cluster # 7395

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Anopheles gambiae
cluster # 7395 cluster # 7395 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7395#0 length = 764 sequences # 6

consensus_7395#1 length = 191 sequences # 1

consensusID : consensus_7395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 764
fasta sequence

                              [TACGGCGGCAGGTTGTTCAGTTCCCCCTTGATTTTAGCTGCCGCAACAACACAGCAGCATTTCCTTACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATA----ACACACACACACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGCTCCCCTGC------TGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTACTACACCATGCGCGAGCGGCTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAAGACAA-GGAGCAGATTGTGGCCAACTTTGGTGGCGAAACGGCGCGCGAAGAGTTGAANGGTGCGATCGGGGAAATTTCCAAGCTGAAGTATGAGCTGCAGACGGATAANGACTTTCGCCCGATAAAGACNGCGCTCGGGGACGANACGGTGTGGAACAGCTTTCT]

[+] EMBL BX628196             [TACGGCGGCAGGTTGTTCAGTTCCCCCTTGATTTTAGCTGCAGCAACAACACAGCAGCATTTCCTCACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCGTGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATA    ACACACACACACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGCTCCCCTGC      TGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTACTACACCATGCGCGAGCGACTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAGGACAA GGAGCAGATTGTGGCCAACTTTGGTGGCGAAACGGCGCGCGAAGAGTTGAANGGTGCGATCGGGGAAATTTCCAAGCTGAAGTATGAGCTGCAGACGGATAANGACTTTCGCCCGATAAAGACNGCGCTCGGGGACGANACGGTGTGGAACAGCTTTCT]
[+] EMBL BM622343             [                                        CCGCAACAACACAGCAGCATTTCCTTACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATA    ACACACACACACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGCTCCCCTGC      TGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTACTACACCATGCGCGAGCGGCTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAAGACAA GGAGCAGATTGTGGCCAACTTTGGTGGCGAAACGGCGCGCGAAGAGTTGAAGGGTGCGATCGGGGAAATTTCCAAGCT                                                                                 ]
[+] EMBL BM656453             [                                        CCGCAACAACACAGCAGCATTTCCTTACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATA    ACACACACACACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGCTCCCCTGC      TGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTACTACACCATGCGCGAGCGGCTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAAGACAA GGAGCAGATTGT                                                                                                                                                   ]
[+] EMBL BM595734             [                                                                     ccgGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAATTATCATACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCGTGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATAACACACACACACACACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGCTCCCCTGCTGCTGTTGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTACTACACCATGCGCGAGCGACTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAGGA                                                                                                                                                                   ]
[+] EMBL BX626605             [                                                                          AGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATA    ACACACACACACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGCTCCCCTGC      TGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTACTACACCATGCGCGAGCGGCTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAAGACAAGGGAGCAGATTGTGGCCAACTTTGGTGGCGAAACGGCGCGCGAAGAGTTGAANGGTGCGATCGGGGAAATTTCCAAGCTGAAGTATGAGCTGCAGACGGATAANGACTTTCGCC                                              ]
[+] EMBL BM580016             [                                                                              ccgCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGTCATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATA    ACACACACACACCGGGGAAAGGAGCGGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_7395#0
TACGGCGGCAGGTTGTTCAGTTCCCCCTTGATTTTAGCTGCCGCAACAACACAGCAGCAT
TTCCTTACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTT
ATCACAATAAACATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGCTGCGTAAGCGT
CATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATAACACACACACAC
CGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTATGC
TCCCCTGCTGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACAAAT
CATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGTGCT
CGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATCATC
GATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGTTAC
TACACCATGCGCGAGCGGCTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCCAAA
GACAAGGAGCAGATTGTGGCCAACTTTGGTGGCGAAACGGCGCGCGAAGAGTTGAANGGT
GCGATCGGGGAAATTTCCAAGCTGAAGTATGAGCTGCAGACGGATAANGACTTTCGCCCG
ATAAAGACNGCGCTCGGGGACGANACGGTGTGGAACAGCTTTCT

consensusID : consensus_7395#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 191
fasta sequence

                              [AGGCAGAATTGCGTACGAGGGGTAACAACACAGCAGCATTTCTCACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAAGCATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGACTGCGTAAGCGCTCGTGCGATCCAATCGACTGTATCGAACGTA]

[+] EMBL BX466238             [AGGCAGAATTGCGTACGAGGGGTAACAACACAGCAGCATTTCTCACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAAGCATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGACTGCGTAAGCGCTCGTGCGATCCAATCGACTGTATCGAACGTA]




>consensus_7395#1
AGGCAGAATTGCGTACGAGGGGTAACAACACAGCAGCATTTCTCACCGAAGCAGCATCTC
CAATCCATCCGAATCCATAAAGTGTTTACACGAAACTTATCACAATAAAGCATCACACTA
TCTGCCTGTGTACCTTCGCCTTATCTGACTGCGTAAGCGCTCGTGCGATCCAATCGACTG
TATCGAACGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7395#0      TACGGCGGCAGGTTGTTCAGTTCCCCCTTGATTTTAGCTGCCGCAACAACACAGCAGCAT 60
consensus_7395#1      -------------------AGGCAGAATTG--CGTACGAGGGGTAACAACACAGCAGCAT 39
                                            *    ***    **   *  * ****************

consensus_7395#0      TTCCTTACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTT 120
consensus_7395#1      TTC-TCACCGAAGCAGCATCTCCAATCCATCCGAATCCATAAAGTGTTTACACGAAACTT 98
                      *** * ******************************************************

consensus_7395#0      ATCACAATAAA-CATCACACTATCTGCCTGTGTACCTTCGCCTTATCTG-CTGCGTAAGC 178
consensus_7395#1      ATCACAATAAAGCATCACACTATCTGCCTGTGTACCTTCGCCTTATCTGACTGCGTAAGC 158
                      *********** ************************************* **********

consensus_7395#0      G-TCATGCGATCCAATCGACTGTATCGAACGTAAAGTCGTTTCACAGCATAACACACACA 237
consensus_7395#1      GCTCGTGCGATCCAATCGACTGTATCGAACGTA--------------------------- 191
                      * ** ****************************                           

consensus_7395#0      CACCGGGGAAAGGAGCGGTTCTAAAAATAGTGCACACTGTTGTGTGGGGTGCTTAATTTA 297
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      TGCTCCCCTGCTGCTGTTGCTGCTAGATCTGAAACAAGGCAACCTGCGATCGTTGAGACA 357
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      AATCATAGCTGGAGTAGTGTTAGCGCTGCTGCAAGCGAAGCAATTTCTGCGTAACTTTGT 417
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      GCTCGAAGAAGTCGTTCCTCTGCTTCTACAATGACCGACCTAACGACCAAGTACAATATC 477
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      ATCGATGAAAAGCCACCCTTTAACGCACCGTTGAAGGGACAATACAAGCAGGGCTTCGGT 537
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      TACTACACCATGCGCGAGCGGCTGCCCGTCATCCTGACGCAGGTGATTGATCAGCTGTCC 597
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      AAAGACAAGGAGCAGATTGTGGCCAACTTTGGTGGCGAAACGGCGCGCGAAGAGTTGAAN 657
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      GGTGCGATCGGGGAAATTTCCAAGCTGAAGTATGAGCTGCAGACGGATAANGACTTTCGC 717
consensus_7395#1      ------------------------------------------------------------
                                                                                  

consensus_7395#0      CCGATAAAGACNGCGCTCGGGGACGANACGGTGTGGAACAGCTTTCT 764
consensus_7395#1      -----------------------------------------------