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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1056 fasta sequence
[CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAACAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTGGACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAGCTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG]
[+] EMBL BM653315 [CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAAT ]
[+] EMBL BM595768 [ ccgGCGTGTGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGGAAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGC ]
[+] EMBL BM584468 [ ccgGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCAC ]
[+] EMBL BX627725 [ GTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGTGCAGACGAGCTTACCCCCAAACACACCCACGTCACAACCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAACAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTGGACGAAACGAAGATCATAC ]
[+] EMBL BX613634 [ CAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTGTACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGCGTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAAGGTCGGACCGGAACAGTGGCCGGTGGCGACGAGCGAGGCCGCGATACAG TTCGGCACGCTGCCGGCCACGCTCAGCAAGTATCAGGACCCGCGGGAAGC GGACGCGC TCACCCGCATGCAGGAGGATCTGGACGAGACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAGCTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG]
consensusID : consensus_7208#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence
[CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA]
[+] EMBL BM643853 [CCGCCCACGCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAACAACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGTGCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTTTGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAAAACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATCATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTGCCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCCAAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTGTTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTCTCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTCGAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7208#0 CCGAGAAGTGTGTGCGTGAGCGTGTGTGTTTGCTTTGTGCTCTTTATACATTGAGCAGGG 60
consensus_7208#1 ----------------------------------------------------CCGCCCAC 8
**
consensus_7208#0 AAGGGAACGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC 120
consensus_7208#1 GCGTCCGCGATCATAACAGATTGAAAATTGGATTCCCTAGCCAGAAGGCTCAGAAACAAC 68
* *****************************************************
consensus_7208#0 AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT 180
consensus_7208#1 AACGGTCTGTGATTAATCGTTTACATTTCGTTCGATATTTCGTCGCACAGCATTACGCGT 128
************************************************************
consensus_7208#0 GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT 240
consensus_7208#1 GCGTGTGTGTATAGCGGGTTGTGTAAAGACTGCAAGTGAGGAAGAGTGTGTGTGTTATTT 188
************************************************************
consensus_7208#0 TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA 300
consensus_7208#1 TGCGTCTCTTCTCTCCTACGGTTAGCATTCCATTAACGCAGGGCCTTGAAGAAGAAGAAA 248
************************************************************
consensus_7208#0 AACAACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAACC 360
consensus_7208#1 AACCACAAACGCATCCAGCAAACAATTCGGTGGTGGAAGAGGCCTGAGGAAAACAAAATC 308
*** ****************************************************** *
consensus_7208#0 ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG 420
consensus_7208#1 ATTCCGGAACAGTGCTAAGCTAACCAGACAGCCCCCGCATCCCCAGAACAACAGTGCCTG 368
************************************************************
consensus_7208#0 CCTTTACGGATCAAACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC 480
consensus_7208#1 CCTTTACGGATCAGACGGTCTGATTGTTAAGTGCTGCTGCGAGCAGACGAGCTTACCCCC 428
************* **********************************************
consensus_7208#0 AAACACACCCACGTCACAGCCAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG 540
consensus_7208#1 AAACACACCCACGTCACAGACAACCGGGCCGAGATGGTGAAACTGTACGCCCTGAGCGTG 488
******************* ****************************************
consensus_7208#0 TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC 600
consensus_7208#1 TTCTACAAGGCGCCGACCGAGGCACGGCTCCTGAAGACGGCCTACGATCTGCAGAGCTTC 548
************************************************************
consensus_7208#0 TCCTTCTTCCAGCGCGGCTCGGTCCAGGAATTCATCAGCTTCGCCAGCAAGACGCTCGTC 660
consensus_7208#1 TCCTTCTTCCAGCGCGGATCGGTCCAGGAATTCATCAACTTCGTCAGCAAGACGCTCGTC 608
***************** ******************* ***** ****************
consensus_7208#0 GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTACATGTGCCACGTG 720
consensus_7208#1 GAGCGAACGCAGGCCGCCACCCGGCAGTCGGTCAAGCAGGACGTGTA------------- 655
***********************************************
consensus_7208#0 TACGTGCGGGCGGACAATCTGGCCGCGGTGCTGATAGCGGACCACGAGTACCCGCAGCGC 780
consensus_7208#1 ------------------------------------------------------------
consensus_7208#0 GTCGGCCACACGCTGCTCACCAAGGTGCTGGACGATTTCGCCGCGAANGTCGGACCGGAA 840
consensus_7208#1 ------------------------------------------------------------
consensus_7208#0 CAGTGGCCGGTGGCGACCAGCGAGGCCGCGATACAGTTTCGGCACGCTGCCGGCCACGCT 900
consensus_7208#1 ------------------------------------------------------------
consensus_7208#0 CAGCAAGTATCAGGACCCGCGGGAAGCGGGACGCGCNTCACCGCCATGCAGGAGGATCTG 960
consensus_7208#1 ------------------------------------------------------------
consensus_7208#0 GACGAAACGAAGATCATACTGCGCAACACGATCGAGTCCGTGCTGGAGCGGGGCGAAAAG 1020
consensus_7208#1 ------------------------------------------------------------
consensus_7208#0 CTGGACGATCTGGTGTACAAGTCGGAGTCGCTCTCG 1056
consensus_7208#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||