|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1736 fasta sequence
[TTTTTTTTTTTGTATATATGTGACATTTATGTA-ATTCATTCCTTGATTTTATCTTTGGTCTCATATTCATAATTTGATCAAACAATTGCCGTAGTATAGAGCTTCGCTTATAAAATGTTAAGTGTGTGCTTCCCTGTTTGTAAAAG-TCCCCTACTAACTACTACTTAACCTTCAGCTTTACCCTTACATCTCCCCGACAGCGTTTAACACGCACCGCCCGAAACGTGTGCCGCTTAACGTGGCACGAAAGATGATCGCTGCGTATGAACGCTTGCTGGCAGATGTGGCACACAAACTTCCGCTCGCCCGAGTGCTTCCGTCGGTGGCGGGACAGCTCGTACGAGCGGGCAAAAGCCGCCCCACAGTTTTCCCACGGGCAGCGAAATGGCAGCGTACCGGTTTTTAGCAGTTCGTGCGCTTTTAGATGGCTTTGGCGGGTGTAGCTTTTGGGGCAA-CTTCGTACGCGCAGGAAACGTTCTGGCTGGATCCCGGGGGTCCGGAACGATCGAGTTAGCAGTGGCAGCAGCAATCGTGTCGGTTGGTGGGATCTCCTCTATCGGTGGGTTAGTAGATGGCTTTGGTGCTTCTTCTTTTAGTACTGCTTTGGTCACCTTAACTCCGGGAAAAAGCTGCTGAAATTCACTGTTCGGTAGATTGTGTCGACGCACGTGGGCGAGCAGATGATCCCGCCGGTGAAAGCGCTTCTCGCACCATCGGCAGTTGTGATTGCGATCGCTCGTGTGTTTCACCAGATGACGGTTCAGCGTTTCGGCCCGCGCAAACCGTTGCCTGCAACCGGTCCAGCTACAGGCGAAGGGTAGCTCGCCGGTGTGAGACCGTTGGTGCACCCGAA-GTGCGAAACCTTAATGTACGTTTTATCACAATGGGGCCATTCGCAGGCGTATTTGCGTTCCTTGCTGGAGTAGGTGAGCTGTTTCGGTGCCCC-AAAAAAGCTGTCCTCACCATCATCATCATCATCATACTCGTCGTCATCCGTGTCATCAACAACATCTTGCTGTGCGTTCGCATCGACGACATGAAGCTCTTCCGAATCGGATCCCCCATCGTACTCTATGATCGAATCCTCGAATTCGGTCTCGTTCGAATGAAGCTGCTCATGCACCACAAAATGCTTTTCAATTTGATTCGCACCTTGTAAAACGAGGCTTTTTTCTCGCATTCGTAGTTCGTCTTGATCATCCGAGGACTCTTCGATAAGCTCTTCCTCTACGATTTCATCCGAATTGTCGTGCGCGTCGGGCAGCAATTCTATATGACCGTTTTGTAGCAGAAATAGCAAATCACTTTGCTCATGTTGTTCCTGCTTTGACTCTTCCTGTACTATGTTGTCCTCCTTCGCCGCTTGTTTTCCAATGCACAGGGCATCCCCATTGTGGTACCTTTCATGCGCCTTCAGGTGTTCCGCGTTTAAATACAGTTTCTTACAGCCTAAATGTGTGCAGGGATGAATTTGTACCGACGGGGCAGATCCAATTGATATGGAGCTTGCATTACCAGTGGGACGGCTCTCTCCACCAACCACAGCTACGGTGGACTCATTCTGCAAAAGATACTGTAAAACGGTAACGCCGGAGCTAGACGACGA-CACAACAGGGTCGGAATCAGCACGTTCCATACTACTGTCGGTATGGTTTTGTTGCAAACATTAGTAATTTCTC--TTTTTTCTGTTTTATCTTTTTCTAAGCAGTGTTGGACGATACGCTGTTGCGGACGTG]
[+] EMBL CNS09GAA [TTTTTTTTTTTGTATATATGTGACATTTATGTACATTCATTCCTTGATTTTATCTTTGGTCTCATATTCATAATTTGATCAAACAATTGCCGTAGTATAGAGCTTCGCTTATAAAATGTTAAGTGTGTGCTTCCCTGTTTGTAAAAGCTCCCCTACTAACTACTACTTAACCTTCAGCTTTACCCTTACATCTCCCCGACAGCGTTTAACACGCACCGCCCGAAACGTGTGCCGCTTAACGTGGCACGAAAGATGATCGCTGCGTATGAACGCTTGCTGGCAGATGTGGCACACAAACTTCCGCTCGCCCGAGTGCTTCCGTCGGTGGCGGGACAGCTCGTACGAGCGGGCAAAAGCCGCCCCACAGTTTTCCCACGGGCAGCGAAATGGCAGCGTACCGGTTTTTAGCAGTTCGTGCGCTTTTAGATGGCTTTGGCGGGTGTAGCTTTTGGGGCAA CTTCGTACGCGCAGGAAACGTTCTGGCTGGATCCCGGGGGTCCGGAACGATCGAGTTAGCAGTGGCAGCAGCAATCGTGTCGGTTGGTGGGATCTCCTCTATCGGTGGGTTAGTAGATGGCTTTGGTGCTTCTTCTTTTAGTACTGCTTTGGTCACCTTAACTCCGGGAAAAAGCTGCTGAAATTCACTGTTCGGTAGATTGTGTCGACGCACGTGGGCGAGCAGATGATCCCGCCGGTGAAAGCGCTTCTCGCACCATCGGCAGTTGTGATTGCGATCGCTCGTGTGTTT ACCAGATGACGGTTCAGCGTTTCGGCCCGCGCAAACCGTTGCCTGCAACCGGTCCAGCTACAGGCGAAGGGTAGCTCtc ]
[+] EMBL CNS097EU [ TGTA ATTCATTCCTTGATTTTATCTTTGGTCTCATATTCATAATTTGATCAAACAATTGCCGTAGTATAGAGCTTCGCTTATAAAATGTTAAGTGTGTGCTTCCCTGTTTGTAAAAG TCCCCTACTAACTACTACTTAACCTTCAGCTTTACCCTTACATCTCCCCGACAGCGTTTAACACGCACCGCCCGAAACGTGTGCCGCTTAACGTGGCACGAAAGATGATCGCTGCGTATGAACGCTTGCTGGCAGATGTGGCACACAAACTTCCGCTCGCCCGAGTGCTTCCGTCGGTGGCGGGACAGCTCGTACGAGCGGGCAAAAGCCGCCCCACAGTTTTCCCACGGGCAGCGAAATGGCAGCGTACCGGTGTGGAGCAGTTCGTGCGCTTTTAGATGGCTTTGGCGGGTGTAGCTTTTGGTGCAACCTTCGTACGCGCAGGAAACGTTCTGGCTGGATCCCGGGGGTCCGGAACGATCGAGTTAGCAGTGGCAGCAGCAATCGTGTCGGTTGGTGGGATCTCCTCTATCGGTGGGTTAGTAGATGGCTTTGGTGCTTCTTCTTTTAGTACTGCTTTGGTCACCTTAACTCCGGGAAAAAGCTGCTGAAATTCACTGTTCGGTAGATTGTGTCGACGCACGTGGGCGAGCAGATGATCCCGCCGGTGAAAGCGCTTCTCGCACCATCGGCAGTTGTGATTGCGATCGCTCGTGTGTTTCACCAGATGACGGTTCAGCGTTTCGGCCCGCGCAAACCGTTGCCTGCAACCGGTCCAGCTACAGGCGAAGGGTAGCTCGCCGGTGTGAGACCGTTGGTGCACCCGAA GTGCGAAACCTTAATGTACGTTTTATCACAATGGGGCCATTCGCAGGCGTATTTGCGTTCCTTGCTGGAGTAGGTGAGCTGTTTCGGTGCCCC AAAAAAGCTGTCCTCACCATCATCATCATCATCATACTCGTCGTCATCCGTGTCATCAACAA ]
[-] EMBL CNS097ET [ ttttAAGCGCTTCTCGCACCATCGGCAGTTGTGATTGCGATCGCTCGTGTGTGTCACCAGATGACGGTTCAGCGTTTCGGCCCGCGCAAACCGTTGCCTGCAACCGGTCCAGCTACAGGCGAAGGGTAGCTCGCCGGTGTGAGACCGTTGGTGCACCCGAAGGTGCGAAACCTTAATGTACGTTTTATCACAATGGGGCCATTCGCAGGCGTATTTGCGTTCCTTGCTGGAGTAGGTGAGCTGTTTC GTGCCCC AAAAAAGCTGTCCTCACCATCATCATCATCATCATACTCGTCGTCATCCGTGTCATCAACAACATCTTGCTGTGCGTTCGCATCGACGACATGAAGCTCTTCCGAATCGGATCCCCCATCGTACTCTATGATCGAATCCTCGAATTCGGTCTCGTTCGAATGAAGCTGCTCATGCACCACAAAATGCTTTTCAATTTGATTCGCACCTTGTAAAACGAGGCTTTTTTCTCGCATTCGTAGTTCGTCTTGATCATCCGAGGACTCTTCGATAAGCTCTTCCTCTACGATTTCATCCGAATTGTCGTGCGCGTCGGGCAGCAATTCTATATGACCGTTTTGTAGCAGAAATAGCAAATCACTTTGCTCATGTTGTTCCTGCTTTGACTCTTCCTGTACTATGTTGTCCTCCTTCGCCGCTTGTTTTCCAATGCACAGGGCATCCCCATTGTGGTACCTTTCATGCGCCTTCAGGTGTTCCGCGTTTAAATACAGTTTCTTACAGCCTAAATGTGTGCAGGGATGAATTTGTACCGACGGGGCAGATCCAATTGATATGGAGCTTGCATTACCAGTGGGACGGCTCTCTCCACCAACCACAGCTACGGTGGACTCATTCTGCAAAAGATACTGTAAAACGGTAACGCCGGAGCTAGACGACGA CACAACAGGGTCGGAATCAGCACGTTCCATACTACTGTCGGTATGGTTTTGTAGCAAACATTAGT ]
[-] EMBL CNS09GA9 [ TACGTTTTATCACAATGGGGCCATTCGCAGGCGTATTTGCGTGCCTTGCTGGAGTAGGTGAGCTGTTTCGGTGCCCCAAAAAAAGCTGTCCTCACCATCATCATCATCATCATACTCGTCGTCATCCGTGTCATCAACAACATCTTGCTGTGCGTTCGCATCGACGACATGAAGCTCTTCCGAATCGGATCCCCCATCGTACTCTATGATCGAATCCTCGAATTCGGTCTCGTTCGAATGAAGCTGCTCATGCACCACAAAATGCTTTTCAATTTGATTCGCACCTTGTAAAACGAGGCTTTTTTCTCGCATTCGTAGTTCGTCTTGATCATCCGAGGACTCTTCGATAAGCTCTTCCTCTACGATTTCATCCGAATTGTCGTGCGCGTCGGGCAGCAATTCTATATGACCGTTTTGTGGCAGAAATAGCAAATCACTTTGCTCATGTTGTTCCTGCTTTGACTCTTCCTGTACTAAAAAATCCTCCTTCGCCGCTTGTTTTCCAATGCACAGGGCATCCCCATTGTGGTACCTTTCATGCGCCTTCAGGTGTTCCGCGTTTAAATACAGTTTCTTACAGCCTAAATGTGTGCAGGGATGAATTTGTACCGACGGGGCAGATCCAATTGATATGGAGCTTGCATTACCAGTGGGACGGCTCTCTCCACCAACCACAGCTACGGTGGACTCATTCTGCAAAAGATACTGTAAAACGGTAACGCCGGAGCTAGACGACGAGCACAACAGGGTCGGAATCAGCACGTTCCATACTACTGTCGGTATGGTTTTG TGCAAACATTAGTAATTTCTC TTTTTTCTGTTTTATCTTTTTCTAAGCAGTGTTGGACGATACGCTGTTGTTTACGTG]
[-] EMBL BM627125 [ GCTCTTCCGAATCGGATCCCCCATCGTACTCTATGATCGAATCCTCGAATTCGGTCTCGTTCGAATGAAGCTGCTCATGCACCACAAAATGCTTTTCAATTTGATTCGCACCTTGTAAAACGAGGCTTTTTTCTCGCATTCGTAGTTCGTCTTGATCATCCGAGGACTCTTCGATAAGCTCTTCCTCTACGATTTCATCCGAATTGTCGTGCGCGTCGGGCAGCAATTCTATATGACCGTTTTGTAGCAGAAATAGCAAATCACTTTGCTCATGTTGTTCCTGCTTTGACTCTTCCTGTACTATGTTGTCCTCCTTCGCCGCTTGTTTTCCAATGCACAGGGCATCCCCATTGTGGTACCTTTCATGCGCCTTCAGGTGTTCCGCGTTTAAATACAGTTTCTTACAGCCTAAATGTGTGCAGGGATGAATTTGTACCGACGGGGCAGATCCAATTGATATGGAGCTTGCATTACCAGTGGGACGGCTCTCTCCACCAACCACAGCTACGGTGGACTCATTCTGCAAAAGATACTGTAAAACGGTAACGCCGGAGCTAGACGACGA CACAACAGGGTCGGAATCAGCACGTTCCATACTACTGTCGGTATGGTTTTGTTGCAAACATTAGTAATTTCTC TTTTTTCTGTTTTATCTTTTTCTAAGCAGTGTTGGACGATACGCTGTTGCGG ]
[-] EMBL BM583144 [ TGACCGTTTTGTAGCAGAAATAGCAAATCACTCTGCTCATGTTGTTCCTGCTTTGACTCTTCCTGTACTATGTTGTCCTCCTTCGCCGCTTGTTTTCCAACGCACAGGGCATCCCCATTGTGGTACCTTTCATGCGCCTTCAGGTGTTCCGCGTTTAAATACAGTTTCTTACAGCCTGGATGTGTGCAGGGATGGATTTGTACCGATGGGGCAGATCCAATTGATGTGGAGCTTGCGTTACCAGTGGGACGGCTCTCTCCACCAACCACAGGTACGGTGGACTCATTCTGCAAAAGATACTGTAAAACGGTAACGCCGGAGCTAGACGACGA CACAACATGGTCGGAATCAGCACGTTCCATACTACTGTTGGTATGATTTTGTTGCAAACATTAGTAATTTCTCTTTTTTTTCTGTTTTATCTGTTTCTAAGCAGTGTTGAACGATACGCTGTTGCGG ]
clustalw multiple alignements is not computed in this case |
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||