cluster # 7598

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Anopheles gambiae
cluster # 7598 cluster # 7598 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7598#0 length = 835 sequences # 6

consensus_7598#1 length = 519 sequences # 1

consensusID : consensus_7598#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 835
fasta sequence

                              [CCCCGATCATCGTCACCTTGAGCACCATCCAGCTTGCAGCATCAATCTTTCGCATACGCGCATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGCGGCACACTGT-CTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGT-CCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCTCATCGTTCATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGCTCGCGACCGACATTACGATGACACGGTACGTTCAACCGGTCTGTCTCTGGAGCTTGGAACCGAACCTGGACCTGATCGTGGGCCGCAACGGCACGGTCGTGGGCTTCGGGCTGACGGAGCACGATC-GGGTGTCGGACTATCTGCGGCAGGCCGCCATCGCTGTGGTCGATTCCTGGACGTGCATCGATAGCGACCGGCAGGTGTACGGTGCTACCCTAACCGCGAACATGTACTGTGGCGGAGGTAAAACCGGTGTGAGCGTGTGCAACCGGGACAGCGGAAGGGGGAATGTTTTTCNAGCAT]

[+] EMBL BM654381             [  CCGATCATCGTCACCTTGAGCACCATCCAGCTTGCAGCATCAATCTTTCGCATACGCGCATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGCGGCACACTGT CTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGT CCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCTCATCGTTCATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGCTCGCGACCGACATTACGATGACACGGTACGTTCAACCGGTCTGTCTCTGGAGCTTGGAACCGAACCTGGACCTGATCGTGGGCCGCAACGGCACGGTCGTGGGCTTCGGGCTGACGGAGCACGATC GGGTGTCGGACTATCTGCGGCAGG                                                                                                                                                         ]
[+] EMBL BM637777             [ccggGATCATCGTCACCTTGAGCACCATCCAGCTTGCAGCATCAATCTTTCGCATACGCGCATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAACTTCGAGTACGTGTGTGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGCGGCACACTGT CTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGTCCCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAG                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM648621             [        ccgGTCACCTTGAGCACCATCCAGCTTGCAGCATCAATCTTTCGCATACGCGCATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTACCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACCAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGCGGCACACTGT CTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGT CCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCTAGCGTCCGCTCGCAGGAGCACCACCCCGAACAGCTCATCGTTCATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGCTCGCGACCGACATTACGATGACACGGTACGTTCAACCGGTCTGTCTCTGGAGCTTGGAACCGAACCTGGACCTGATCGTGGGCCGCAACGGCACGGTCGTGGGCTTCGGGCTGACGGAGCACGATCGGGGTGTCGGACTATCTGCGGCAGGCCGCCATCGCT                                                                                                                                              ]
[+] EMBL BX626943             [                                        ATCAATCTTTCGCATACGCGCATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGCGGCACACTGT CTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGT CCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCTCATCGTTCATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGCTCGCGACCGACATTACGATGACACGGTACGTTCAACCGGTCTGTCTCTGGAGCTTGGAACCGAACCTGGACCTGATCGTGGGCCGCAACGGCACGGTCGTGGGCTTCGGGCTGACGGAGCACGATC GGGTGTCGGACTATCTGCGGCAGGNCGCCATCGCTGTGGTCGATTCCTGGACGTGCATCGATAGCGACCGGCAGGTGTACGGTGCTACCCTAACCGCGAACATGTACTGTGGCGGAGGTAAAACCGGTGTGAGCGTGTGCAACCGGGACAGCGGAAGGGGGAATGTTTTTCNAGCAT]
[+] EMBL AGA282243            [                                                                                                                                                      GAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACAATCCTTACCGCGGCACACTGT CTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGT CCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCTCATCGTTCATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGCTCGCGACCGACATTACGATGACACGGTACGTTCAACCGG                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09O80             [                                                                                                                                                                                                                                GGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACAG TA CTACCATCGGGAACAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACAATCCTTACCGCGGCACACTGTACTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGT CCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGC                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_7598#0
CCCCGATCATCGTCACCTTGAGCACCATCCAGCTTGCAGCATCAATCTTTCGCATACGCG
CATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTA
GCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACG
GTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACC
GAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAAC
TTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGCGGCACAC
TGTCTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGTCCGTGCAGGTTGGGCGC
AATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCTCATCGTT
CATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGCTCGCGACC
GACATTACGATGACACGGTACGTTCAACCGGTCTGTCTCTGGAGCTTGGAACCGAACCTG
GACCTGATCGTGGGCCGCAACGGCACGGTCGTGGGCTTCGGGCTGACGGAGCACGATCGG
GTGTCGGACTATCTGCGGCAGGCCGCCATCGCTGTGGTCGATTCCTGGACGTGCATCGAT
AGCGACCGGCAGGTGTACGGTGCTACCCTAACCGCGAACATGTACTGTGGCGGAGGTAAA
ACCGGTGTGAGCGTGTGCAACCGGGACAGCGGAAGGGGGAATGTTTTTCNAGCAT

consensusID : consensus_7598#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 519
fasta sequence

                              [ATCAGGACCATCCAGCTTGCAATAATCTTTCGTACGCACATGATCTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAGCAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGGTATGTATAAGTAAATAGTGTACTGGCAAACTGTGCACAAAAAATGGATTAATTGGTCGGTCGTCTAGCGGCACACTGTCTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGTCCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCT]

[+] EMBL BX620434             [ATCAGGACCATCCAGCTTGCAATAATCTTTCGTACGCACATGATCTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAGCAAACCAACTTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGGTATGTATAAGTAAATAGTGTACTGGCAAACTGTGCACAAAAAATGGATTAATTGGTCGGTCGTCTAGCGGCACACTGTCTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGTCCGTGCAGGTTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCT]




>consensus_7598#1
ATCAGGACCATCCAGCTTGCAATAATCTTTCGTACGCACATGATCTAGGGAATCCCCTTC
GCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTAGCACTGATTGCAGTCTTCTGTG
CGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACGGTTCCACTGGAGTGTGGAGAAC
GCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACCGAAACGAAGGAGGGCCACTGGC
CGTGGCACACGGCCATCTACCATCGGGAGCAAACCAACTTCGAGTACGTGTGCGGTGGTT
CGATCCTGGATAGAAACACGATCCTTACCGGTATGTATAAGTAAATAGTGTACTGGCAAA
CTGTGCACAAAAAATGGATTAATTGGTCGGTCGTCTAGCGGCACACTGTCTGTACACCTC
CCGCGGACTGATCAAGCTGGACCAGCTGTCCGTGCAGGTTGGGCGCAATCAGCTGTCGGA
AGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7598#0      CCCCGATCATCGTCACCTTGAGCACCATCCAGCTTGCAGCATCAATCTTTCGCATACGCG 60
consensus_7598#1      -----------------ATCAGGACCATCCAGCTTGCAA---TAATCTTTCG--TACGCA 38
                                        * ** ***************     *********  ***** 

consensus_7598#0      CATGAACTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTA 120
consensus_7598#1      CATGATCTAGGGAATCCCCTTCGCCATTCCGCAATGGTTTCGATCTTGCGGGGATTTTTA 98
                      ***** ******************************************************

consensus_7598#0      GCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACG 180
consensus_7598#1      GCACTGATTGCAGTCTTCTGTGCGATTGGCGAGGTGCGTAAAACGAACGCTCTGGATACG 158
                      ************************************************************

consensus_7598#0      GTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACC 240
consensus_7598#1      GTTCCACTGGAGTGTGGAGAACGCAAAGTGAAAACCATATACCTGGTGCAGCATGGTACC 218
                      ************************************************************

consensus_7598#0      GAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAACAAACCAAC 300
consensus_7598#1      GAAACGAAGGAGGGCCACTGGCCGTGGCACACGGCCATCTACCATCGGGAGCAAACCAAC 278
                      ************************************************** *********

consensus_7598#0      TTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCG-------- 352
consensus_7598#1      TTCGAGTACGTGTGCGGTGGTTCGATCCTGGATAGAAACACGATCCTTACCGGTATGTAT 338
                      ****************************************************        

consensus_7598#0      ------------------------------------------------------------
consensus_7598#1      AAGTAAATAGTGTACTGGCAAACTGTGCACAAAAAATGGATTAATTGGTCGGTCGTCTAG 398
                                                                                  

consensus_7598#0      CGGCACACTGTCTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGTCCGTGCAGG 412
consensus_7598#1      CGGCACACTGTCTGTACACCTCCCGCGGACTGATCAAGCTGGACCAGCTGTCCGTGCAGG 458
                      ************************************************************

consensus_7598#0      TTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGC 472
consensus_7598#1      TTGGGCGCAATCAGCTGTCGGAAGCAAGCGTCCGCTCGCAGGAGCACCACCCCGAGCAGC 518
                      ************************************************************

consensus_7598#0      TCATCGTTCATCCCGGCTTCAGCCCGAACAGCGTCACCGACGATATAGCGCTGATCAAGC 532
consensus_7598#1      T----------------------------------------------------------- 519
                      *                                                           

consensus_7598#0      TCGCGACCGACATTACGATGACACGGTACGTTCAACCGGTCTGTCTCTGGAGCTTGGAAC 592
consensus_7598#1      ------------------------------------------------------------
                                                                                  

consensus_7598#0      CGAACCTGGACCTGATCGTGGGCCGCAACGGCACGGTCGTGGGCTTCGGGCTGACGGAGC 652
consensus_7598#1      ------------------------------------------------------------
                                                                                  

consensus_7598#0      ACGATCGGGTGTCGGACTATCTGCGGCAGGCCGCCATCGCTGTGGTCGATTCCTGGACGT 712
consensus_7598#1      ------------------------------------------------------------
                                                                                  

consensus_7598#0      GCATCGATAGCGACCGGCAGGTGTACGGTGCTACCCTAACCGCGAACATGTACTGTGGCG 772
consensus_7598#1      ------------------------------------------------------------
                                                                                  

consensus_7598#0      GAGGTAAAACCGGTGTGAGCGTGTGCAACCGGGACAGCGGAAGGGGGAATGTTTTTCNAG 832
consensus_7598#1      ------------------------------------------------------------
                                                                                  

consensus_7598#0      CAT 835
consensus_7598#1      ---