * *** * *
consensus_6951#0 AACACCCGGNGGCCCGGANGCTAAAATATATCTGGCATACCGANAGAGTTGCCGCAATTN 528
consensus_6951#1 GCGGCTCGAGAA-----ACACTTGAAGCTGTACCGGCTGCGCAAGAAGGTGCAGGTGG-A 508
* ** * ** ** * * * * * * ** *** *
consensus_6951#0 GCNGATGGNCACCGGTGTNGGACAGGCCCCNGACAGTGGACACTTNCAGAANGGAACAGA 588
consensus_6951#1 GCAGGACGCCACCTACCGGGTGTGGGCCGCCTTCAAGGAGGCCGTGCAGGAGG-AAGAGG 567
** * * **** * **** * ** * * * *** * * ** **
consensus_6951#0 ACGCACACCTTNATTNGGAACCAGCCTATGTTAACCCGGAGACTTTGNCTCCAATACAGG 648
consensus_6951#1 AGATGCCGGCTGCAAGCGATCTCGCCTGT------CCGGAGGGTCGGTTACACGTGTTCA 621
* * * ** * **** * ****** * * * *
consensus_6951#0 CAAATG-TGGGTAGGCGAAGCA-GGTTA-CGAGGAAAGGCCAA-GAGAAGCGGCAGNNCA 704
consensus_6951#1 AAGATCCTCGACTGCCGCGGCTCGGCTATCGGGTGCTTACCGACGAGCAGGAGCCGAATG 681
* ** * * * ** ** ** ** ** * ** * *** ** ** *
consensus_6951#0 AACCCCGACTAAAACCAAGGNGAGACAANTGGAATTGCGAGAGAGCCCCCGAAACACNTN 764
consensus_6951#1 AATGCAAAACGCGACTGAAGCGTATCTTCCCGGAGGCGGAGACGGTCGCCGACTCG-GCG 740
** * * ** * * * * * * **** * * **** *
consensus_6951#0 TTACCAACACGCGANACAGAGGCACCCGATCTGGCACAAACGATGANAATGGGCAACAAG 824
consensus_6951#1 CTACCG-TACACGGCGTTCCGGTATTCGCTC-GGTGTCGGCGAGGGAGAGACAAACCTGC 798
**** ** ** ** * ** ** ** *** * * * *
consensus_6951#0 CAATGGAGGAAGAATTTAAGGNCACATGGAGGGATTATGGNACANCAGNACAGACGAGAT 884
consensus_6951#1 CGGACGGTAAATGCTTCCCGCTCGAGTGTAACTGCGATCTG------------------- 839
* * ** ** * * ** * **
consensus_6951#0 ACAACTACCCGAGCCCCTTTGGGNTACACACCCGGNNGGCNAGAGNGAGTATCCNCACGG 944
consensus_6951#1 ------------------------------------------------------------
consensus_6951#0 NGTCAGACACTAGCAACCAGGTTTAAGATTAATAGCCNACAACAAGGGAACTTTTCCCCC 1004
consensus_6951#1 ------------------------------------------------------------
consensus_6951#0 TTACCAGCTNGCAACATTATGCCANCCAACAG 1036
consensus_6951#1 --------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||