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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7136#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1317 fasta sequence
[GGGCGGGGGCCACCCTATTCGACCGCAGAGCGTGCGCGCGGGACAGGGATCCAGGGCTCCGCTCGATGTGAGAAGCGTTTGTTTTGGTCGGTACGTGGTTGCCTGGTGGTGTGCGCGGGGCGGTGTTGTTCGTAGTATGTGCATTGGGCCGAAAGGATGTTGATGCGGTCGGGGATAGAGCGGTCGGGCAGCCGGGAGCAGCGGGACCAGCAGCAGGACTGGGTGATGATGTCGCCCCTGTGGACGGCCCGCTACGACTACGAGGCGCAGGGCGACGACGAGCTGTCGCTCCGGGTGGGCCAGATCGTGTACGTGCTGTCGACCGACAGCAGCATCTCGGGCGACGAGGGCTGGTGGACGGGCAAGATCGGGGACCGGGTGGGCATCTTTCCGTCGAACTTTGTCACGAACGAGGACCCGGCGGTGTTGAAGGTGCAGCCGGTCGAGATCCAGTACCACGAGCTCGACCTGAAGGAGGTGATCGGCGTCGGGGGCTTCAGCAAGGTGCACCGCGCCTTCCTGAACGGGGAGGAGGTGGCGGTGAAAGCGT-CCCGGCAGGACGACGAGTTCGAGGTGGCGCGGCAGAACGTGCTGCAGGAGGCGAA-CTGTCTCTGGTCGCTCAAGCATCCGAACATCGTGTCGCTCAAGGGCGTCTGTCTCGATCCGAAAACGCTCTGCCTGGTGATGGAGTACGCGCGGGGCGGCTCGCTCAACAAGATACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCGTGGTATGAAGTATCTGCACTGCGAGGCCCCAATCTCCGTCATCCATCGCGATTTGAAGAGCTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAAAATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGGCACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGATGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGGCTTCGACTCGCTGTCGGTAGCGTACGGTGTAGCAGTGAATACGCTCGCCTTACCGATCCCGAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACACCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTTTGCT-CAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGGAAAAAGGAAAGA]
[+] EMBL CNS09A35 [GGGCGGGGGCCACCCTATTCGACCGCAGAGCGTGCGCGCGGGACAGGGATCCAGGGCTCCGCTCGATGTGAGAAGCGTTTGTTTTGGTCGGTACGTGGTTGCCTGGTGGTGTGCGCGGGGCGGTGTTGTTCGTAGTATGTGCATTGGGCCGAAAGGATGTTGATGCGGTCGGGGATAGAGCGGTCGGGCAGCCGGGAGCAGCGGGACCAGCAGCAGGACTGGGTGATGATGTCGCCCCTGTGGACGGCCCGCTACGACTACGAGGCGCAGGGCGACGACGAGCTGTCGCTCCGGGTGGGCCAGATCGTGTACGTGCTGTCGACCG ]
[+] EMBL CNS09A3G [ gagCAGGGATCCAGGGCTCCGCTCGATGTGAGAAGCGTTTGTTTTGGTCGGTACGTGGTTGCCTGGTGGTGTGCGCGGGGCGGTGTTGTTCGTAGTATGTGCATTGGGCCGAAAGGATGTTGATGCGGTCGGGGATAGAGCGGTCGGGCAGCCGGGAGCAGCGGGACCAGCAGCAGGACTGGGTGATGATGTCGCCCCTGTGGACGGCCCGCTACGACTACGAGGCGCAGGGCGACGACGAGCTGTCGCTCCGGGTGGGCCAGATCGTGTACGTGCTGTCGACCGACAGCAGCATCTCGGGCGACGAGGGCTGGTGGACGGGCAAGATCGGGGACCGGGTGGGCATCTTTCCGTCGAACTTTGTCACGAACGAGGACCCGGCGGTGTTGAAGGTGCAGCCGGTCGAGATCCAGTACCACGAGCTCGACCTGAAGGAGGTGATCGGCGTCGGGGGCTTCAGCAAGGTGCACCGCGCCTTCCTGAACGGGGAGGAGGTGGCGGTGAAAGCGT CCCGGCAGGACGACGAGTTCGAGGTGGCGCGGCAGAACGTGCTGCAGGAGGCGAA CTGTCTCTGGTCGCTCAAGCATCCGAA ]
[-] EMBL CNS09A3H [ CAAGGTGCACCGCGCCTTCCTGAACGGGGAGGAGGTGGCGGTGAAAGCGTCCCCGGCAGGACGACGAGTTCGAGGTGGCGCGGCAGAACGTGCTGCAGGAGGCGAAGCTGT TCTGGTCGCTCAAGCATCCGAACATCGTGTCGCTCAAGGGCGTCTGTCTCGATCCGAAAACGCTCTGCCTGGTGATGGAGTACGCGCGGGGCGGCTCGCTCAACAAGATACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCGTGGTATGAAGTATCTGCACTGCGAGGCCCCAATCTCCGTCATCCATCGCGATTTGAAGAGCTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAAAATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGGCACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGATGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGGCTTCGACTCGCTGTCGGTAGCGTACGGTGTAGCAGTGAATACGCTCGCCTTACCGATCCCGAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACACCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTTTGCT CAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGGAAAAAGGAAAGA]
[-] EMBL CNS09A36 [ GCGCGGGGCGGCTCGCTCAACAAGATACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCGTGGTATGAAGTATCTGCACTGCGAGGCCCCAATCTCCGTCATCCATCGCGATTTGAAGAGCTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAAAATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGGCACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGATGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGGCTTCGACTCGCTGTCGGTAGCGTACGGTGTAGCAGTGAATACGCTCGCCTTACCGATCCCGAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACACCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTTTGCTACAAACGC ]
consensusID : consensus_7136#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 907 fasta sequence
[GCAGAATCCCCGAGGTTATCGAACATCGTGTCGCTCAAGGGCGTCTGTCTCGATCCGAAAACGCTCTGCCTGGTGATGNGAGTACGCGCGGGGCGGCTCGCTCAACAAGATACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCGCGGTATGAAGTATCTGCACTGCGAGGCGCCAATCTCCGTCATCCATCGCGATTTGAAGAGCTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAAAATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGGCACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGATGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGGCTTCGACTCGCTGTCGGTAGCGTACGGTGTGGCGGTGAATACGCTCGCCTTACCGATCCCGAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACACCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTTTGCTCAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGG-AAAACGGAANATCGCGGNAGTGTTGCAAGAATTGCGTAACAACAGCAAAAGGAACTACGCAGCAAAGAGGAGGAACTGACGCGAGTTCAGCAAGAGCAGCGCTACAAGGAGGAAAATCTTTGCAAAGCGAGAGCAGGAGCTGCACGCGGCGGGAAATCGAGGCTACTGGGCCGTGAGCTGAAAATTCTTAATCAATCAAAATACTCCTAC]
[+] EMBL AL933050 [GCAGAATCCCCGAGGTTATCGAACATCGTGTCGCTCAAGGGCGTCTGTCTCGATCCGAAAACGCTCTGCCTGGTGATGNGAGTACGCGCGGGGCGGCTCGCTCAACAAGATACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCGCGGTATGAAGTATCTGCACTGCGAGGCGCCAATCTCCGTCATCCATCGCGATTTGAAGAGCTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAAAATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGGCACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGATGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGGCTTCGACTCGCTGTCGGTAGCGTACGGTGTGGCGGTGAATACGCTCGCCTTACCGATCCCGAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACACCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTTTGCTCAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGG AAAACGGAANATCGCGGNAGTGTTGCAAGAATTGCGTAACAACAGCAAAAGGAACTACGCAGCAAAGAGGAGGAACTGACGCGAGTTCAGCAAGAGCAGCGCTACAAGGAGGAAAATCTTTGCAAAGCGAGAGCAGGAGCTGCACGCGGCGGGAAATCGAGGCTACTGGGCCGTGAGCTGAAAATTCTTAATCAATCAAAATACTCCTAC]
[+] EMBL BM605516 [ ccggGAGTACGCGCGGGGCGGCTCGCTCAACAAGATACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCGCGGTATGAAGTATCTGCACTGCGAGGCGCCAATCTCCGTCATCCATCGCGATTTGAAGAGCTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAAAATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGGCACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGATGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGGCTTCGACTCGCTGTCGGTAGCGTACGGTGTGGCGGTGAATACGCTCGCCTTACCGATCCCGAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACACCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTTTGCTCAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGGAAAAAAGGAA ATCGCGGAAGTGTTGCAAGAATTGCGTAA AAAAG AAAAGGAACTACGCAGCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7136#0 GGGCGGGGGCCACCCTATTCGACCGCAGAGCGTGCGCGCGGGACAGGGATCCAGGGCTCC 60
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 GCTCGATGTGAGAAGCGTTTGTTTTGGTCGGTACGTGGTTGCCTGGTGGTGTGCGCGGGG 120
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 CGGTGTTGTTCGTAGTATGTGCATTGGGCCGAAAGGATGTTGATGCGGTCGGGGATAGAG 180
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 CGGTCGGGCAGCCGGGAGCAGCGGGACCAGCAGCAGGACTGGGTGATGATGTCGCCCCTG 240
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 TGGACGGCCCGCTACGACTACGAGGCGCAGGGCGACGACGAGCTGTCGCTCCGGGTGGGC 300
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 CAGATCGTGTACGTGCTGTCGACCGACAGCAGCATCTCGGGCGACGAGGGCTGGTGGACG 360
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 GGCAAGATCGGGGACCGGGTGGGCATCTTTCCGTCGAACTTTGTCACGAACGAGGACCCG 420
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 GCGGTGTTGAAGGTGCAGCCGGTCGAGATCCAGTACCACGAGCTCGACCTGAAGGAGGTG 480
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 ATCGGCGTCGGGGGCTTCAGCAAGGTGCACCGCGCCTTCCTGAACGGGGAGGAGGTGGCG 540
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 GTGAAAGCGTCCCGGCAGGACGACGAGTTCGAGGTGGCGCGGCAGAACGTGCTGCAGGAG 600
consensus_7136#1 ------------------------------------------------------------
consensus_7136#0 GCGAACTGTCTCTGGTCGCTCAAGCATCCGAACATCGTGTCGCTCAAGGGCGTCTGTCTC 660
consensus_7136#1 ---------GCAGAATCCCCGAGGTTATCGAACATCGTGTCGCTCAAGGGCGTCTGTCTC 51
** * * * ********************************
consensus_7136#0 GATCCGAAAACGCTCTGCCTGGTGATGG-AGTACGCGCGGGGCGGCTCGCTCAACAAGAT 719
consensus_7136#1 GATCCGAAAACGCTCTGCCTGGTGATGNGAGTACGCGCGGGGCGGCTCGCTCAACAAGAT 111
*************************** *******************************
consensus_7136#0 ACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCG 779
consensus_7136#1 ACTGGCGGGGCGGAAGATACCACCGAACGTGCTGGTCGACTGGGCGATCCAGATCGCGCG 171
************************************************************
consensus_7136#0 TGGTATGAAGTATCTGCACTGCGAGGCCCCAATCTCCGTCATCCATCGCGATTTGAAGAG 839
consensus_7136#1 CGGTATGAAGTATCTGCACTGCGAGGCGCCAATCTCCGTCATCCATCGCGATTTGAAGAG 231
************************** ********************************
consensus_7136#0 CTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAA 899
consensus_7136#1 CTCGAACGTACTGATCAGCGAATCGATCCAGCACGGTCATCTGCTCAACAAAACGCTCAA 291
************************************************************
consensus_7136#0 AATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGG 959
consensus_7136#1 AATCACCGACTTCGGGCTGGCCCGAGAGGCGTACCGGACTACTCGAATGTCGGCAGCCGG 351
************************************************************
consensus_7136#0 CACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGA 1019
consensus_7136#1 CACCTTCGCCTGGATGCCACCGGAGGTGATCAAATCGGGAACGTACTCCAAAGCGTCCGA 411
************************************************************
consensus_7136#0 TGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGG 1079
consensus_7136#1 TGTGTGGAGCTACGGGGTGCTGCTGTGGGAATTGCTCACCGGGGAAACTCCCTACAAGGG 471
************************************************************
consensus_7136#0 CTTCGACTCGCTGTCGGTAGCGTACGGTGTAGCAGTGAATACGCTCGCCTTACCGATCCC 1139
consensus_7136#1 CTTCGACTCGCTGTCGGTAGCGTACGGTGTGGCGGTGAATACGCTCGCCTTACCGATCCC 531
****************************** ** **************************
consensus_7136#0 GAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACA 1199
consensus_7136#1 GAAAACCTGCCCCGAATCATGGGGCAAACTGATGAAATCCTGCTGGGAGATCGATCCACA 591
************************************************************
consensus_7136#0 CCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTT 1259
consensus_7136#1 CCGTAGGCCTTCGTTTAAGGATATTGAAAAGGATCTGGACATCATTGCGCGGTCCGGCTT 651
************************************************************
consensus_7136#0 TGCTCAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGGAAAAAGGAAAGA-- 1317
consensus_7136#1 TGCTCAAACGCCCCACGAATCATTCCACACGATGCAGGACGGCTGGAAAACGGAANATCG 711
************************************************** ****
consensus_7136#0 ------------------------------------------------------------
consensus_7136#1 CGGNAGTGTTGCAAGAATTGCGTAACAACAGCAAAAGGAACTACGCAGCAAAGAGGAGGA 771
consensus_7136#0 ------------------------------------------------------------
consensus_7136#1 ACTGACGCGAGTTCAGCAAGAGCAGCGCTACAAGGAGGAAAATCTTTGCAAAGCGAGAGC 831
consensus_7136#0 ------------------------------------------------------------
consensus_7136#1 AGGAGCTGCACGCGGCGGGAAATCGAGGCTACTGGGCCGTGAGCTGAAAATTCTTAATCA 891
consensus_7136#0 ----------------
consensus_7136#1 ATCAAAATACTCCTAC 907
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||