Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7565 cluster # 7565       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7565#0 length = 1956 sequences # 4  
 consensus_7565#1 length = 852 sequences # 2  
consensus_7565#2 length = 562 sequences # 1  
consensusID : consensus_7565#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1956
fasta sequence 
                              [GTGGCCCGAGCTGCCCGTACAAGGGTGGCAAAAACTTACGCTCGTACAATCTGCTGGCCCGGCCGCTGATCACTGGCTGGGAGCGGCACAAAACGGCAGCGCGGGGCCAGAAAAAGTCTGTCGTGCTGTACCGTGCGCCCTGCGGCCGGCGGCTGCGCAATATGGCCGAGCTGCACCAGTATCTGCGGGTGACCGATTCCCCCCTGAACGTGGAGCACTTTGACTTCGATCCCGATATCCGAGCGCTGGCAACGTTCAAGGCGGAAAACGTCTTCTTCGAATGCACCGACCTGTCGTTCGGGCTCGAGCCGATGCCGGTGCACTGCGTAAACAACTACGACAACAAGCAGCCGCCGTCGTGCGAGTACTCGACCGAGCGCATCCCCACCGAAGCGTCAACCTGAACCTGGACAAAGAGTTCCTGTGCGGGTGCGACTGCGAAGATGACTGCACGGACAAGAGCAAATGCCAGTGCTGGCAGCTGACGCTGGCCGGCGCCAAGTACGGCTTGAAGTGAGAACCAGGACATCAACACGGTGGGCTACCACTACAAGCGGCTGATGAGCCATCTGTCGACCGGCATATACGAGTGCAACTCGCAGTGCAAGTGCAAGAAGGACAAATGTCTCAACCGGGTGGTGCAGAACTCGCTCCAGACGAAGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAA-CTG-ACCAGTCGGACAGGGAGGACTCGACGCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGCCATCCCCGTCGACGCACGACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAGCGGAACGGTCGTCAAGACGCGGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAATGCGGCCATGTTTGGCAAAAAGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGAATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAACGTGGAACTACAACTATGACGTGGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTTTTTTCGAGTGTAGCCAGAGGGGTGAGG-TGCCAAAGAGAACGATATAGATAGATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGACATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAACACATTCGGGCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGATCCTTCTGAAACAGATCCTTATACGATGCCAAAAACCGTAATCCCATCAGTTCGCCGTGCTTCGAGAGAAACTCCTCTATTATCGGTGGATGTGTGCTGTCCACCTCCAGCCACAGAACGACATCTTTGGCGAGATGTCGGCCCGCTATCCGCAGGATGGCCTTTATCACAGTCAAACCATCGTTCCCGCCGTCCAGCGCGCGC]

[+] EMBL CNS08WKR             [GTGGCCCGAGCTGCCCGTACAAGGGTGGCAAAAACTTACGCTCGTACAATCTGCTGGCCCGGCCGCTGATCACTGGCTGGGAGCGGCACAAAACGGCAGCGCGGGGCCAGAAAAAGTCTGTCGTGCTGTACCGTGCGCCCTGCGGCCGGCGGCTGCGCAATATGGCCGAGCTGCACCAGTATCTGCGGGTGACCGATTCCCCCCTGAACGTGGAGCACTTTGACTTCGATCCCGATATCCGAGCGCTGGCAACGTTCAAGGCGGAAAACGTCTTCTTCGAATGCACCGACCTGTCGTTCGGGCTCGAGCCGATGCCGGTGCACTGCGTAAACAACTACGACAACAAGCAGCCGCCGTCGTGCGAGTACTCGACCGAGCGCATCCCCACCGAAGCGTCAACCTGAACCTGGACAAAGAGTTCCTGTGCGGGTGCGACTGCGAAGATGACTGCACGGACAAGAGCAAATGCCAGTGCTGGCAGCTGACGCTGGCCGGCGCCAAGTACGGCTTGAAGTGAGAACCAGGACATCAACACGGTGGGCTACCACTACAAGCGGCTGATGAGCCATCTGTCGACCGGCATATACGAGTGCAACTCGCAGTGCAAGTGCAAGAAGGACAAATGTCTCAACCGGGTGGTGCAGAACTCGCTCCAGACGAAGCTGCAGGTGTACAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAA GGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAA CTG ACCAGTCGGACAGGGAGGACTCGACGCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX606218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGAAG GAGAACCAGGACATCAACACGGTGGGCTACCACTACAAGCGGCTGATGAGCCATCTGTCGACCGGCATATACGAGTGCAACGTGCAGTGCAAGTGCAAGAAGGACAAATGTCTCAACCGGGTGGTGCAGAACTCGCTCCAGACGAAGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAAGCGT ACCAGTCGGACAGGGAGGACTCGACGCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGCCATCCCCGTCGACGCACGACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAGCGGAACGGTCGTCAAGACGCGGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAATGCGGCCATGTTTGGCAAAAAGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGAATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08WKS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGCTCCAGACGAAGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAA TTGTACCAGTCGGACAGGGAGGACTCGACGCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGCCATCCCCGTCAACGCACAACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAGCGGAACGGTCGTCAAGAAAAGGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAATGCGGCCATTTTTGGCAAAAAGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGAATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGCTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAACGTGGAACTACAACTATGACGTGGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTTTTTTCGAGTGTAGCCAGAGGGGTGAGG TGCC                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BX611770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACGTGGAACTACAACTATGACGTCGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTATTTTCGAGTGTAGCCAGAGGGGTAAGGCTGCCAAAGAGAACGATATAGATAGATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGACATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAACACATTCGGGCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGATCCTTCTGAAACAGATCCTTATACGATGCCAAAAACCGTAATCCCATCAGTTCGCCGTGCTTCGAGAGAAACTCCTCTATTATCGGTGGATGTGTGCTGTCCACCTCCAGCCACAGAACGACATCTTTGGCGAGATGTCGGCCCGCTATCCGCAGGATGGCCTTTATCACAGTCAAACCATCGTTCCCGCCGTCCAGCGCGCGC]




>consensus_7565#0
GTGGCCCGAGCTGCCCGTACAAGGGTGGCAAAAACTTACGCTCGTACAATCTGCTGGCCC
GGCCGCTGATCACTGGCTGGGAGCGGCACAAAACGGCAGCGCGGGGCCAGAAAAAGTCTG
TCGTGCTGTACCGTGCGCCCTGCGGCCGGCGGCTGCGCAATATGGCCGAGCTGCACCAGT
ATCTGCGGGTGACCGATTCCCCCCTGAACGTGGAGCACTTTGACTTCGATCCCGATATCC
GAGCGCTGGCAACGTTCAAGGCGGAAAACGTCTTCTTCGAATGCACCGACCTGTCGTTCG
GGCTCGAGCCGATGCCGGTGCACTGCGTAAACAACTACGACAACAAGCAGCCGCCGTCGT
GCGAGTACTCGACCGAGCGCATCCCCACCGAAGCGTCAACCTGAACCTGGACAAAGAGTT
CCTGTGCGGGTGCGACTGCGAAGATGACTGCACGGACAAGAGCAAATGCCAGTGCTGGCA
GCTGACGCTGGCCGGCGCCAAGTACGGCTTGAAGTGAGAACCAGGACATCAACACGGTGG
GCTACCACTACAAGCGGCTGATGAGCCATCTGTCGACCGGCATATACGAGTGCAACTCGC
AGTGCAAGTGCAAGAAGGACAAATGTCTCAACCGGGTGGTGCAGAACTCGCTCCAGACGA
AGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGC
CGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATC
GCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCA
TCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAACTGACCAGTCGGACAGGGA
GGACTCGACGCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAA
TGGGCCATCCCCGTCGACGCACGACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAG
CGGAACGGTCGTCAAGACGCGGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAA
TGCGGCCATGTTTGGCAAAAAGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGT
CAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTCCGGCGGACCGAACGATGA
GTCGCTGTTCCGCAAGCTGTACGGCGAGAATGAGCATATCTACGTGATGGACGCGAAAAA
ATCGGGCAACCTTGGCCGGTACTTTAACCACTCCTGCAATCCTAATCTCTTCGTCCAGAA
CGTGTTTGTCGATACGCACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAA
CATTACAGCCGGTACGGAATTAACGTGGAACTACAACTATGACGTGGGTTCCGTCAACGG
AAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGT
TATTCGTTTCTATACGAGAATAAAGCTTTTTTCGAGTGTAGCCAGAGGGGTGAGGTGCCA
AAGAGAACGATATAGATAGATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTC
GAAAACGTATAATTTAACAGACATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTT
ATGCTCAACTAACACATTCGGGCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATT
TCCACGAAGCGATCCTTCTGAAACAGATCCTTATACGATGCCAAAAACCGTAATCCCATC
AGTTCGCCGTGCTTCGAGAGAAACTCCTCTATTATCGGTGGATGTGTGCTGTCCACCTCC
AGCCACAGAACGACATCTTTGGCGAGATGTCGGCCCGCTATCCGCAGGATGGCCTTTATC
ACAGTCAAACCATCGTTCCCGCCGTCCAGCGCGCGC

consensusID : consensus_7565#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 852
fasta sequence 
                              [CGAGTAATATTATTGCTTTGCACGAAAGGCGTATTTTGTTTCTACACACACTTTGCCTTTGGCTTTACCTACACAGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGAATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACGTGAGTAGAAACGGCGCTGCCTTTACCTCCTACGTTGCAAACGATTTAACTGTCTTTTTATTTATATGTTTTGGCTACCCTATGCTCTTCCATCTCCGCTCCCCCCCCCCCTCCCTTCCACACCGCAGCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAACGTGGAACTACAACTATGACGTCGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTATTTTCGAGTGTAGCCCAGAGGGGTAAGGCTGCCAAAGAGAACGATATAGATAGATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGACATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAACACATTCGGGCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGATCCTTAAGAAACAGATCCTTA]

[+] EMBL BX611769             [CGAGTAATATTATTGCTTTGCACGAAAGGCGTATTTTGTTTCTACACACACTTTGCCTTTGGCTTTACCTACACAGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGAATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACGTGAGTAGAAACGGCGCTGCCTTTACCTCCTACGTTGCAAACGATTTAACTGTCTTTTTATTTATATGTTTTGGCTACCCTATGCTCTTCCATCTCCGCTCCCCCCCCCCCTCCCTTCCACACCGCAGCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAACGTGGAACTACAACTATGACGTCGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTATTTTCGAGTGTAGCCCAGAGGGGTAAGGCTGCCAAAGAGAACGATATAGATAGATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGACATGTTGACACTGCAATTATCT                                                                                                              ]
[-] EMBL BX612470             [                                                                                                                                                                                                                                                                                                                                                                   CACACCGCAGCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAACGTGGAACTACAACTATGACGTCGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTATTTTCGAGTGTAG CCAGAGGGGTAAGGCTGCCAAAGAGAACGATATAGATAGATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGACATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAACACATTCGGGCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGATCCTTAAGAAACAGATCCTTA]




>consensus_7565#1
CGAGTAATATTATTGCTTTGCACGAAAGGCGTATTTTGTTTCTACACACACTTTGCCTTT
GGCTTTACCTACACAGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATG
ATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGAAT
GAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACGTG
AGTAGAAACGGCGCTGCCTTTACCTCCTACGTTGCAAACGATTTAACTGTCTTTTTATTT
ATATGTTTTGGCTACCCTATGCTCTTCCATCTCCGCTCCCCCCCCCCCTCCCTTCCACAC
CGCAGCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATC
TGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAA
CGTGGAACTACAACTATGACGTCGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTG
GCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAA
AGCTATTTTCGAGTGTAGCCCAGAGGGGTAAGGCTGCCAAAGAGAACGATATAGATAGAT
AGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGA
CATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAACACATTCGG
GCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGATCCTTAAGA
AACAGATCCTTA

consensusID : consensus_7565#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence 
                              [CCCCGAGGTTACGGGTGGTGCAGAACTCGCTCCAGACGAAGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAAGCGTACCAGTCGGACAGGGAGGACTCGACTCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGCCATCCCCGTCGACGCACGACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAGCGGAACGGTCGTCAAGACGCGGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAATGCGGCCATGTTTGGCAAAAAGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTC]

[+] EMBL AL692582             [CCCCGAGGTTACGGGTGGTGCAGAACTCGCTCCAGACGAAGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAGCGGAAGCGTACCAGTCGGACAGGGAGGACTCGACTCCGGCCGGCAATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGCCATCCCCGTCGACGCACGACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAGCGGAACGGTCGTCAAGACGCGGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAATGCGGCCATGTTTGGCAAAAAGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACATGATGGACGCGTC]




>consensus_7565#2
CCCCGAGGTTACGGGTGGTGCAGAACTCGCTCCAGACGAAGCTGCAGGTGTTCAACACGC
ACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGCCGAAGGGTAGCTTCATCTGCA
TCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATCGCATCTGCGCCATGAGCGACG
ACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCATCGAAACGGTGGAAAAGAGCA
AGGCGGACTACGAAGCGGAAGCGTACCAGTCGGACAGGGAGGACTCGACTCCGGCCGGCA
ATGCGAACGATTCGGACGCGTCGGACGATGCGATCGAGAATGGGCCATCCCCGTCGACGC
ACGACTCGGACGAGGAGTACACGACGAAAAGCAAACCGAGCGGAACGGTCGTCAAGACGC
GGGCCCAGCTGCGAAAGGCCAGCACTACGGAGCGACCGAATGCGGCCATGTTTGGCAAAA
AGTCATCCAACGACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCG
AGATGGACATGATGGACGCGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7565#0      GTGGCCCGAGCTGCCCGTACAAGGGTGGCAAAAACTTACGCTCGTACAATCTGCTGGCCC 60
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GGCCGCTGATCACTGGCTGGGAGCGGCACAAAACGGCAGCGCGGGGCCAGAAAAAGTCTG 120
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TCGTGCTGTACCGTGCGCCCTGCGGCCGGCGGCTGCGCAATATGGCCGAGCTGCACCAGT 180
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      ATCTGCGGGTGACCGATTCCCCCCTGAACGTGGAGCACTTTGACTTCGATCCCGATATCC 240
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GAGCGCTGGCAACGTTCAAGGCGGAAAACGTCTTCTTCGAATGCACCGACCTGTCGTTCG 300
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GGCTCGAGCCGATGCCGGTGCACTGCGTAAACAACTACGACAACAAGCAGCCGCCGTCGT 360
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GCGAGTACTCGACCGAGCGCATCCCCACCGAAGCGTCAACCTGAACCTGGACAAAGAGTT 420
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CCTGTGCGGGTGCGACTGCGAAGATGACTGCACGGACAAGAGCAAATGCCAGTGCTGGCA 480
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GCTGACGCTGGCCGGCGCCAAGTACGGCTTGAAGTGAGAACCAGGACATCAACACGGTGG 540
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      -CGAGTAATATTATTGCTTTGCACGAAAGGCGTATTTTGTTTCTACACACACTTTGCCTT 59
                                                                                  

consensus_7565#0      GCTACCACTACAAGCGGCTGATGAGCCATCTGTCGACCGGCATATACGAGTGCAACTCGC 600
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      TGGCTTTACCTACACAGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACAT 119
                                                                                  

consensus_7565#0      AGTGCAAGTGCAAGAAGGACAAATGTCTCAACCGGGTGGTGCAGAACTCGCTCCAGACGA 660
consensus_7565#2      -----------------CCCCGAGGTTAC----GGGTGGTGCAGAACTCGCTCCAGACGA 39
consensus_7565#1      GATGGACGCGTCCGGCGGACCGA-ACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAGA 178
                                         *  *           * ** * *  **   *  *     **

consensus_7565#0      AGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGC 720
consensus_7565#2      AGCTGCAGGTGTTCAACACGCACAACAAGGGCTGGGGCATCCGCTGCCTGAACGATGTGC 99
consensus_7565#1      ATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAACG 238
                      *   ***  * * *   * * **   **    * ***** **   *** * **  *    

consensus_7565#0      CGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATC 780
consensus_7565#2      CGAAGGGTAGCTTCATCTGCATCTACGCCGGCCATCTGCTGACGGAGGAGACGAGCAATC 159
consensus_7565#1      TGAGTAGAAACGGCG-CTGCCTTTACCTCCTACGT-TGCAAACGATTTAACTGTCTTTTT 296
                       **   * * *  *  **** * ***  *   * * ***  ***    *   *     * 

consensus_7565#0      GCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCA 840
consensus_7565#2      GCATCTGCGCCATGAGCGACGACAAGTCGGGCGACGAGTACTTTGCCGATCTGGACTTCA 219
consensus_7565#1      ATTTATATGTTTTG-GCTACCCTATGCTCTTCCATCTCCGCTCCCCCCCCCCCTCCCTT- 354
                         * *  *   ** ** **   * *     * *      **   **   *    * *  

consensus_7565#0      TCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAG-CGGAACTG-ACCAGTCGGACAGG 898
consensus_7565#2      TCGAAACGGTGGAAAAGAGCAAGGCGGACTACGAAG-CGGAAGCGTACCAGTCGGACAGG 278
consensus_7565#1      CCACACCGCAGCACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGC 414
                       *  * **  * *     ****  *  *   *   * *   *  *     ****    * 

consensus_7565#0      GAGGACT-CGACGCCGGCCGGCAA-------TGCG------AACGATTCGGACGCGTCGG 944
consensus_7565#2      GAGGACT-CGACTCCGGCCGGCAA-------TGCG------AACGATTCGGACGCGTCGG 324
consensus_7565#1      ACGATCTGCGGTTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGG 474
                        *  ** **   **    ** *        ****      ***  * * * **   ***

consensus_7565#0      A--CGATGCG--ATCGAGAATGGGCCATC---CCCGTCGACGCACGAC-TCGGACGAGGA 996
consensus_7565#2      A--CGATGCG--ATCGAGAATGGGCCATC---CCCGTCGACGCACGAC-TCGGACGAGGA 376
consensus_7565#1      AATTAACGTGGAACTACAACTATGACGTCGGTTCCGTCAACGGAAAGCATCTAACCTGCA 534
                      *    * * *  *     * *  * * **    ***** *** *   * **  **  * *

consensus_7565#0      GTACACGACGAAAAGCAAACCGAGCG--GAACGGTC-GTCAAGACGCGGGCCCAGCTGCG 1053
consensus_7565#2      GTACACGACGAAAAGCAAACCGAGCG--GAACGGTC-GTCAAGACGCGGGCCCAGCTGCG 433
consensus_7565#1      AC-TGTGGCGAAAAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACG 593
                            * *******     * ** *  **  * **    ***      *      * **

consensus_7565#0      AAAGGCCAGC-ACTACGGAGCG-ACCGAATGCGGCCATGTTTGGCAAAAAGTCATCCAAC 1111
consensus_7565#2      AAAGGCCAGC-ACTACGGAGCG-ACCGAATGCGGCCATGTTTGGCAAAAAGTCATCCAAC 491
consensus_7565#1      AGAATAAAGCTATTTTCGAGTGTAGCCCAGAGGGGTAAGGCTGCCAAAGAGAACGATATA 653
                      * *    *** * *   *** * * *  *   **  * *  ** **** **      *  

consensus_7565#0      GACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACA-- 1169
consensus_7565#2      GACGGCGTAAATGATGAGCAAGAGTGCGTCAATCTGATACCGAATCCCGAGATGGACA-- 549
consensus_7565#1      GATAG-ATAGATAGAGAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAAT 712
                      **  *  ** **   ***  **** **       *   *    *  *  * * * * *  

consensus_7565#0      -TGATGGACGCGTCCGGCGGACCGAACGATGAGTCGCTGTTCCGCAAGCTGTACGGCGAG 1228
consensus_7565#2      -TGATGGACGCGTC---------------------------------------------- 562
consensus_7565#1      TTAACAGACATGTTGACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAAC 772
                       * *  ***  **                                               

consensus_7565#0      AATGAGCATATCTACGTGATGGACGCGAAAAAATCGGGCAACCTTGGCCGGTACTTTAAC 1288
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ACATTCGGGCCCGCCTGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGAT 832
                                                                                  

consensus_7565#0      CACTCCTGCAATCCTAATCTCTTCGTCCAGAACGTGTTTGTCGATACGCACGATCTGCGG 1348
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      CCTTAAGAAACAGATCCTTA---------------------------------------- 852
                                                                                  

consensus_7565#0      TTCCCCTGGGTAGCGTTCTTTGCGGAGCGTAACATTACAGCCGGTACGGAATTAACGTGG 1408
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      AACTACAACTATGACGTGGGTTCCGTCAACGGAAAGCATCTAACCTGCAACTGTGGCGAA 1468
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      AAGGGCTGCAAGGGCCGATTGCTCTAATAAGTTATTCGTTTCTATACGAGAATAAAGCTT 1528
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TTTTCGAGTGTAGCCAGAGGGGTGAGGTGCCAAAGAGAACGATATAGATAGATAGATAGA 1588
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GAGAGAGAGAGCAATGCCATACCATGCCACTCGAAAACGTATAATTTAACAGACATGTTG 1648
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      ACACTGCAATTATCTGCACTATGTTCCTTTTTATGCTCAACTAACACATTCGGGCCCGCC 1708
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TGCCCGCCCGCCCCATTTATAGCTTAGCAATTTCCACGAAGCGATCCTTCTGAAACAGAT 1768
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CCTTATACGATGCCAAAAACCGTAATCCCATCAGTTCGCCGTGCTTCGAGAGAAACTCCT 1828
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CTATTATCGGTGGATGTGTGCTGTCCACCTCCAGCCACAGAACGACATCTTTGGCGAGAT 1888
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GTCGGCCCGCTATCCGCAGGATGGCCTTTATCACAGTCAAACCATCGTTCCCGCCGTCCA 1948
consensus_7565#2      ------------------------------------------------------------
consensus_7565#1      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GCGCGCGC 1956
consensus_7565#2      --------
consensus_7565#1      --------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)