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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7579#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 725 fasta sequence
[GAATTCCCCGAGGTATGGACAGATATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGCATCAGCCGCAGGCCAACATAGCGGTGTTTATGTTTCTGTTTATGCTGTGCGCGGCGGAGGTTGTGTTTATCAAGCTGCTCGGCGCTGACGTCGCTCGGAAGTGGTGATATATTCGGCACTGCANCCGGCAGCACCAACTGGCGCATCAAACGAATATATACA]
[+] EMBL AL932313 [GAATTCCCCGAGGTATGGACAGATATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGCATCAGCCGCAGGCCAACATAGCGGTGTTTATGTTTCTGTTTATGCTGTGCGCGGCGGAGGTTGTGTTTATCAAGCTGCTCGGCGCTGACGTCGCTCGGAAGTGGTGATATATTCGGCACTGCANCCGGCAGCACCAACTGGCGCATCAAACGAATATATACA]
consensusID : consensus_7579#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 709 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCG------CGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC---GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT-AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA-ACCA----AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAAACCCC-GCCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGC]
[+] EMBL BM621821 [CCGCCCACGCGTCCGCCCACGCGTCCG CGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA ACCA AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAAACCCC GCCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAA ]
[+] EMBL BM635445 [CCGCCCACGCGTCCGCCCACGCGTCCGGCGCCACGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA ACCA AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGAT ]
[+] EMBL BM576407 [ ccgaGCG CCA CGAAACATCGCTGACGTTGACGTTACTGTTCCTGGCGGTGATCATAGCCATAGGAGGAGTAGCAGCAGGAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGCACAGCCGAAAAGAGCGAAGAAGAAAAAAAAAACTGGACAAGATTATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGG ]
[+] EMBL BM622614 [ CCG CGAAACATCGCTGACGTTGACGTTACCGTTACTGGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCTTCTTGAAAGACAATCGTTCGTGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTCCCA ACCA AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAAACCCC TCCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGC ]
[+] EMBL BX627164 [ GTTCCTGGCGGTGATCATAGCCATAGGAGGAGTAGCAGCAGGAGCAACAAGTCTTCAACCTTACCTCATCGATCGTGCGAGCACAGCCGAAAAGAGCGAAGAAGAAAAAAAAAACTGGACAAGATTATTTTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTGTCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTGTTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTTGTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCCCCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAGCGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAAACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAGCTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCTAGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGC]
[+] EMBL BM590346 [ TCAACCTTACCTCATCGATCGTGCGAGTACAACCGAAAAGAGC GAAGAAAACAAAAACTGGAAGAGATTATTTTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAACAAAGTCAACCGCAGTGTCTGTGTTAAGGGGACACCTACTTT AGCCCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7579#0 ------------------------------------------------------------
consensus_7579#1 CCGCCCACGCGTCCGCCCACGCGTCCGCGAAACATCGCTGACGTTGACGTTACCGTTACT 60
consensus_7579#0 ------------------------------------------------------------
consensus_7579#1 GGCGGTGATCATAGCCATAGGAGAAGACGCAGCAGAAGCAACAAGTCTTCAACCTTACCT 120
consensus_7579#0 -------------------------------GAATTCCCCGAGGTATGGACAGA--TATT 27
consensus_7579#1 CATCGATCGTGCGAGTACAACCGAAAAGAGCGAAGAAAACAAAAACTGGAAGAGATTATT 180
*** * * **** ****
consensus_7579#0 TTTAAACAAAATGTCGTGGATCCCACCGTTGTGAAGAATAAAAGAAAGTCAACCATAGTG 87
consensus_7579#1 TTTAAACAAAATGTCTTGGATCCCAACGTTGTGAAGAATAAAAGAAAGTCAACCGCAGTG 240
*************** ********* **************************** ****
consensus_7579#0 TCTGTGTTAAGGGGACACCTACTTTAAAACCTTCTTCAAAGACACTCGTTCGCGCGCGTG 147
consensus_7579#1 TCTGTGTTAAGGGGACACCTACTTTAGC-CCTTCTTGAAAGACAATCGTTCGTGCGCGTG 299
************************** ******* ******* ******* *******
consensus_7579#0 TTCGTATAATTTCGTATGCAAATGCCGTTCGGACTGTCTTATTTTCCCCCGGGGACGTTT 207
consensus_7579#1 TTCGTATAATTTCGTATGCAAATGCCGTTTGGACTGTCTTATTTTCCCCCGGGGACGTTT 359
***************************** ******************************
consensus_7579#0 GTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGAGCGCACATCC 267
consensus_7579#1 GTGATTTCGTTCATTCGGTTCGGTACGTGCGAGTGATAAGTCGTTGTCGGGCGCACATTC 419
************************************************* ******** *
consensus_7579#0 CCAGACCAGCGCAGTGAATTCGAAGTGGAGCAGCGGGCATACAGTGACGTCTAGCGGAAG 327
consensus_7579#1 CCA-ACCA----AGTGTATTCGAAGTGGAGCAGCGAGCATACAGTGACGTCTAGCGGAAG 474
*** **** **** ****************** ************************
consensus_7579#0 CGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGGCAACCGTCGGCAACGATCAAA 387
consensus_7579#1 CGTGCAATTGACGTTCCCCAATCAAGAAGAAGGCCCCGACAACCGTCGGCAACGATCAAA 534
************************************** *********************
consensus_7579#0 ACCCCGGCCACGATCAACACACCCGGTTCTATCCAGCAAGCGTCCGCCGCTAGGTGAAAG 447
consensus_7579#1 ACCCCG-CCACGATCAACACACCCGGTTCTATCTAGCAAGCGTGCACAGCTAGGTGAAAG 593
****** ************************** ********* * * ************
consensus_7579#0 CTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCT 507
consensus_7579#1 CTCACAGCGAAGCAACATGGTACTCTCGATGCTGATGGTACAGACGCTGACAACGCTGCT 653
************************************************************
consensus_7579#0 AGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGCATCA 567
consensus_7579#1 AGAGCCGCCACCTGCGATCGGCGGCACCAAGGGCCTATCGTCGCCCGGGCAGCCGC---- 709
********************************************************
consensus_7579#0 GCCGCAGGCCAACATAGCGGTGTTTATGTTTCTGTTTATGCTGTGCGCGGCGGAGGTTGT 627
consensus_7579#1 ------------------------------------------------------------
consensus_7579#0 GTTTATCAAGCTGCTCGGCGCTGACGTCGCTCGGAAGTGGTGATATATTCGGCACTGCAN 687
consensus_7579#1 ------------------------------------------------------------
consensus_7579#0 CCGGCAGCACCAACTGGCGCATCAAACGAATATATACA 725
consensus_7579#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||