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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7284#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1217 fasta sequence
[AGTTAAAGTGGGCGAGTAAAACCCAGTGCTTTTCAGTTTGTTGTGGTGCTTTCTAAACATTTTTAGATAGCGCTCGTACGATAGTGTTGGAAAACGATGTTGGAAAAGTCACTAATGTTATCGAAATTCAGAGGAAGTCTGCTGGGCGCCCTGGTAGGCGATTGCTGTGGTGCACCATTCGAAGGTCAACTCATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAATCTTGACAAATTGGAAGGGCCCCCATTTAACGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAGCGGATACTCGCAAAAGCTGCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGC-GGTGGGGGAAGTGTTTCGCAAACTGCGGCAAACCAAGATCGCCGATCCGACGTGCCCCGCCATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGCCATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGCCGAGCTGAAGCAGCACATGGTCGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAACCCGAATGCGTACGAAAAACAGCTGCAAAACATGGAAACGCTGCTAGACCATCGGGTGGACCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGTCCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTGCTGAAGGATACGGATCGAAAATCGTTCCGCAATACGCTTGAGTATGCTATCTCGCTTGGTGGGGATTGTGATACGATCGGTAGCATGGCGTGCGCAATCAGTGGCGCCTACTACGGTGAGCCTGCCATTTCAAGCGCTTTGCTGAAGCACTGCGAAAGCGCTGACAGTGTTGCGGAGCTTGCGGAGCAACTGTTCCAGGTTGCCGGCACACAGTGACGTGTAAAGCATCACAGTAGCCATAGCGTGTAGTATGTAGGTGGTGTGTGGTTCAATAAACCGTTCCCCGA]
[+] EMBL CNS08SOV [AGTTAAAGTGGGCGAGTAAAACCCAGTGCTTTTCAGTTTGTTGTGGTGCTTTCTAAACATTTTTAGATAGCGCTCGTACGATAGTGTTGGAAAACGATGTTGGAAAAGTCACTAATGTTATCGAAATTCAGAGGAAGTCTGCTGGGCGCCCTGGTAGGCGATTGCTGTGGTGCACCATTCGAAGGTCAACTCATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAATCTTGACAAATTGGAAGGGCCCCCATTTAACGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAGCGGATACTCGCAAAAGCTGCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGC GGTGGGGGAAGTGTTTCGCAAACTGCGGCAAACCAAGGTCGCCGATCCGACGTGCCCCGCCATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAGCAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGCCATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGCCGAGCTGAAGCAGCACATGGTTGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAATCCGAATGCGTACGAAAAACAGCTGCAAAACATGGAAACCCTGCTAGACCATCGGGTGGACCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGTCCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTGCTGAAGGATACGGATCGAAAATCGTTCCGCAATACGCTTGAGTATGCTATCTCGCTTGGTGGGGATTGTGATACGATCGGTAGCATGGCGTGC ]
[+] EMBL BX617180 [ AAGGTCAACTAATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAATCTTGACAAATTGGAAGGGCCCCCATTTAACGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAACGGATACTCGCAAAAGCTGCTGGCAAAGAACTTTGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGC GGTGGGGGAGGTGTTTCGCAAACTACGGCAAACCAAGATCGCCGATCCGACGGGTCCCGCCATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAAGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGA ]
[-] EMBL CNS08SOW [ AGAAAAATTTTGACAAATTGG AGGGCCCCCATTTAACGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAGCGGATACTCGCAAAAGCTGCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGC GGTGGGGGAAGTGTTTCGCAAACTGCGGCAAACCAAGATCGCCGATCCGACGTGCCCCGCCATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAGCAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGCCATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGCCGAGCTGAAGCAGCACATGGTTGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAATCCCAATGCGTACGAAAAACAGCTGCAAAACATGGAAACCCTGCTAGACCATCGGGTGGACCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGTCCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTGCTGAAGGATACGGATCGAAAATCGTTCCGCAATACGCTTGAGTATGCTATCTCGCTTGGTGGGGATTGTGATACGATCGGTAGCATGGCGTGCGCGATCAGTGGCGCCTACTACGGTGAGCCTGCCATTTCAAGCGCTTTGCTGAAGCACTGCGAAAGTGCTGACAGTGTTGCGGAGCTTGCGGAGCAACTGTTCCAGGTTGCCAGCACACAGTGACGTGTAAAGCATCACAGTAGCCATAGCGTGTAGTATGTAGGTGGTGTGTGGTTCAATAAACCGTTCCCCGA]
[+] EMBL BX628235 [ TTGGAAGGGCCCCCATTTAACGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAGCGGATACTCGCAAAAGCTGCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGCGGGTGGGGGAAGTGTTTCGCAAACTGCGGCAAACCAAGATCTCCGATCCGACGGGCCCCGCCATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGCCATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGCCGAGCTGAAGCAGCACATGGTCGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAACCCGAATGCGTACGAAAAACAGCTGCAAAACATGGAAACGCTGCTAGACCATCGGGTGGACCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGTCCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTGCTGAAAGATACGGATCGAAAATCGTTCCGCAATACGCTTGAGTA ]
[+] EMBL BX611108 [ GCCATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGCCATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGCCGAGCTGAAGCAGCACATGGTCGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAACCCGAATGCGTACGAAAAACAGCTGCAAAACATGGAAACGCTGCTAGACCATCGGGTGGACCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGTCCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTTCTGAAGGATACGGATCGAAAATCGTTCCGCAATACGCTTGAGTATGCTATCTCGCTTGGTGGGGATTGTGATACGATCGGTAGCATGGCGTGCGCAATCAGTGGCGCCTACTACGGTGAGCCTGCCATTTCAAGCGCTTTGCTGAAGCACTGCGAAAGCGCTGACAGTGTTGCGGAGCTTGCGGAGCAACTGTTCCAGGTTGCCGGCACACAGTGACGTGTAAAGCATCACAGTAGCCATAGCGTGTAGTATGTAGGTGGTGTGT ]
[+] EMBL BX609346 [ GTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATCGTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGCCATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGCCGAGCTGAAGCAGCACATGGTCGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAACCCGAATGCGTACGAAAAACAGCTGCAAAACATGGAAACGCTGCTAGACCATCGGGTGGACCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGTCCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTTCTGAAGGATACGGATCGAAAATCGTTCCGCAATACGCTTGAGTATGCTATCTCGCTTGGTGGGGATTGTGATACGATCGGTAGCATGGCGTGCGCAATCAGTGGCGCCTACTACGGTGAGCCTGCCATTTCAAGCGCTTTGCTGAAGCACTGCGAAAGCGCTGACAGTGTTGCGGAGCTTGCGGAGCAACTGTTCCAGGTTGCCGGCACACAGTGACGTGTAAAGCAT ]
consensusID : consensus_7284#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence
[CCGCGGCTGTGCGCGTTAAAGTGGGCGAGTAAAACCCAGTGCTTTGCAGTTTGTTGTGGTGCTTTCTTAACATTTTTAGATAGCGTTCGCACGACAGCGCTAAAACGATGTTGGAGAAGTCACTAATGTTATCGAAATTCAGAGGAAGTCTGCTGGGCGCCCTGGTAGGCGATTGCTGTGGTGCACCATTCGAAGGTCAACTAATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAATCTTGACAAATTGGAAGGACCCCCATTTAACGGTTCGTAGCAATAGGGTTCTTTCGGATGCTGGCATAACAATCCTTTTGGTATATTTGTAGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAACGGATACTCGCAAAAGCTGCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGCGGTGGGGGAAGTGTTTTGCAAACTGCGGCAAACCAAGATCGCCGATCCGTGCCCCGCCATGGCTCAGTTCAACGGTAGTGGATCGTTCGGTAACGGTGCAGCCATGCGCATTTCTCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGACTGGTGAAGGA]
[+] EMBL BM646356 [CCGCGGCTGTGCGCGTTAAAGTGGGCGAGTAAAACCCAGTGCTTTGCAGTTTGTTGTGGTGCTTTCTTAACATTTTTAGATAGCGTTCGCACGACAGCGCTAAAACGATGTTGGAGAAGTCACTAATGTTATCGAAATTCAGAGGAAGTCTGCTGGGCGCCCTGGTAGGCGATTGCTGTGGTGCACCATTCGAAGGTCAACTAATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAATCTTGACAAATTGGAAGGACCCCCATTTAACGGTTCGTAGCAATAGGGTTCTTTCGGATGCTGGCATAACAATCCTTTTGGTATATTTGTAGCTCCGTACAAAAAGTACACGGACGATACGGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAACGGATACTCGCAAAAGCTGCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGCGGTGGGGGAAGTGTTTTGCAAACTGCGGCAAACCAAGATCGCCGATCCGTGCCCCGCCATGGCTCAGTTCAACGGTAGTGGATCGTTCGGTAACGGTGCAGCCATGCGCATTTCTCCGGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGACTGGTGAAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7284#0 -------------AGTTAAAGTGGGCGAGTAAAACCCAGTGCTTTTCAGTTTGTTGTGGT 47
consensus_7284#1 CCGCGGCTGTGCGCGTTAAAGTGGGCGAGTAAAACCCAGTGCTTTGCAGTTTGTTGTGGT 60
******************************* **************
consensus_7284#0 GCTTTCTAAACATTTTTAGATAGCGCTCGTACGATAGTGTTGGAAAACGATGTTGGAAAA 107
consensus_7284#1 GCTTTCTTAACATTTTTAGATAGCGTTCGCACGACAGCGCT--AAAACGATGTTGGAGAA 118
******* ***************** *** **** ** * * ************** **
consensus_7284#0 GTCACTAATGTTATCGAAATTCAGAGGAAGTCTGCTGGGCGCCCTGGTAGGCGATTGCTG 167
consensus_7284#1 GTCACTAATGTTATCGAAATTCAGAGGAAGTCTGCTGGGCGCCCTGGTAGGCGATTGCTG 178
************************************************************
consensus_7284#0 TGGTGCACCATTCGAAGGTCAACTCATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAA 227
consensus_7284#1 TGGTGCACCATTCGAAGGTCAACTAATGGACAGTGGAGCGAAGTTGATTTTAAAGAAAAA 238
************************ ***********************************
consensus_7284#0 TCTTGACAAATTGGAAGGGCCCCCATTTAACG---------------------------- 259
consensus_7284#1 TCTTGACAAATTGGAAGGACCCCCATTTAACGGTTCGTAGCAATAGGGTTCTTTCGGATG 298
****************** *************
consensus_7284#0 --------------------------------CTCCGTACAAAAAGTACACGGACGATAC 287
consensus_7284#1 CTGGCATAACAATCCTTTTGGTATATTTGTAGCTCCGTACAAAAAGTACACGGACGATAC 358
****************************
consensus_7284#0 GGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAGCGGATACTCGCAAAAGCT 347
consensus_7284#1 GGCAATGACGATACAAACGGCGAGAGCGCTGGTCGACCCGAACGGATACTCGCAAAAGCT 418
***************************************** ******************
consensus_7284#0 GCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGC 407
consensus_7284#1 GCTGGCAAAGAACTATGTGGTCGAATTCTTCAAAGAACCGAACCGCGGATACGGAGCAGC 478
************************************************************
consensus_7284#0 GGTGGGGGAAGTGTTTCGCAAACTGCGGCAAACCAAGATCGCCGATCCGACGTGCCCCGC 467
consensus_7284#1 GGTGGGGGAAGTGTTTTGCAAACTGCGGCAAACCAAGATCGCCGATCCG---TGCCCCGC 535
**************** ******************************** ********
consensus_7284#0 CATGGCTCAGTTCAACGGTAGTGGCTCGTTCGGTAACGGTGCAGCCATGCGCATTTCCCC 527
consensus_7284#1 CATGGCTCAGTTCAACGGTAGTGGATCGTTCGGTAACGGTGCAGCCATGCGCATTTCTCC 595
************************ ******************************** **
consensus_7284#0 GGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGGCTGGTGAAGGAATC 587
consensus_7284#1 GGTCGCACTGTACTGCGTGAACAAGAGCATCGACGAGCTGGTCCGACTGGTGAAGGA--- 652
********************************************* ***********
consensus_7284#0 GTCTGAGATAACGCACACCAACGTGCTTGGTGTGAACGGGGCGATTCTGCAGGCGTTGGC 647
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 CATCCGGCAGAGCTTACTGTTGAATCCGAACGAACCGTTCTGCTGGAAAGCATTTCTTGC 707
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 CGAGCTGAAGCAGCACATGGTCGAGATAGAAAAGGGAAACGATCCCGACCTGGATGCAAA 767
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 CCCGAATGCGTACGAAAAACAGCTGCAAAACATGGAAACGCTGCTAGACCATCGGGTGGA 827
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 CCCGTCGGACGAGAATGTGCTGAACCTGTTGGGACACAGCGTGGCAGCGCTGTACTCCGT 887
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 CCCCACGGCAGTGTACTGCTTCCTGCGGCACACGCAAGACCTGCTGAAGGATACGGATCG 947
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 AAAATCGTTCCGCAATACGCTTGAGTATGCTATCTCGCTTGGTGGGGATTGTGATACGAT 1007
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 CGGTAGCATGGCGTGCGCAATCAGTGGCGCCTACTACGGTGAGCCTGCCATTTCAAGCGC 1067
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 TTTGCTGAAGCACTGCGAAAGCGCTGACAGTGTTGCGGAGCTTGCGGAGCAACTGTTCCA 1127
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 GGTTGCCGGCACACAGTGACGTGTAAAGCATCACAGTAGCCATAGCGTGTAGTATGTAGG 1187
consensus_7284#1 ------------------------------------------------------------
consensus_7284#0 TGGTGTGTGGTTCAATAAACCGTTCCCCGA 1217
consensus_7284#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||