cluster # 7357

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Anopheles gambiae
cluster # 7357 cluster # 7357 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7357#0 length = 621 sequences # 1

consensus_7357#1 length = 620 sequences # 6

consensusID : consensus_7357#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence

                              [CCGCCCACGCGTCCGAAATAAACAATTATCAAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCACGGAGAGGATCAGTCCGACGAGAAGCTTATGCAAGAGGCGAAGAAGATTGGGTTTCCGTTAATGATCAAGGCAGTTCGCG]

[+] EMBL BM602221             [CCGCCCACGCGTCCGAAATAAACAATTATCAAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCACGGAGAGGATCAGTCCGACGAGAAGCTTATGCAAGAGGCGAAGAAGATTGGGTTTCCGTTAATGATCAAGGCAGTTCGCG]




>consensus_7357#0
CCGCCCACGCGTCCGAAATAAACAATTATCAAAATAACGACGAAACCAAAATGCTGCACA
AAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCC
AAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGT
GTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATG
CGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCG
CTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTT
GTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGT
GCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTA
TTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATC
ACGGAGAGGATCAGTCCGACGAGAAGCTTATGCAAGAGGCGAAGAAGATTGGGTTTCCGT
TAATGATCAAGGCAGTTCGCG

consensusID : consensus_7357#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 620
fasta sequence

                              [CCGCGGACGCGTCCGATTCCGCATGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTGCTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCAC-GGAGAGGATCAGTCCGACGAGAAGCTT]

[+] EMBL BM657292             [CCGCGGACGCGT  GGGTCCGCATGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTGCTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACAGCAAACCGTCTTGGCATTCGTACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTTTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCACGGGAGAGGATCAGTCCGACGAGAAGCTT]
[+] EMBL BM656214             [CCGCCCACGCGTCCGATTCCGCATGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTGCTGTAAATAAACAATTATCAGCAAATAACGACCAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCATAAGGTGGTGCATCGTCTGATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCCTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTATCAAAC                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM601793             [       ccgGTCACATTCCGCATGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTGCTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCAC GGAGAGGATCAGTCCGACGAG      ]
[+] EMBL BM649076             [                cgaccCACGCGT CC GTCTACCTGTTGCGCTGTCCCTGTAGT CTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCAC GGA                        ]
[+] EMBL BM609234             [                     ccgGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTGCTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAACAGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTATTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAGAACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCACCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCAC GGA                        ]
[+] EMBL BM649023             [                            ccgAATCTACCTGTTGCGCTGTCCCTGTAGTGCTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGACCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGGTGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGATGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAAAATCACTCCA                                                                                                                                                                                                                                                                                                                       ]




>consensus_7357#1
CCGCGGACGCGTCCGATTCCGCATGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTG
CTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGA
CCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGG
TGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGA
TGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAA
AATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAAC
AGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTA
TTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAG
AACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCA
CCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCACGGAGAGG
ATCAGTCCGACGAGAAGCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7357#0      -------------------------------------------------CCGCCCACGCG 11
consensus_7357#1      CCGCGGACGCGTCCGATTCCGCATGCGTGCCAATCTACCTGTTGCGCTGTCCCTGTAGTG 60
                                                                        * *    * *

consensus_7357#0      TCCGAAATAAACAATTATCA--AAATAACGACGAAACCAAAATGCTGCACAAAATGCAGA 69
consensus_7357#1      CTGTAAATAAACAATTATCAGCAAATAACGACGAAACCAAAATGCTGCACAAAATGCAGA 120
                          ****************  **************************************

consensus_7357#0      CCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGG 129
consensus_7357#1      CCATGGCCTCGTGGTCCCGTCGTTTCGCAACCACTTGCAGCAATGCCAGCCAAAAGGTGG 180
                      ************************************************************

consensus_7357#0      TGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGA 189
consensus_7357#1      TGCATCGTCAAATCAACAAACTGTTGATAGCCAACAGGGGAGAAATTGCGTGTCGTGTGA 240
                      ************************************************************

consensus_7357#0      TGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAA 249
consensus_7357#1      TGAGGACGGCAAACCGTCTTGGCATTCGCACTGTTGCTGTTTTTTCCGATGCGGATGAAA 300
                      ************************************************************

consensus_7357#0      AATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAAC 309
consensus_7357#1      AATCACTCCACGTAAAGCTAGCAAACGAAGCATACAACATTGGCCCGGCCGCTTCGCAAC 360
                      ************************************************************

consensus_7357#0      AGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTA 369
consensus_7357#1      AGTCGTACCTTCGTGGCGATAAAATTCTGGCAGTTGCCAAGAAGGCCGGTTGTCAAGCTA 420
                      ************************************************************

consensus_7357#0      TTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAG 429
consensus_7357#1      TTCACCCCGGATACGGATTCTTATCGGAAAATGTGGAGTTTGCGGAACTGTGCCAACAAG 480
                      ************************************************************

consensus_7357#0      AACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCA 489
consensus_7357#1      AACAAGTTACGTTCATCGGTCCGCCGGCAAGTGCCATTCGAGACATGGGTATTAAGAGCA 540
                      ************************************************************

consensus_7357#0      CCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCACGGAGAGG 549
consensus_7357#1      CCTCCAAACACATCATGTCTGCTGCTGGCGTACCGATCATCAACGGTTATCACGGAGAGG 600
                      ************************************************************

consensus_7357#0      ATCAGTCCGACGAGAAGCTTATGCAAGAGGCGAAGAAGATTGGGTTTCCGTTAATGATCA 609
consensus_7357#1      ATCAGTCCGACGAGAAGCTT---------------------------------------- 620
                      ********************                                        

consensus_7357#0      AGGCAGTTCGCG 621
consensus_7357#1      ------------