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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7326#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1091 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGCTTAACTCACCTGGATTGACTCACCACGAAAGTTTCTGTGCTCTGACGATGTTAAAATTTGCGAGAACAATAGTGAATTGCTGTGATTATTGAAAATTTGTAAAAATATTCTTTTTTTTTTAAACAAACAAAACCTTACCCTCTACATGAATCAAAGCTTAAGTTAATGAATTCCGCTGACTGTGTACAAATGCTCCCAGTGTATGTAAAAGTAAAGGCTTTATACTAGTATGCGTACTCTCTAAATCTTGTCATTATCCTGTGTCAACTTGTAAACATCACGAATCGATTATTACCAAATCGGGTTTAGCTTATTTAATAATGTATTATAGTTGAGTTTCTTGCTACATTTTCTCTAGCAACGATAACAACTACACAACCGCCATAACACAGGTAGTACGCTCATCGAGAGAAGGGAGAGAGAGAGCAATTACTTAAACGGGTCAGAATTGATTACGGACGGCAACTTATGTGCGAATAAAACGTGTAAAGACTTAATTTCACAACAAAAAATAAGGATTTCGTCGTGAAATATAAAGAATTAATTATGAATTGTGTATGAATCTGCATGAGCATCCCAACAGTTACGGGTAGTGGATGAACATAGGATGGTTTCTTATGCACCTCCAAAAGGGATAAAATCAAGGTGCATAACAAGTAATCAATAGCAGCACGAAATGGAATTTAGTCTTACAAAAAAAAGTTAATTTAAACACAACACCCAGTCTACAGTCCACGTTAAGTGTATCTTTTCCATCGTGCACACACGGCCGCTAAAACACTGGTAACTCACTGATCCCGTACTAATGAGAAATGTTAAATGTTAGCTGAAGCTGGTGAAGAAACATCCAAACGGGTGCCTGATATTTTGTAAATTGNATTTTTTCCCCTTTTTAATTTTGCAAAGTATGGTTGCATGTAGAANGAGAGGCATATTCTCAATCCCTTAGGGCAAGTGTGTAAAGTAAACAGAAAAACCGAGACATCACTGATCATTAATCNATAACTTACGTAGAGAAGCACGCCCAAACTCTCTGCNAAGCGATGTGTAATANACTACCAC]
[+] EMBL BM643468 [CCGCCCACGCGTCCGCCCACGCGTCCGGCTTAACTCACCTGGATTGACTCACCACGAAAGTTTCTGTGCTCTGACGATGTTAAAATTTGCGAGAACAATAGTGAATTGCTGTGATTATTGAAAATTTGTAAAAATATTCTTTTTTTTTTAAACAAACAAAACCTTACCCTCTACATGAATCAAAGCTTAAGTTAATGAATTCCGCTGACTGTGTACAAATGCTCCCAGTGTATGTAAAAGTAAAGGCTTTATACTAGTATGCGTACTCTCTAAATCTTGTCATTATCCTGTGTCAACTTGTAAACATCACGAATCGATTATTACCAAATCGGGTTTAGCTTATTTAATAATGTATTATAGTTGAGTTTCTTGCTACATTTTCTCTAGCAACGATAACAACTACACAACCGCCATAACACAGGTAGTACGCTCATCGAGAGAAGGGAGAGAGAGAGCAATTACTTAAACGGGTCAGAATTGATTACGGACGGCAACTTATGTGCGAATAAAACGTGTAAAGACTTAATTTCACAACAAAAAATAAGGATTTCGTCGTGAAATATAAAGAATTAATTATGAATTGTGTATGAATCTGCATGAGCATCCCAACAGTTACGGGTAGTGGATGAACATAGGATGGTTTCTTATGCACCTCCAAAAGGGATAAAATCAAG ]
[+] EMBL BM613212 [ ccgAGTGAATTGCTGTGATTATTGAAAATTTGTAAAAATATTCTTTTTTTTTTAAACAAACAAAACCTTACCCTCTACATGAATCAAAGCTTAAGTTAATGAATTCCGCTGACTGTGTACAAATGCTCCCAGTGTATGTAAAAGTAAAGGCTTTATACTAGTATGCGTACTCTCTAAATCTTGTCATTATCCTGTGTCAACTTGTAAACATCACGAATCGATTATTACCAAATCGGGTTTAGCTTATTTAATAATGTATTATAGTTGAGTTTCTTGCTACATTTTCTCTAGCAACGATAACAACTACACAACCGCCATAACACAGGTAGTACGCTCATCGAGAGAAGGGAGAGAGAGAGCAATTACTTAAACGGGTCAGAATTGATTACGGACGGCAACTTATGTGCGAATAAAACGTGTAAAGACTTAATTTCACAACAAAAAATAAGGATTTCGTCGTGAAATATAAAGAATTAATTATGAATTGTGTATGAATCTGCATGAGCATCCCAACAGTTACGGGTAGTGGATGAACATAGGATGGTTTCTTATGCACCTCCAAAAGGGATAAAATCAAGGTGCATAACAAGTAATCAATAGCAGCACGAAATGGAATTTAGTCTTACAAAAA ]
[+] EMBL BX622445 [ TTACCCTCTACATGAATCAAAGCTTAAGTTAATGAATTCCGCTGACTGTGTACAAATGCTCCCAGTGTATGTAAAAGTAAAGGCTTTATACTAGTATGCGTACTCTCTAAATCTTGTCATTATCCTGTGTCAACTTGTAAACATCACGAATCGATTATTACCAAATCGGGTTTAGCTTATTTAATAATGTATTATAGTTGAGTTTCTTGCTACATTTTCTCTAGCAACGATAACAACTACACAACCGCCATAACACAGGTAGTACGCTCATCGAGAGAAGGGAGAGAGAGAGCAATTACTTAAACGGGTCAGAATTGATTACGGACGGCAACTTATGTGCGAATAAAACGTGTAAAGACTTAATTTCACAACAAAAAATAAGGATTTCGTCGTGAAATATAAAGAATTAATTATGAATTGTGTATGAATCTGCATGAGCATCCCAACAGTTACGGGTAGTGGATGAACATAGGATGGTTTCTTATGCACCTCCAAAAGGGATAAAATCAAGGTGCATAACAAGTAATCAATAGCAGCACGAAATGGAATTTAGTCTTACAAAAAAAAGTTAATTTAAACACAACACCCAGTCTACAGTCCACGTTAAGTGTATCTTTTCCATCGTGCACACACGGCCGCTAAAACACTGGTAACTCACTGATCCCGTACTAATGAGAAATGTTAAATGTTAGCTGAAGCTGGTGAAGAAACATCCAAACGGGTGCCTGATATTTTGTAAATTGNATTTTTTCCCCTTT ]
[+] EMBL BX622411 [ ATGTATTATAGTTGAGTTTCTTGCTACATTTTCTCTAGCAACGATAACAACTACACAACCGCCATAACACAGGTAGTACGCTCATCGAGAGAAGGGAGAGAGAGAGCAATTACTTAAACGGGTCAGAATTGATTACGGACGGCAACTTATGTGCGAATAAAACGTGTAAAGACTTAATTTCACAACAAAAAATAAGGATTTCGTCGTGAAATATAAAGAATTAATTATGAATTGTGTATGAATCTGCATGAGCATCCCAACAGTTACGGGTAGTGGATGAACATAGGATGGTTTCTTATGCACCTCCAAAAGGGATAAAATCAAGGTGCATAACAAGTAATCAATAGCAGCACGAAATGGAATTTAGTCTTACAAAAAAAAGTTAATTTAAACACAACACCCAGTCTACAGTCCACGTTAAGTGTATCTTTTCCATCGTGCACACACGGCCGCTAAAACACTGGTAACTCACTGATCCCGTACTAATGAGAAATGTTAAATGTTAGCTGAAGCTGGTGAAGAAACATCCAAACGGTTGCCTGATATTTTGTAAATTGTATTTTTTCCCCTTTTTAATTTTGCAAAGTATGGTTGCATGTAGAANGAGAGGCATATTCTCAATCCCTTAGGGCAAGTGTGTAAAGTAAACAGAAAAACCGAGACATCACTGATCATTAATCNATAACTTACGTAGAGAAGCACGCCCAAACTCTCTGCNAAGCGATGTGTAATANACTACCAC]
consensusID : consensus_7326#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 673 fasta sequence
[CGTTATACAAATAAGTGACATAGCGAAATGAACTAATAACAACAGGTCCATGCATAATACAAAAAGAAAAAGGAACAGTAACAATTCGAATCCCAAGCGGAGTGAATAATGCAATGCAAATAGCGATCTCATGGCATGATGAGGTATGAGAATGGCAATTATAAATCAAAGAGTTTTGTAGGATGAATGAGGCAGCTGCTGTACACGATAAAGGGGGGCGGCGTTAGGGAGATGTGTCAGGCACACGGAAAAATGGTGGACGCGCTTCCATTTAGTATAGATGCGTTATGGGGCTAATCCTATCCACGAATAGATTGAAACGAATGTTCTGCAGGAAACAATAGGAAAAGAAGAAAACGATGCAACAAATACAAATCTTCTTCATAATCCACAAAAAAGAGTGTGTACGGTATAGAGAAATGTATTCTTTCGCCTTGTAGACGGGGTGTAGAAATCATAATAACAAACTCTCTTCTCCCCCCTTTTACGCTTAACTCACCTGGATTGACTCACCACGAAAGTTTCTGTGCTCTGACGATGTTAAAATTTGCGAGAACNATAGTGAATTGCTGTGATTATTGAAAATTTGTAAAAATATTCTTTTTTTTTTTAAACAAACAAAACCTTACCCTCTACATGAATCAAAGCTTAAGTTAATGAATTCCCGCTGACT]
[-] EMBL AGA280908 [CGTTATACAAATAAGTGACATAGCGAAATGAAGTAATAACAACAGGTCCATGCATAATACAAAAAGAAAAAGGAACAGTAACAATTCGAATCCCAAGCGGAGTGAATAATGCAATGCAAATAGCGATCTCATGGCATGATGAGGTATGAGAATGGCAATTATAAATCAAAGAGTTTTGTAGGATGAATGAGGCAGCTGCTGTACACGATAAAGGGGGGCGGCGTTAGGGAGATGTGTCAGGCACACGGAAAAATGGTGGACGCGCTTCCATTTAGTATAGATGCGTTATGGGGCTAATCCTATCCACGAATAGATTGAAACGAATGTTCTGCAGGAAACAATAGGAAAAGAAGAAAACGATGCAACAAATACAAATCTTCTTCATAATCCACAAAAAA ]
[+] EMBL BX618525 [ gAAGGGACATAGCGAAATGAACTAATAACAACAGGTCCACGCATAATACAAAAAGAAAAAGGAACAGTAACAATGCGAAACCCAAGCGGAGGGAATAATGCAAGGCAAAT ]
[+] EMBL BX621038 [ GACATAGCGAAATGAACTAATAACAACAGGTCCATGCATAATACAAAAAGAAAAAGGAACAGTAACAATTCGAATCCCAAGCGGAGTGAATAATGCAATGCAAATAGCGATCTCATGGCATGATGAGGTATGAGAATGGCAATTATAAATCAAAGAGTTTTGTAGGATGAATGAGGCAGCTGCTGTACACGATAAAGGGGGGCGGCGTTAGGGAGATGTGTCAGGCACACGGAAAAATGGTGGACGCGCTTCCATTTAGTATAGATGCGTTATGGGGCTAATCCTATCCACGAATAGATTGAAACGAATGTTCTGCAGGAAACAATAGGAAAAGAAGAAAACGATGCAACAAATACAAATCTTCTTCATAATCCACAAAAGTGAGTGTGTACGGTATAGAGAAATGTATTCTTTCGCCTTGTAGACGGGGTGTAGAAATCATAATAACAAACTCTCTTCTCCCCCCTTTTACGCTTAACTCACCTGGATTGACTCACCACGAAAGTTTCTGTGCTCTGACGATGTTAAAATTTGCGAGAACNATAGTGAATTGCTGTGATTATTGAAAATTTGTAAAAATATTCTTTTTTTTTTTAAACAAACAAAACCTTACCCTCTACATGAATCAAAGCTTAAGTTAATGAATTCCCGCTGACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7326#0 CCGCCCACGCGTCCGCCCACGCGTCCGGCTTAACTCACCTGGATTGACTCACCACGAAAG 60
consensus_7326#1 ------------------------------------------------------------
consensus_7326#0 TTTCTGTGCTCTGACGATGTTAAAATTTGCGAGAACAATAGTGAATTGCTGTGATTATTG 120
consensus_7326#1 ------------------------------------------------------------
consensus_7326#0 AAAATTTGTAAAAATATTCTTTTTTTTTTAAACAAACAAAACCTTACCCTCTACATGAAT 180
consensus_7326#1 ------------------------------------------------------------
consensus_7326#0 CAAAGCTTAAGTTAATGAATTCCGCTGACTGTGTACAAATGCTCCCAGTGTATGTAAAAG 240
consensus_7326#1 ------------------------------------------------------------
consensus_7326#0 TAAAGGCTTTATACTAGTATGCGTACTCTCTAAATCTTGTCATTATCCTGTGTCAACTTG 300
consensus_7326#1 ------------------------------------------------------------
consensus_7326#0 TAAACATCACGAATCGATTATTACCAAATCGGGTTTAGCTTATTTAATAATGTATTATAG 360
consensus_7326#1 ------------------------------------------------------------
consensus_7326#0 TTGAGTTTCTTGCTACATTTTCTCTAGCAACGATAACAACTACACAACCGCCATAACACA 420
consensus_7326#1 ---------------CGTTATACAAATAAGTGACA-TAGCGAAATGAAC-TAATAACAAC 43
* ** * * * ** * * * * * * * ******
consensus_7326#0 GGTAGTACGCTCATCGAGAGAAGGGAGAGAGAGAGCAATTACTTAAA--CGGGTCAGAAT 478
consensus_7326#1 AGGTCCATGCATAATACAAAAAGAAAAAGGAACAGTAACAATTCGAATCCCAAGCGGAGT 103
* * ** * * *** * ** * ** ** * * ** * * ** *
consensus_7326#0 TGATTACGGACGGCAACTTATGTGCGAATAAAACGTGTAAAGACTTAATTTCACAACAAA 538
consensus_7326#1 GAATAATGCAATGCAAATAGCGATCTCATGGCATG-ATGAGGTATGAGAATGGCAATTAT 162
** * * * **** * * * ** * * * * * * * * *** *
consensus_7326#0 AAAT--AAGGATTTCGTCGTGAAATATAAAGAATTAATTATGAATTGTGTATGAAT-CTG 595
consensus_7326#1 AAATCAAAGAGTTTTGTAG-GATGAATGAGGCAGCTGCTGTACACGATAAAGGGGGGCGG 221
**** *** *** ** * ** ** * * * * * * * * * * *
consensus_7326#0 CAT--GAGCATCCCAACAGTTAC--GGGTAGTGGATGAACATAGGATGGTTTCTTATGCA 651
consensus_7326#1 CGTTAGGGAGATGTGTCAGGCACACGGAAAAATGGTGGACGCGCTTCCATTTAGTATAGA 281
* * * * *** ** ** * * ** ** *** *** *
consensus_7326#0 CCTCCAAAAGGGATAAAATCAAG-GTGCATAACAAGTAATCAATAG-CAGCACGAAATGG 709
consensus_7326#1 TGCGTTATGGGGCTAATCCTATCCACGAATAGATTGAAACGAATGTTCTGCAGGAAACAA 341
* *** *** * * *** * ** *** * *** ****
consensus_7326#0 AATTTAGTCTTACAAAAAAAAGTTAATTTAAACACAACACCCAGTCTACAGTCCACGTTA 769
consensus_7326#1 ----TAGGAAAAGAAGAAAACGATGCAACAAATACAA-ATCTTCTTCATAATCCACA--A 394
*** * ** **** * * *** **** * * * * * ***** *
consensus_7326#0 AGTGTATCTTTTCCATCGTGCACACACGGCCGCTAAAACACTGGTAACTCACTGATCCCG 829
consensus_7326#1 AAAAGAGTGTGTACGGTATAGAGAAATGTATTCTTTCGCCTTGTAGACGGGGTG------ 448
* * * * * * * * * * ** * ** ** **
consensus_7326#0 TACTAATGAGAAATGTTAAATGTTAGCTGAAGCTGGTGAAGAAACATCCAAACGGGTGCC 889
consensus_7326#1 TAGAAATCATAATAACAAACTCTCTTCTCCCCCCTTTTACGCTTAACTCACCTGGAT--- 505
** *** * ** ** * * ** * * * * * ** ** *
consensus_7326#0 TGATATTTTGTAAATTGNATTTTTTCCCCTTTTTAATTTTGCAAAGTATGGTTGCAT--G 947
consensus_7326#1 TGACTCACCACGAA---AGTTTCTGTGCTCTGACGATGTTAAAATTTGCGAGAACNATAG 562
*** ** *** * * * ** ** ** * * * *
consensus_7326#0 TAGAANGAGAGGCATATTCTCAATCCCTTAGGGCAAG--TGTGTAAAGTAAACAGAAAAA 1005
consensus_7326#1 TGAATTGCTGTGATTATTGAAAATTTGTAAAAATATTCTTTTTTTTTTTAAACAAACAAA 622
* * * * **** *** * * * * * * ****** * ***
consensus_7326#0 CCGAGACATCACTGATCATTAATCNATAACTTACGTAGAGAAGCACGCCCAAACTCTCTG 1065
consensus_7326#1 ACCTTAC-CCTCTA--CATGAATCAA-AGCTTAAGTTAATGAATTCCCGCTGACT----- 673
* ** * ** *** **** * * **** ** * * * * * ***
consensus_7326#0 CNAAGCGATGTGTAATANACTACCAC 1091
consensus_7326#1 --------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||