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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7569#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1346 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAATGCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAACTGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTACGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTTTAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGAGCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCGATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCGATTGAAGGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGAGCGTAATGCTTCNCGCAACCTGATGATTTACT]
[+] EMBL BM605954 [CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAATGCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAACTGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTACGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTTTAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGAGCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCGATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCA ]
[+] EMBL BM577141 [ ccgCGCTCTTCGGCGAGCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCGATTGCGCACAAGCATTTTTAAATCGCGCGGCGTGTTTAAAGGTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGCATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACACGAACGTTCCGAACACCCGCAAATGGAACGTGCTTA ]
[+] EMBL BX621903 [ GTGTCGTTAATGGTGTGCCAATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCTTCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGTGAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGGAGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCA ]
[+] EMBL BX618897 [ CGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCGATTGAAGGAGGTAAAGTCGAATAACC ]
[+] EMBL BX620660 [ TCCAGCCCAATGTAGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATGCCGGGACGGTGCAGCCAAGCTGGAGCAGTATGTTTTCAAACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGCCTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACACTTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCAGTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACNAACGTTGTCACGCGATTGAAGGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGAGCGTAATGCTTCNCGCAACCTGATGATTTACT]
[+] EMBL BX617983 [ TCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAACGTTCCGAACACCC ]
consensusID : consensus_7569#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 380 fasta sequence
[AGGCAAGAATCGCCACGAGGTTGTAGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGCAGGTATAGTTTCTCAAACAG]
[+] EMBL BX466591 [AGGCAAGAATCGCCACGAGGTTGTAGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCAGACACGCTTAGCACGGTGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATGCACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTGCGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCACTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATTGCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGCAGGTATAGTTTCTCAAACAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7569#0 CCGCCCACGCGTCCGCCCACGCGTCCGGGAAATGTTCTGCCGACTATGGAGTGTCGCAAT 60
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 GCCCTATATGTTGCAGTTGGAAAATTTTACCATTTCGCGGAAGTTAATAGACCTCCTAAC 120
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 TGAGCCTAGAAATTTAACTATATATCAACTACTTCAGCATTTTAATGGCAGTCTATATTA 180
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 CGCCAAAATTCTTTCGCCTAAATGTAGGGCCTTCGGTATATACCAAACCTCCCATAACTT 240
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 TAAAGTTGTTTGTAATACGCACGATCTAGGCAGGCTCGCAATGTGTACGCTCTTCGGCGA 300
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 GCAAACAGTAAAGGCGCTGCTGTCTCCACATGAAACTCAGTTCACCAGTTTGATGGAGCG 360
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 ATTGCGCACAAGCATTTTTAAATCGCGCGGCGTTTTTAAAGGTGTCGTTAATGGTGTGCC 420
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 AATATTCAATCATCAACTGTTTGTGGAACTGTACGCGGCATCTTGGCTATCGGAAAATCT 480
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 TCTATCGCCCAAGGTAGCGTCCTTTTACCGAACGCATGTGCACCCATCGATGGGAAGGGT 540
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 GAGAACGCTTTTGGACAGTATAGTCATAAGCAAATGTACATACTTGACACTGGAAACGGG 600
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 AGCGCCGCACGGTATACGGCGTGCGTATAGACAGTTTCCACACCATATCCAGCCCAATGT 660
consensus_7569#1 ---------------------------------------AGGCAAGAATCGCCACGAGGT 21
* * * * * * * * **
consensus_7569#0 AGTGGATGAGTTAGGCCATAGTCCAGACGCGTTGTTTCT-GGCAGACACGCTTAGCACGG 719
consensus_7569#1 TGT-----AGTTAGGCCATAGTCCAGACGCGTTGTTTCTTGGCAGACACGCTTAGCACGG 76
** ******************************* ********************
consensus_7569#0 TGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATG 779
consensus_7569#1 TGTATAATACGGGCGTAGGGGCCAACCATTTGCTTAATTGGTTAGAGATCATGCAGCATG 136
************************************************************
consensus_7569#0 CACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTG 839
consensus_7569#1 CACCAGCGGTCGGTACCCTATTCAGTACCGTTGTATTCAAAGCGGCACCGATCGATGTTG 196
************************************************************
consensus_7569#0 CGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCA 899
consensus_7569#1 CGATGCGACATGGTTGTGCAGAAGCCACTGAACGGCTTGTCGGTTCAGCCTTTCGTCCCA 256
************************************************************
consensus_7569#0 CTGCATTCGACGAGTACGCGAACGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATT 959
consensus_7569#1 CTGCATTCGACGAGTACGCGAANGTTCCGAACACCCGCAAATGGAACGTGCTTAGCCATT 316
********************** *************************************
consensus_7569#0 GCCGTACGCTGATAT-GCCGGGACGGTGCAGCCAAGCTGG-AGCAG---TATGTTTTCAA 1014
consensus_7569#1 GCCGTACGCTGATATAGCCGGGACGGTGCAGCCAAGCTGGGAGCAGGTATAGTTTCTCAA 376
*************** ************************ ***** ** ** ****
consensus_7569#0 ACAGCTGTACGATGAATTTACCAAGACCTCCTCATTCGACGGTTGGTTGGGTGTTAACGC 1074
consensus_7569#1 ACAG-------------------------------------------------------- 380
****
consensus_7569#0 CTTTACACATGTTTTGCATCCAGACCTTTTCACGCCTAGGAAATTTCATTTATTCGACAC 1134
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 TTGGCGTATGAAACAGCAGCAAAGCATCTGGTACCTTTGCTTTTTTATTGATGCACCCCA 1194
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 GTTGATCGGGGACATGGTACGCACAATGAATGTGCTGGAAGGGACAAACGTTGTCACGCG 1254
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 ATTGAAGGAGGTAAAGTCGAATAACCAGCCGGTAAGGGTGTTGCTCGCTCGTGTCGANGA 1314
consensus_7569#1 ------------------------------------------------------------
consensus_7569#0 GCGTAATGCTTCNCGCAACCTGATGATTTACT 1346
consensus_7569#1 --------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||