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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7445#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1352 fasta sequence
[CCGCTTAACGCCCTCCTTTGCAGACGATGACGAGGTGGCGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGAACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGATGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGGCGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGATGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCCAAAACCTGTACAAGAAGTACTGCCAGCTGAACAGCCTGTCCACGCTGAAGGACATCCACTCGCAGGAGGACGACTTCC--T-GTCGCA--GGCCGAGC-TGGCGCTGCGCGAAGCGCTTCAGCTCGGCAACCTGGACGCCTCGATACC-GGACATCAGTGGCAACTA-CCGCAAGGCGGGCAAGCCGGTCGAGGCCGACCTGGCGGACGAGACGAAGAAGCTGATCCGGCACCAGAAGCTGCTGCAGGACAAGTACCAGAAGGAC-TTCTTCGGGCTGGCGCTGCACGCGATGGTGCGCAAGCTGCTGCAGCTCGGGGACCAGCGGTACGCGGAGAAGCTCAAGAGCGAGTTCCGCATGTCCGACCGGCGCTTCTGGTGGCTGCGGGTGCAGACGTACGCGGACAACTACCAGTGGGAGGAGCTGGAGAAGCTCGGCCGGGCGAAGAAGAGCGCGATCGGGTACGAACCGTTCGTCGAGGTGTGCCTGGCGAAGCAGAACGTGACCGAGGCGAAAAAGTATCTGCCCCGGTGCGGCGAGGAAACGAAGCTGAAGTGGTATCTGCGGGCGGGTTGCTATGCCGATGCGGCGACCATCGCGTTCATGCAGAAGGACATCGACAGCTTGCTGAAGATTCACGACCACTGCAACGATTCCGCGCTGATGGCAAAGGTCGAAAACATGATCGGGCAGCTGTCCAGCAAGAAATAATGCGAGTCAGAAAAGGGCGAGGCGTGTTGAACCGTGATATCAGATAGACGCGAAGGATATATTAGTATATGTGTGTATGTGTTTTTTTATAAGTTTATATCTTTATATGTTTTGTAATCATCATTGTGCAGCCAAAGTGCTCCCGGTAGTAGGTTAAGGTTTAGCAAGCAAGCATGTGTAAATGTTATTACTCCATTCCCTTTTCGCTCGCAGTAGACTCACCAACGCTGTCAGCAGACAATTAGAGCTAGCGAGTACAGTACAGTTCAGTGTAATATCGAAGCGAATATACGCCGCAAAAGTAANGAATCAA]
[+] EMBL BM605837 [CCGCTTAACGCCCTCCTTTGCAGACGATGACGAGGTGGCGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGAACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGATGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGGCGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGATGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCCAAAACCTGTACAAGAAGTACTGCCAGCTGAACAGCCTGTCCACGCTGAAGGACATCCACTCGCAGGAGGACGACTTCC T GTCGCA GGCCGAGC TGGCGCTGCGCGAAGCGCTTCAGCTCGGCAACCTGGACGCCTCGATACC GGACATCAGTGGCAACTA CCGCAAGGCGGGCAAGCCGGTCGAGGCCGACCTGGCGGACGAGACGAAGAAGCTGATCCGGCACCAGAAGCTGCTGCAGGACAAGTACCAGAAGGAC TTCTTCGGGCTGGCGCTGCACGCGATGGTGCGCAAGCTGCTGCAGCTCGGGGACCAGCGGTACGCGGAGAAGCTCAAGAGCGAGTTCCGCATGTCCGACCGGCG ]
[+] EMBL BM586044 [CCGCTTAACGCCCTCCTTTGCAGACGATGACGAGGTGGCGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGAACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGATGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGGCGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGATGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCCAAAACCTGTACAAGAAGTACTGCCAGCTGAACAGCCTGTCCACGCTGAAGGACATCCACTCGCAGGAGGACATTTTCCCTTGGTCGCAAGGGCCGAGCTTGGCGCTGCGCGAAGCGCTTCAGCTCGGCAACCTGGACGCCTCGATACCGGGACATCAGTGGCAACTACCCGCAAGGCGGGCAAGCCGGTCGAGGCCGACCTGGCGGACGAGACGAAGAAGCTGATCCGGCACCAGAAGCTGCTGCAGGACAAGTACCAGAAGGACTTTCTTCGGGCTGGCGCTGCACGCGATGGTGCGCAAGCTGCTGCAGCTCGGGGGACAGCGGTACG ]
[+] EMBL BX608564 [ TGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGGCGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGATGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCCAAAACCTGTACAAGAAGTACTGCCAGCTGAACAGCCTGTCCACGCTGAAGGACATCCACTCGCAGGAGGACGACTTCC T GTCGCA GGCCGAGC TGGCGCTGCGCGAAGCGCTTCAGCTCGGCAACCTGGACGCCTCGATACC GGACATCAGTGGCAACTA CCGCAAGGCGGGCAAGCCGGTCGAGGCCGACCTGGCGGACGAGACGAAGAAGCTGATCCGGCACCAGAAGCTGCTGCAGGACAAGTACCAGAAGGAC TTCTTCGGGCTGGCGCTGCACGCGATGGTGCGCAAGCTGCTGCAGCTCGGGGACCAGCGGTACGCGGAGAAGCTCAAGAGCGAGTTCCGCATGTCCGACCGGCGCTTCTGGTGGCTGCGGGTGCAGACGTACGCGGACAACTACCAGTGGGAGGAGCTGGAGAAGCTCGGCCGGGCGAAGAAGAGCGCGATCGGGTACGAACCGTTCGTCGAGGTGTGCCTGGCGAAGCAGAACGTGACCGAGGCGAAAAAGTATCTGCCCCGGTGCGGCGAGGAAACGAAGCTGAAGTGGTATCTGCGGGCGGGTTGCTATGCCGATGCGGCGACCATCGCGTTCATGCAGAAGGACATCGACAGCTTGCTGAAGAT ]
[+] EMBL BX611343 [ CTGCTGCAGCTCGCGGACCAGCGGTACGCGGAGAAGCTCAAGAGCGAGTTCCGCATGTCCGACCGGCGCTTCTGGTGGCTGCGGGTGCAGACGTACGCGGACAACTACCAGTGGGAGGAGCTGGAGAAGCTCGGCCGGGCGAAGAAGAGCGCGATCGGGTACGAACCGTTCGTCGAGGTGTGCCTGGCGAAGCAGAACGTGACCGAGGCGAAAAAGTATCTGCCCCGGTGCGGCGAGGAAACGAAGCTGAAGTGGTATCTGCGGGCGGGTTGCTATGCCGATGCGGCGACCATCGCGTTCATGCAGAAGGACATCGACAGCTTGCTGAAGATTCACGACCACTGCAACGATTCCGCGCTGATGGCAAAGGTCGAAAACATGATCGGGCAGCTGTCCAGCAAGAAATAATGCGAGTCAGAAAAGGGCGAGGCGTGTTGAACCGTGATATCAGATAGACGCGAAGGATATATTAGTATATGTGTGTATGTGTTTTTTTATAAGTTTATATCTTTATATGT ]
[-] EMBL BX626217 [ CAGACGTACGCGGACAACTACCAGTGGGAGGAGCTGGAGAAGCTCGGCCGGGCGAAGAAGAGCGCGATCGGGTACGAACCGTTCGTCGAGGTGTGCCTGGCGAAGCAGAACGTGACCGAGGCGAAAAAGTATCTGCCCCGGTGCGGCGAGGAAACGAAGCTGAAGTGGTATCTGCGGGCGGGTTGCTATGCCGATGCGGCGACCATCGCGTTCATGCAGAAGGACATCGACAGCTTGCTGAAGATTCACGACCACTGCAACGATTCCGCGCTGATGGCAAAGGTCGAAAACATGATCGGGCAGCTGTCCAGCAAGAAATAATGCGAGTCAGAAAAGGGCGAGGCGTGTTGAACCGTGATATCAGATAGACGCGAAGGATATATTAGTATATGTGTGTATGTGTTTTTTTATAAGTTTATATCTTTATATGTTTTGTAATCATCATTGTGCAGCCAAAGTGCTCCCGGTAGTAGGTTAAGGTTTAGCAAGCAAGCATGTGTAAATGTTATTACTCCATTCCCTTTTCGCTCGCAGTAGACTCACCAACGCTGTCAGCAGACAATTAGAGCTAGCGAGTACAGTACAGTTCAGTGTAATATCGAAGCGAATATACGCCGCAAAAGTAANGAATCAA]
[+] EMBL BX612543 [ ACGAACCGTTCGTCGAGGTGTGCCTGGCGAAGCAGAACGTGACCGAGGCGAAAAAGTATCTGCCCCGGTGCGGCGAGGAAACGAAGCTGAAGTGGTATCTGCGGGCGGGTTGCTATGCCGATGCGGCGACCATCGCGTTCATGCAGAAGGACATCGACAGCTTGCTGAAGATTCACGACCACTGCAACGATTCCGCGCTGATGGCAAAGGTCGAAAACATGATCGGGCAGCTGTCCAGCAAGAAATAATGCGAGTCAGAAAAGGGCGAGGCGTGTTGAACCGTGATATCAGATAGACGCGAAGGATATATTAGTATATGTGTGTATGTGTTTTTTTATAAGTTTATATCTTTATATGTTTTGTAATCATCATTGTGCAGCCAAAGTGCTCCCGGTAGTAGGTTAAGGTTTAGCAAGCAAGCATGTGTAAATGTTATTACTCCATTCCCTTTTCGCTCGCAGTAGACTCACCAACGCTGTCAGCAGACAATTAGAGCTAGCGAGTACAGTACAGTTCAGTGTAATATCGAAGCGAATATACGCCGCAAAAtataacg ]
consensusID : consensus_7445#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence
[CCGCGATGTGCCGCACGCTCAAGGTGCTGAATGTGCTGCGCGACCGGAACGTCGGCATCCCGATCACCATACAGCAGTTCAACCATCTGCAGCCGGTCGTTATACTGGATCGGCTTGTGTTCCGCAAGTACTACGGGCTGGCGATCCACATCGCCAAGTATCTGAAGCTGCAGGAGACGCGCATCCTGGAGCATTGGGCGTTCCAGAAGATTACGCACGACAAGAACGATGACGAGGTGGCGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGAACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGATGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGGCGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGATGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCCAAAACCTTGTACAAGAAGTACTGCCAG]
[+] EMBL BM593043 [CCGCGATGTGCCGCACGCTCAAGGTGCTGAATGTGCTGCGCGACCGGAACGTCGGCATCCCGATCACCATACAGCAGTTCAACCATCTGCAGCCGGTCGTTATACTGGATCGGCTTGTGTTCCGCAAGTACTACGGGCTGGCGATCCACATCGCCAAGTATCTGAAGCTGCAGGAGACGCGCATCCTGGAGCATTGGGCGTTCCAGAAGATTACGCACGACAAGAACGATGACGAGGTGGCGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGAACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGATGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGGCGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGATGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCCAAAACCTTGTACAAGAAGTACTGCCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7445#0 ------------------------------------------------------------
consensus_7445#1 CCGCGATGTGCCGCACGCTCAAGGTGCTGAATGTGCTGCGCGACCGGAACGTCGGCATCC 60
consensus_7445#0 ------------------------------------------------------------
consensus_7445#1 CGATCACCATACAGCAGTTCAACCATCTGCAGCCGGTCGTTATACTGGATCGGCTTGTGT 120
consensus_7445#0 ------------------------------------------------------------
consensus_7445#1 TCCGCAAGTACTACGGGCTGGCGATCCACATCGCCAAGTATCTGAAGCTGCAGGAGACGC 180
consensus_7445#0 ----------------------CCGCTTAACGCCCTCCTTTGCAGACGATGACGAGGTGG 38
consensus_7445#1 GCATCCTGGAGCATTGGGCGTTCCAGAAGATTACGCACGACAAGAACGATGACGAGGTGG 240
** * * * ***************
consensus_7445#0 CGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGA 98
consensus_7445#1 CGCGCAAGATAGCGGCCAAATTCTCTAGCGCCGGCCTGCGCGAACCGATGTCGTACGCGA 300
************************************************************
consensus_7445#0 ACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGA 158
consensus_7445#1 ACGTGGCCGACAAAGCGCAGCAGATCGGCAAAACGAAGCTCGCCATTACGCTGCTCGAGA 360
************************************************************
consensus_7445#0 TGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGG 218
consensus_7445#1 TGGAGACGAAGAAGAAGCTGCAGGTGCCGCTGCTGCTGAAGCTCGGCGCGTGCGAGAAGG 420
************************************************************
consensus_7445#0 CGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGA 278
consensus_7445#1 CGCTGATTGCCGCCACCCAGTCGGGCGACATCGATCTCATCTACATGGCGATCCTCGAGA 480
************************************************************
consensus_7445#0 TGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCC 338
consensus_7445#1 TGAAGAACACGACCGCGCTCGCCAAGTTCCACATGACGATCCGGCGCTACCCGCTCGCCC 540
************************************************************
consensus_7445#0 AAAACCT-GTACAAGAAGTACTGCCAGCTGAACAGCCTGTCCACGCTGAAGGACATCCAC 397
consensus_7445#1 AAAACCTTGTACAAGAAGTACTGCCAG--------------------------------- 567
******* *******************
consensus_7445#0 TCGCAGGAGGACGACTTCCTGTCGCAGGCCGAGCTGGCGCTGCGCGAAGCGCTTCAGCTC 457
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GGCAACCTGGACGCCTCGATACCGGACATCAGTGGCAACTACCGCAAGGCGGGCAAGCCG 517
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GTCGAGGCCGACCTGGCGGACGAGACGAAGAAGCTGATCCGGCACCAGAAGCTGCTGCAG 577
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GACAAGTACCAGAAGGACTTCTTCGGGCTGGCGCTGCACGCGATGGTGCGCAAGCTGCTG 637
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 CAGCTCGGGGACCAGCGGTACGCGGAGAAGCTCAAGAGCGAGTTCCGCATGTCCGACCGG 697
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 CGCTTCTGGTGGCTGCGGGTGCAGACGTACGCGGACAACTACCAGTGGGAGGAGCTGGAG 757
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 AAGCTCGGCCGGGCGAAGAAGAGCGCGATCGGGTACGAACCGTTCGTCGAGGTGTGCCTG 817
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GCGAAGCAGAACGTGACCGAGGCGAAAAAGTATCTGCCCCGGTGCGGCGAGGAAACGAAG 877
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 CTGAAGTGGTATCTGCGGGCGGGTTGCTATGCCGATGCGGCGACCATCGCGTTCATGCAG 937
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 AAGGACATCGACAGCTTGCTGAAGATTCACGACCACTGCAACGATTCCGCGCTGATGGCA 997
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 AAGGTCGAAAACATGATCGGGCAGCTGTCCAGCAAGAAATAATGCGAGTCAGAAAAGGGC 1057
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GAGGCGTGTTGAACCGTGATATCAGATAGACGCGAAGGATATATTAGTATATGTGTGTAT 1117
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GTGTTTTTTTATAAGTTTATATCTTTATATGTTTTGTAATCATCATTGTGCAGCCAAAGT 1177
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 GCTCCCGGTAGTAGGTTAAGGTTTAGCAAGCAAGCATGTGTAAATGTTATTACTCCATTC 1237
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 CCTTTTCGCTCGCAGTAGACTCACCAACGCTGTCAGCAGACAATTAGAGCTAGCGAGTAC 1297
consensus_7445#1 ------------------------------------------------------------
consensus_7445#0 AGTACAGTTCAGTGTAATATCGAAGCGAATATACGCCGCAAAAGTAANGAATCAA 1352
consensus_7445#1 -------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||